RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 KAT5Q92993 513 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 PCDHB18PQ96TA0 734 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 RIT2Q99578 217 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 LXNQ9BS40 222 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 ACP6Q9NPH0 428 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 AGPAT3Q9NRZ7 376 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 SMARCAL1Q9NZC9 954 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 PRDM4Q9UKN5 801 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 SLC45A1Q9Y2W3 748 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 MYLKQ15746 1914 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 PRRT4C9JH25 899 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 DDX3XO00571 662 aaKnown RBP eCLIP6.41□□□□□ -1.38
SCLT1-207ENST00000506233 CALCAP01258 141 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 ASNSP08243 561 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 TNFAIP3P21580 790 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 PROZP22891 400 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 GFPT1Q06210 699 aaPredicted RBP6.41□□□□□ -1.38
SCLT1-207ENST00000506233 ELF2Q15723 593 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 CCDC142Q17RM4 750 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 KNOP1Q1ED39 458 aaKnown RBP6.41□□□□□ -1.38
SCLT1-207ENST00000506233 LONRF2Q1L5Z9 754 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 FNDC3BQ53EP0 1204 aaKnown RBP6.41□□□□□ -1.38
SCLT1-207ENST00000506233 ALFQ53S48 1182 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 CCDC70Q6NSX1 233 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 KIAA1211LQ6NV74 962 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 SPATS2Q86XZ4 545 aaKnown RBP6.41□□□□□ -1.38
SCLT1-207ENST00000506233 CMIPQ8IY22 773 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 SLC35F6Q8N357 371 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 CSGALNACT2Q8N6G5 542 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 C19orf47Q8N9M1 422 aaKnown RBP6.41□□□□□ -1.38
SCLT1-207ENST00000506233 CCDC12Q8WUD4 166 aaPredicted RBP6.41□□□□□ -1.38
SCLT1-207ENST00000506233 CD101Q93033 1021 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 ERP27Q96DN0 273 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 TRIM44Q96DX7 344 aaPredicted RBP6.41□□□□□ -1.38
SCLT1-207ENST00000506233 MMS19Q96T76 1030 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 EPB41L4BQ9H329 900 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 SH2D4AQ9H788 454 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 ZNF395Q9H8N7 513 aaPredicted RBP6.41□□□□□ -1.38
SCLT1-207ENST00000506233 LUC7LQ9NQ29 371 aaKnown RBP6.41□□□□□ -1.38
SCLT1-207ENST00000506233 FNDC3AQ9Y2H6 1198 aaKnown RBP6.41□□□□□ -1.38
SCLT1-207ENST00000506233 NR2E1Q9Y466 385 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 SCN1AP35498 2009 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 A6NCN8 305 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 BTNL10A8MVZ5 291 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 MAP3K6O95382 1288 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 PHKA2P46019 1235 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 RBM5P52756 815 aaKnown RBP eCLIP6.41□□□□□ -1.38
SCLT1-207ENST00000506233 PTP4A2Q12974 167 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 CCDC96Q2M329 555 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 CST9Q5W186 159 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 PLA2G4FQ68DD2 849 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 TAPT1Q6NXT6 567 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 GPBP1Q86WP2 473 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 CBWD1Q9BRT8 395 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 KIFC3Q9BVG8 833 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 FUT8Q9BYC5 575 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 MLXIPQ9HAP2 919 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 ATG2AQ2TAZ0 1938 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 NFASCO94856 1347 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 E2F8A0AVK6 867 aa6.4□□□□□ -1.38
SCLT1-207ENST00000506233 GOLGA6L19H0YKK7 550 aa6.4□□□□□ -1.38
SCLT1-207ENST00000506233 EIF3DO15371 548 aaKnown RBP eCLIP6.4□□□□□ -1.38
SCLT1-207ENST00000506233 SERPINC1P01008 464 aa6.4□□□□□ -1.38
SCLT1-207ENST00000506233 HOXD8P13378 290 aaPredicted RBP6.4□□□□□ -1.38
SCLT1-207ENST00000506233 ACO1P21399 889 aaKnown RBP6.4□□□□□ -1.38
SCLT1-207ENST00000506233 MSNP26038 577 aaKnown RBP6.4□□□□□ -1.38
SCLT1-207ENST00000506233 UBA7P41226 1012 aa6.4□□□□□ -1.38
SCLT1-207ENST00000506233 HMGCS2P54868 508 aa6.4□□□□□ -1.38
SCLT1-207ENST00000506233 NPEPPSP55786 919 aa6.4□□□□□ -1.38
SCLT1-207ENST00000506233 AKAP17AQ02040 695 aaKnown RBP6.4□□□□□ -1.38
SCLT1-207ENST00000506233 IER5Q5VY09 327 aa6.4□□□□□ -1.38
SCLT1-207ENST00000506233 IQCEQ6IPM2 695 aa6.4□□□□□ -1.38
SCLT1-207ENST00000506233 C1orf228Q6PIY5 440 aa6.4□□□□□ -1.38
SCLT1-207ENST00000506233 UNC5AQ6ZN44 842 aa6.4□□□□□ -1.38
SCLT1-207ENST00000506233 CREBRFQ8IUR6 639 aa6.4□□□□□ -1.38
SCLT1-207ENST00000506233 SLFN12Q8IYM2 578 aa6.4□□□□□ -1.38
SCLT1-207ENST00000506233 COQ4Q9Y3A0 265 aa6.4□□□□□ -1.38
SCLT1-207ENST00000506233 PCDHGC5Q9Y5F6 944 aa6.4□□□□□ -1.38
SCLT1-207ENST00000506233 GREB1Q4ZG55 1949 aa6.4□□□□□ -1.38
SCLT1-207ENST00000506233 H3BQF6 201 aa6.4□□□□□ -1.38
SCLT1-207ENST00000506233 PDXKO00764 312 aa6.4□□□□□ -1.38
SCLT1-207ENST00000506233 HIP1RO75146 1068 aa6.4□□□□□ -1.38
SCLT1-207ENST00000506233 FARP2O94887 1054 aaPredicted RBP6.4□□□□□ -1.38
SCLT1-207ENST00000506233 FBXO21O94952 628 aa6.4□□□□□ -1.38
SCLT1-207ENST00000506233 ARL2P36404 184 aa6.4□□□□□ -1.38
SCLT1-207ENST00000506233 OAZ1P54368 228 aa6.4□□□□□ -1.38
SCLT1-207ENST00000506233 ZBED6P86452 979 aa6.4□□□□□ -1.38
SCLT1-207ENST00000506233 UBXN1Q04323 297 aa6.4□□□□□ -1.38
SCLT1-207ENST00000506233 BAATQ14032 418 aaPredicted RBP6.4□□□□□ -1.38
SCLT1-207ENST00000506233 GBX1Q14549 363 aa6.4□□□□□ -1.38
SCLT1-207ENST00000506233 BEND6Q5SZJ8 279 aaPredicted RBP6.4□□□□□ -1.38
SCLT1-207ENST00000506233 SRLQ86TD4 932 aa6.4□□□□□ -1.38
SCLT1-207ENST00000506233 FAM160B2Q86V87 743 aa6.4□□□□□ -1.38
SCLT1-207ENST00000506233 C4orf19Q8IY42 314 aa6.4□□□□□ -1.38
SCLT1-207ENST00000506233 DRC7Q8IY82 874 aa6.4□□□□□ -1.38
SCLT1-207ENST00000506233 ANKK1Q8NFD2 765 aa6.4□□□□□ -1.38
SCLT1-207ENST00000506233 POF1BQ8WVV4 589 aa6.4□□□□□ -1.38
SCLT1-207ENST00000506233 SYN2Q92777 582 aaPredicted RBP6.4□□□□□ -1.38
SCLT1-207ENST00000506233 RSAD1Q9HA92 442 aa6.4□□□□□ -1.38
SCLT1-207ENST00000506233 VEZTQ9HBM0 779 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms