RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 ARNTL2Q8WYA1 636 aa9.11□□□□□ -0.95
PDGFC-205ENST00000506880 DUSP9Q99956 384 aaKnown RBP9.11□□□□□ -0.95
PDGFC-205ENST00000506880 C17orf80Q9BSJ5 609 aa9.11□□□□□ -0.95
PDGFC-205ENST00000506880 PDE11AQ9HCR9 933 aa9.11□□□□□ -0.95
PDGFC-205ENST00000506880 MARCH5Q9NX47 278 aa9.11□□□□□ -0.95
PDGFC-205ENST00000506880 KLK14Q9P0G3 267 aa9.11□□□□□ -0.95
PDGFC-205ENST00000506880 DNAJB4Q9UDY4 337 aa9.11□□□□□ -0.95
PDGFC-205ENST00000506880 FAM50BQ9Y247 325 aa9.11□□□□□ -0.95
PDGFC-205ENST00000506880 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.11□□□□□ -0.95
PDGFC-205ENST00000506880 ATG2AQ2TAZ0 1938 aa9.1□□□□□ -0.95
PDGFC-205ENST00000506880 LRRIQ3A6PVS8 624 aaPredicted RBP9.1□□□□□ -0.95
PDGFC-205ENST00000506880 TISP43B9A030 160 aa9.1□□□□□ -0.95
PDGFC-205ENST00000506880 BIN1O00499 593 aa9.1□□□□□ -0.95
PDGFC-205ENST00000506880 SOX1O00570 391 aaPredicted RBP9.1□□□□□ -0.95
PDGFC-205ENST00000506880 MEFVO15553 781 aaPredicted RBP9.1□□□□□ -0.95
PDGFC-205ENST00000506880 HUS1O60921 280 aa9.1□□□□□ -0.95
PDGFC-205ENST00000506880 ASS1P00966 412 aaKnown RBP9.1□□□□□ -0.95
PDGFC-205ENST00000506880 NFICP08651 508 aa9.1□□□□□ -0.95
PDGFC-205ENST00000506880 DLATP10515 647 aaKnown RBP9.1□□□□□ -0.95
PDGFC-205ENST00000506880 MYOGP15173 224 aa9.1□□□□□ -0.95
PDGFC-205ENST00000506880 CD44P16070 742 aaKnown RBP9.1□□□□□ -0.95
PDGFC-205ENST00000506880 CLCNKBP51801 687 aa9.1□□□□□ -0.95
PDGFC-205ENST00000506880 YWHAHQ04917 246 aaPredicted RBP9.1□□□□□ -0.95
PDGFC-205ENST00000506880 NCOA4Q13772 614 aa9.1□□□□□ -0.95
PDGFC-205ENST00000506880 NFE2Q16621 373 aaPredicted RBP9.1□□□□□ -0.95
PDGFC-205ENST00000506880 MAN2A1Q16706 1144 aa9.1□□□□□ -0.95
PDGFC-205ENST00000506880 AAK1Q2M2I8 961 aa9.1□□□□□ -0.95
PDGFC-205ENST00000506880 DPCR1Q3MIW9 517 aa9.1□□□□□ -0.95
PDGFC-205ENST00000506880 CCDC40Q4G0X9 1142 aa9.1□□□□□ -0.95
PDGFC-205ENST00000506880 WDR44Q5JSH3 913 aa9.1□□□□□ -0.95
PDGFC-205ENST00000506880 ZBTB41Q5SVQ8 909 aa9.1□□□□□ -0.95
PDGFC-205ENST00000506880 SLC8B1Q6J4K2 584 aa9.1□□□□□ -0.95
PDGFC-205ENST00000506880 SV2AQ7L0J3 742 aa9.1□□□□□ -0.95
PDGFC-205ENST00000506880 TMC7Q7Z402 723 aa9.1□□□□□ -0.95
PDGFC-205ENST00000506880 UNC93AQ86WB7 457 aa9.1□□□□□ -0.95
PDGFC-205ENST00000506880 SMYD4Q8IYR2 804 aaPredicted RBP9.1□□□□□ -0.95
PDGFC-205ENST00000506880 THEM5Q8N1Q8 247 aa9.1□□□□□ -0.95
PDGFC-205ENST00000506880 EFHBQ8N7U6 833 aa9.1□□□□□ -0.95
PDGFC-205ENST00000506880 CMASQ8NFW8 434 aaPredicted RBP9.1□□□□□ -0.95
PDGFC-205ENST00000506880 SLC35C1Q96A29 364 aa9.1□□□□□ -0.95
PDGFC-205ENST00000506880 FAM212AQ96EL1 285 aa9.1□□□□□ -0.95
PDGFC-205ENST00000506880 ACBD6Q9BR61 282 aa9.1□□□□□ -0.95
PDGFC-205ENST00000506880 FUCA2Q9BTY2 467 aa9.1□□□□□ -0.95
PDGFC-205ENST00000506880 SRRTQ9BXP5 876 aaKnown RBP9.1□□□□□ -0.95
PDGFC-205ENST00000506880 ABCB6Q9NP58 842 aa9.1□□□□□ -0.95
PDGFC-205ENST00000506880 ENTPD7Q9NQZ7 604 aa9.1□□□□□ -0.95
PDGFC-205ENST00000506880 MTRRQ9UBK8 725 aa9.1□□□□□ -0.95
PDGFC-205ENST00000506880 ZMYM5Q9UJ78 669 aa9.1□□□□□ -0.95
PDGFC-205ENST00000506880 CTNND2Q9UQB3 1225 aa9.1□□□□□ -0.95
PDGFC-205ENST00000506880 MAPK8IP1Q9UQF2 711 aa9.1□□□□□ -0.95
PDGFC-205ENST00000506880 GOLGA8IPA6NC78 632 aa9.09□□□□□ -0.95
PDGFC-205ENST00000506880 C2orf71A6NGG8 1288 aa9.09□□□□□ -0.95
PDGFC-205ENST00000506880 CASTOR2A6NHX0 329 aa9.09□□□□□ -0.95
PDGFC-205ENST00000506880 GOLGA8JA6NMD2 632 aa9.09□□□□□ -0.95
PDGFC-205ENST00000506880 GABRDO14764 452 aa9.09□□□□□ -0.95
PDGFC-205ENST00000506880 TBC1D4O60343 1298 aa9.09□□□□□ -0.95
PDGFC-205ENST00000506880 PHACTR2O75167 634 aa9.09□□□□□ -0.95
PDGFC-205ENST00000506880 AFPP02771 609 aaKnown RBP9.09□□□□□ -0.95
PDGFC-205ENST00000506880 ITGB3P05106 788 aa9.09□□□□□ -0.95
PDGFC-205ENST00000506880 HNRNPA1P09651 372 aaKnown RBP eCLIP9.09□□□□□ -0.95
PDGFC-205ENST00000506880 CASP4P49662 377 aa9.09□□□□□ -0.95
PDGFC-205ENST00000506880 ZNF165P49910 485 aa9.09□□□□□ -0.95
PDGFC-205ENST00000506880 GATMP50440 423 aa9.09□□□□□ -0.95
PDGFC-205ENST00000506880 AFF1P51825 1210 aaKnown RBP9.09□□□□□ -0.95
PDGFC-205ENST00000506880 ZNF445P59923 1031 aa9.09□□□□□ -0.95
PDGFC-205ENST00000506880 TNNC1P63316 161 aa9.09□□□□□ -0.95
PDGFC-205ENST00000506880 MYL7Q01449 175 aa9.09□□□□□ -0.95
PDGFC-205ENST00000506880 SOX4Q06945 474 aaPredicted RBP9.09□□□□□ -0.95
PDGFC-205ENST00000506880 PLD1Q13393 1074 aa9.09□□□□□ -0.95
PDGFC-205ENST00000506880 RAB33AQ14088 237 aa9.09□□□□□ -0.95
PDGFC-205ENST00000506880 GRIN2CQ14957 1233 aa9.09□□□□□ -0.95
PDGFC-205ENST00000506880 PTPN14Q15678 1187 aa9.09□□□□□ -0.95
PDGFC-205ENST00000506880 MEA1Q16626 185 aa9.09□□□□□ -0.95
PDGFC-205ENST00000506880 DUSP6Q16828 381 aa9.09□□□□□ -0.95
PDGFC-205ENST00000506880 TPRNQ4KMQ1 711 aa9.09□□□□□ -0.95
PDGFC-205ENST00000506880 ZNF667Q5HYK9 610 aa9.09□□□□□ -0.95
PDGFC-205ENST00000506880 GLRA4Q5JXX5 417 aa9.09□□□□□ -0.95
PDGFC-205ENST00000506880 CDKAL1Q5VV42 579 aa9.09□□□□□ -0.95
PDGFC-205ENST00000506880 KLHL10Q6JEL2 608 aa9.09□□□□□ -0.95
PDGFC-205ENST00000506880 CCDC149Q6ZUS6 474 aa9.09□□□□□ -0.95
PDGFC-205ENST00000506880 CASP10Q92851 521 aa9.09□□□□□ -0.95
PDGFC-205ENST00000506880 FUBP3Q96I24 572 aaKnown RBP eCLIP9.09□□□□□ -0.95
PDGFC-205ENST00000506880 LRCH3Q96II8 777 aa9.09□□□□□ -0.95
PDGFC-205ENST00000506880 HPDLQ96IR7 371 aa9.09□□□□□ -0.95
PDGFC-205ENST00000506880 TNIP3Q96KP6 325 aa9.09□□□□□ -0.95
PDGFC-205ENST00000506880 TCF25Q9BQ70 676 aa9.09□□□□□ -0.95
PDGFC-205ENST00000506880 MTMR12Q9C0I1 747 aa9.09□□□□□ -0.95
PDGFC-205ENST00000506880 RAB20Q9NX57 234 aa9.09□□□□□ -0.95
PDGFC-205ENST00000506880 ZDHHC7Q9NXF8 308 aa9.09□□□□□ -0.95
PDGFC-205ENST00000506880 EHD2Q9NZN4 543 aa9.09□□□□□ -0.95
PDGFC-205ENST00000506880 SIX4Q9UIU6 781 aa9.09□□□□□ -0.95
PDGFC-205ENST00000506880 FBXL5Q9UKA1 691 aa9.09□□□□□ -0.95
PDGFC-205ENST00000506880 KIAA1257Q9ULG3 409 aa9.09□□□□□ -0.95
PDGFC-205ENST00000506880 PRG3Q9Y2Y8 225 aaPredicted RBP9.09□□□□□ -0.95
PDGFC-205ENST00000506880 MTCH2Q9Y6C9 303 aa9.09□□□□□ -0.95
PDGFC-205ENST00000506880 TSC2P49815 1807 aa9.09□□□□□ -0.95
PDGFC-205ENST00000506880 SOBPA7XYQ1 873 aa9.08□□□□□ -0.96
PDGFC-205ENST00000506880 BECN2A8MW95 431 aa9.08□□□□□ -0.96
PDGFC-205ENST00000506880 GRM6O15303 877 aa9.08□□□□□ -0.96
PDGFC-205ENST00000506880 TPM3P06753 285 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms