RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 TYW1BQ6NUM6 668 aa8□□□□□ -1.13
VCAN-207ENST00000507162 SLC23A3Q6PIS1 610 aa8□□□□□ -1.13
VCAN-207ENST00000507162 TICAM2Q86XR7 235 aa8□□□□□ -1.13
VCAN-207ENST00000507162 TCEAL8Q8IYN2 117 aa8□□□□□ -1.13
VCAN-207ENST00000507162 DEFB119Q8N690 84 aa8□□□□□ -1.13
VCAN-207ENST00000507162 LEMD2Q8NC56 503 aa8□□□□□ -1.13
VCAN-207ENST00000507162 NCOA7Q8NI08 942 aa8□□□□□ -1.13
VCAN-207ENST00000507162 BPIFB1Q8TDL5 484 aa8□□□□□ -1.13
VCAN-207ENST00000507162 GJA10Q969M2 543 aa8□□□□□ -1.13
VCAN-207ENST00000507162 CCDC51Q96ER9 411 aa8□□□□□ -1.13
VCAN-207ENST00000507162 MAP3K14Q99558 947 aa8□□□□□ -1.13
VCAN-207ENST00000507162 UNC45AQ9H3U1 944 aa8□□□□□ -1.13
VCAN-207ENST00000507162 ANKRD17O75179 2603 aaKnown RBP8□□□□□ -1.13
VCAN-207ENST00000507162 PDCD11Q14690 1871 aaKnown RBP8□□□□□ -1.13
VCAN-207ENST00000507162 SALL3Q9BXA9 1300 aa8□□□□□ -1.13
VCAN-207ENST00000507162 ZMYM2Q9UBW7 1377 aa7.99□□□□□ -1.13
VCAN-207ENST00000507162 FAM149AA5PLN7 773 aa7.99□□□□□ -1.13
VCAN-207ENST00000507162 CCDC69A6NI79 296 aa7.99□□□□□ -1.13
VCAN-207ENST00000507162 COL4A2P08572 1712 aa7.99□□□□□ -1.13
VCAN-207ENST00000507162 DRD1P21728 446 aa7.99□□□□□ -1.13
VCAN-207ENST00000507162 ITPKAP23677 461 aa7.99□□□□□ -1.13
VCAN-207ENST00000507162 BRCC3P46736 316 aa7.99□□□□□ -1.13
VCAN-207ENST00000507162 JAK3P52333 1124 aa7.99□□□□□ -1.13
VCAN-207ENST00000507162 RUNX3Q13761 415 aa7.99□□□□□ -1.13
VCAN-207ENST00000507162 C20orf194Q5TEA3 1177 aa7.99□□□□□ -1.13
VCAN-207ENST00000507162 LYSMD4Q5XG99 296 aa7.99□□□□□ -1.13
VCAN-207ENST00000507162 TMPRSS7Q7RTY8 843 aa7.99□□□□□ -1.13
VCAN-207ENST00000507162 GPR155Q7Z3F1 870 aa7.99□□□□□ -1.13
VCAN-207ENST00000507162 FRMD1Q8N878 549 aa7.99□□□□□ -1.13
VCAN-207ENST00000507162 DAGLBQ8NCG7 672 aa7.99□□□□□ -1.13
VCAN-207ENST00000507162 CEP76Q8TAP6 659 aa7.99□□□□□ -1.13
VCAN-207ENST00000507162 SLC7A3Q8WY07 619 aa7.99□□□□□ -1.13
VCAN-207ENST00000507162 ACDQ96AP0 544 aa7.99□□□□□ -1.13
VCAN-207ENST00000507162 CHFRQ96EP1 664 aa7.99□□□□□ -1.13
VCAN-207ENST00000507162 DDX27Q96GQ7 796 aaKnown RBP7.99□□□□□ -1.13
VCAN-207ENST00000507162 CEP170P1Q96L14 293 aa7.99□□□□□ -1.13
VCAN-207ENST00000507162 PNMA5Q96PV4 448 aa7.99□□□□□ -1.13
VCAN-207ENST00000507162 KIF2CQ99661 725 aa7.99□□□□□ -1.13
VCAN-207ENST00000507162 TEKT3Q9BXF9 490 aa7.99□□□□□ -1.13
VCAN-207ENST00000507162 ATXN3LQ9H3M9 355 aa7.99□□□□□ -1.13
VCAN-207ENST00000507162 EBF3Q9H4W6 596 aa7.99□□□□□ -1.13
VCAN-207ENST00000507162 ARHGAP33O14559 1287 aa7.98□□□□□ -1.13
VCAN-207ENST00000507162 SNPHO15079 494 aa7.98□□□□□ -1.13
VCAN-207ENST00000507162 MSH4O15457 936 aa7.98□□□□□ -1.13
VCAN-207ENST00000507162 ASAP2O43150 1006 aa7.98□□□□□ -1.13
VCAN-207ENST00000507162 B4GALT5O43286 388 aa7.98□□□□□ -1.13
VCAN-207ENST00000507162 TRAPPC3O43617 180 aa7.98□□□□□ -1.13
VCAN-207ENST00000507162 SYPP08247 313 aa7.98□□□□□ -1.13
VCAN-207ENST00000507162 ARF4P18085 180 aaPredicted RBP7.98□□□□□ -1.13
VCAN-207ENST00000507162 AMPD2Q01433 879 aa7.98□□□□□ -1.13
VCAN-207ENST00000507162 FBXO43Q4G163 708 aa7.98□□□□□ -1.13
VCAN-207ENST00000507162 CCDC157Q569K6 752 aa7.98□□□□□ -1.13
VCAN-207ENST00000507162 COLEC12Q5KU26 742 aa7.98□□□□□ -1.13
VCAN-207ENST00000507162 GPR158Q5T848 1215 aa7.98□□□□□ -1.13
VCAN-207ENST00000507162 LRCH2Q5VUJ6 765 aa7.98□□□□□ -1.13
VCAN-207ENST00000507162 NAIF1Q69YI7 327 aaPredicted RBP7.98□□□□□ -1.13
VCAN-207ENST00000507162 TRIM68Q6AZZ1 485 aa7.98□□□□□ -1.13
VCAN-207ENST00000507162 SLC8B1Q6J4K2 584 aa7.98□□□□□ -1.13
VCAN-207ENST00000507162 CASC1Q6TDU7 716 aa7.98□□□□□ -1.13
VCAN-207ENST00000507162 ANO5Q75V66 913 aa7.98□□□□□ -1.13
VCAN-207ENST00000507162 NAXDQ8IW45 347 aa7.98□□□□□ -1.13
VCAN-207ENST00000507162 CCDC33Q8N5R6 958 aa7.98□□□□□ -1.13
VCAN-207ENST00000507162 SPATA18Q8TC71 538 aa7.98□□□□□ -1.13
VCAN-207ENST00000507162 SETD7Q8WTS6 366 aaKnown RBP7.98□□□□□ -1.13
VCAN-207ENST00000507162 FNBP1Q96RU3 617 aa7.98□□□□□ -1.13
VCAN-207ENST00000507162 P2RY13Q9BPV8 354 aa7.98□□□□□ -1.13
VCAN-207ENST00000507162 SMG9Q9H0W8 520 aaKnown RBP7.98□□□□□ -1.13
VCAN-207ENST00000507162 GLT8D2Q9H1C3 349 aa7.98□□□□□ -1.13
VCAN-207ENST00000507162 CXCL16Q9H2A7 254 aa7.98□□□□□ -1.13
VCAN-207ENST00000507162 PILRBQ9UKJ0 227 aa7.98□□□□□ -1.13
VCAN-207ENST00000507162 TPCN1Q9ULQ1 816 aa7.98□□□□□ -1.13
VCAN-207ENST00000507162 V9GY48 417 aaPredicted RBP7.98□□□□□ -1.13
VCAN-207ENST00000507162 KNL1Q8NG31 2342 aa7.98□□□□□ -1.13
VCAN-207ENST00000507162 AHCTF1Q8WYP5 2266 aa7.98□□□□□ -1.13
VCAN-207ENST00000507162 VWA8A3KMH1 1905 aa7.97□□□□□ -1.13
VCAN-207ENST00000507162 ADAMTS9Q9P2N4 1935 aa7.97□□□□□ -1.13
VCAN-207ENST00000507162 TEX51A0A1B0GUA7 166 aa7.97□□□□□ -1.13
VCAN-207ENST00000507162 OTOL1A6NHN0 477 aaPredicted RBP7.97□□□□□ -1.13
VCAN-207ENST00000507162 B8ZZF3 427 aa7.97□□□□□ -1.13
VCAN-207ENST00000507162 E7EWF7 191 aa7.97□□□□□ -1.13
VCAN-207ENST00000507162 PTGESO14684 152 aa7.97□□□□□ -1.13
VCAN-207ENST00000507162 RRP8O43159 456 aaKnown RBP7.97□□□□□ -1.13
VCAN-207ENST00000507162 SLC28A2O43868 658 aa7.97□□□□□ -1.13
VCAN-207ENST00000507162 CYP21A2P08686 494 aa7.97□□□□□ -1.13
VCAN-207ENST00000507162 SERPINF2P08697 491 aa7.97□□□□□ -1.13
VCAN-207ENST00000507162 DPP6P42658 865 aa7.97□□□□□ -1.13
VCAN-207ENST00000507162 CLK2P49760 499 aaKnown RBP7.97□□□□□ -1.13
VCAN-207ENST00000507162 CLCNKBP51801 687 aa7.97□□□□□ -1.13
VCAN-207ENST00000507162 EPHA5P54756 1037 aa7.97□□□□□ -1.13
VCAN-207ENST00000507162 SEC13P55735 322 aa7.97□□□□□ -1.13
VCAN-207ENST00000507162 ANTXR2P58335 489 aa7.97□□□□□ -1.13
VCAN-207ENST00000507162 PTENP60484 403 aa7.97□□□□□ -1.13
VCAN-207ENST00000507162 SEMG2Q02383 582 aa7.97□□□□□ -1.13
VCAN-207ENST00000507162 CTXN3Q4LDR2 81 aa7.97□□□□□ -1.13
VCAN-207ENST00000507162 ARHGAP15Q53QZ3 475 aa7.97□□□□□ -1.13
VCAN-207ENST00000507162 C2orf27AQ580R0 203 aa7.97□□□□□ -1.13
VCAN-207ENST00000507162 TPGS2Q68CL5 300 aa7.97□□□□□ -1.13
VCAN-207ENST00000507162 SLC27A1Q6PCB7 646 aa7.97□□□□□ -1.13
VCAN-207ENST00000507162 PCSK4Q6UW60 755 aa7.97□□□□□ -1.13
VCAN-207ENST00000507162 TMTC3Q6ZXV5 915 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms