RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 H3BRB1 525 aa12.06□□□□□ -0.48
NFKB1-205ENST00000505458 CLCN3P51790 818 aa12.06□□□□□ -0.48
NFKB1-205ENST00000505458 EIF3BP55884 814 aaKnown RBP12.06□□□□□ -0.48
NFKB1-205ENST00000505458 GSCP56915 257 aaPredicted RBP12.06□□□□□ -0.48
NFKB1-205ENST00000505458 ACVR2BQ13705 512 aa12.06□□□□□ -0.48
NFKB1-205ENST00000505458 OR6J1Q8NGC5 347 aa12.06□□□□□ -0.48
NFKB1-205ENST00000505458 FAM76AQ8TAV0 307 aa12.06□□□□□ -0.48
NFKB1-205ENST00000505458 AFG1LQ8WV93 481 aa12.06□□□□□ -0.48
NFKB1-205ENST00000505458 ALG3Q92685 438 aa12.06□□□□□ -0.48
NFKB1-205ENST00000505458 COPS5Q92905 334 aa12.06□□□□□ -0.48
NFKB1-205ENST00000505458 ERP44Q9BS26 406 aa12.06□□□□□ -0.48
NFKB1-205ENST00000505458 LHX5Q9H2C1 402 aa12.06□□□□□ -0.48
NFKB1-205ENST00000505458 TUT1Q9H6E5 874 aaKnown RBP12.06□□□□□ -0.48
NFKB1-205ENST00000505458 PLEKHA5Q9HAU0 1116 aa12.06□□□□□ -0.48
NFKB1-205ENST00000505458 ADAM21Q9UKJ8 722 aa12.06□□□□□ -0.48
NFKB1-205ENST00000505458 Q9Y3F1 56 aa12.06□□□□□ -0.48
NFKB1-205ENST00000505458 EDN1P05305 212 aa12.06□□□□□ -0.48
NFKB1-205ENST00000505458 MMP3P08254 477 aa12.06□□□□□ -0.48
NFKB1-205ENST00000505458 AXLP30530 894 aa12.06□□□□□ -0.48
NFKB1-205ENST00000505458 CYP2C19P33261 490 aa12.06□□□□□ -0.48
NFKB1-205ENST00000505458 TFAMQ00059 246 aaKnown RBP12.06□□□□□ -0.48
NFKB1-205ENST00000505458 ZBTB41Q5SVQ8 909 aa12.06□□□□□ -0.48
NFKB1-205ENST00000505458 RUFY4Q6ZNE9 571 aa12.06□□□□□ -0.48
NFKB1-205ENST00000505458 FSCN2O14926 492 aa12.06□□□□□ -0.48
NFKB1-205ENST00000505458 RNASE9P60153 205 aaKnown RBP12.06□□□□□ -0.48
NFKB1-205ENST00000505458 ZNF606Q8WXB4 792 aa12.06□□□□□ -0.48
NFKB1-205ENST00000505458 RBM41Q96IZ5 413 aaKnown RBP12.06□□□□□ -0.48
NFKB1-205ENST00000505458 C16orf70Q9BSU1 422 aa12.06□□□□□ -0.48
NFKB1-205ENST00000505458 BCO2Q9BYV7 579 aa12.06□□□□□ -0.48
NFKB1-205ENST00000505458 CISHQ9NSE2 258 aa12.06□□□□□ -0.48
NFKB1-205ENST00000505458 TRPM7Q96QT4 1865 aa12.05□□□□□ -0.48
NFKB1-205ENST00000505458 MMP8P22894 467 aa12.05□□□□□ -0.48
NFKB1-205ENST00000505458 COPS2P61201 443 aa12.05□□□□□ -0.48
NFKB1-205ENST00000505458 LMNB2Q03252 620 aa12.05□□□□□ -0.48
NFKB1-205ENST00000505458 GRIK4Q16099 956 aa12.05□□□□□ -0.48
NFKB1-205ENST00000505458 DNAAF5Q86Y56 855 aa12.05□□□□□ -0.48
NFKB1-205ENST00000505458 KATNAL2Q8IYT4 538 aa12.05□□□□□ -0.48
NFKB1-205ENST00000505458 LRRC19Q9H756 370 aa12.05□□□□□ -0.48
NFKB1-205ENST00000505458 FAN1Q9Y2M0 1017 aa12.05□□□□□ -0.48
NFKB1-205ENST00000505458 EVPLQ92817 2033 aa12.05□□□□□ -0.48
NFKB1-205ENST00000505458 GOLGA6CA6NDK9 693 aa12.05□□□□□ -0.48
NFKB1-205ENST00000505458 SYF2O95926 243 aaKnown RBP12.05□□□□□ -0.48
NFKB1-205ENST00000505458 GOLGA6DP0CG33 693 aa12.05□□□□□ -0.48
NFKB1-205ENST00000505458 RRM1P23921 792 aa12.05□□□□□ -0.48
NFKB1-205ENST00000505458 GGCXP38435 758 aa12.05□□□□□ -0.48
NFKB1-205ENST00000505458 TNFSF9P41273 254 aa12.05□□□□□ -0.48
NFKB1-205ENST00000505458 MYL6P60660 151 aa12.05□□□□□ -0.48
NFKB1-205ENST00000505458 CAV1Q03135 178 aa12.05□□□□□ -0.48
NFKB1-205ENST00000505458 MAP1SQ66K74 1059 aaPredicted RBP12.05□□□□□ -0.48
NFKB1-205ENST00000505458 THNSL1Q8IYQ7 743 aa12.05□□□□□ -0.48
NFKB1-205ENST00000505458 BBOF1Q8ND07 529 aa12.05□□□□□ -0.48
NFKB1-205ENST00000505458 FEZF2Q8TBJ5 459 aa12.05□□□□□ -0.48
NFKB1-205ENST00000505458 SCLT1Q96NL6 688 aa12.05□□□□□ -0.48
NFKB1-205ENST00000505458 GCOM2Q9BZD3 368 aaPredicted RBP12.05□□□□□ -0.48
NFKB1-205ENST00000505458 RNPEPQ9H4A4 650 aa12.05□□□□□ -0.48
NFKB1-205ENST00000505458 IFT122Q9HBG6 1241 aa12.05□□□□□ -0.48
NFKB1-205ENST00000505458 GOLGA6AQ9NYA3 693 aa12.05□□□□□ -0.48
NFKB1-205ENST00000505458 AMACRQ9UHK6 382 aa12.05□□□□□ -0.48
NFKB1-205ENST00000505458 NRCAMQ92823 1304 aa12.05□□□□□ -0.48
NFKB1-205ENST00000505458 SNAI1O95863 264 aaPredicted RBP12.04□□□□□ -0.48
NFKB1-205ENST00000505458 RPLP2P05387 115 aaKnown RBP12.04□□□□□ -0.48
NFKB1-205ENST00000505458 STAG3L1P0CL83 205 aa12.04□□□□□ -0.48
NFKB1-205ENST00000505458 GRM5P41594 1212 aa12.04□□□□□ -0.48
NFKB1-205ENST00000505458 WNT7BP56706 349 aa12.04□□□□□ -0.48
NFKB1-205ENST00000505458 SNX16P57768 344 aa12.04□□□□□ -0.48
NFKB1-205ENST00000505458 INHBEP58166 350 aa12.04□□□□□ -0.48
NFKB1-205ENST00000505458 LACTBP83111 547 aaPredicted RBP12.04□□□□□ -0.48
NFKB1-205ENST00000505458 PIGHQ14442 188 aaPredicted RBP12.04□□□□□ -0.48
NFKB1-205ENST00000505458 MROH7Q68CQ1 1323 aa12.04□□□□□ -0.48
NFKB1-205ENST00000505458 SPOPLQ6IQ16 392 aa12.04□□□□□ -0.48
NFKB1-205ENST00000505458 GSPT2Q8IYD1 628 aaKnown RBP12.04□□□□□ -0.48
NFKB1-205ENST00000505458 IQCKQ8N0W5 287 aa12.04□□□□□ -0.48
NFKB1-205ENST00000505458 EXD1Q8NHP7 514 aa12.04□□□□□ -0.48
NFKB1-205ENST00000505458 CCHCR1Q8TD31 782 aa12.04□□□□□ -0.48
NFKB1-205ENST00000505458 MAGOHBQ96A72 148 aaKnown RBP12.04□□□□□ -0.48
NFKB1-205ENST00000505458 CYFIP2Q96F07 1278 aa12.04□□□□□ -0.48
NFKB1-205ENST00000505458 KATNAL1Q9BW62 490 aa12.04□□□□□ -0.48
NFKB1-205ENST00000505458 PDZD7Q9H5P4 517 aa12.04□□□□□ -0.48
NFKB1-205ENST00000505458 DDX56Q9NY93 547 aaKnown RBP12.04□□□□□ -0.48
NFKB1-205ENST00000505458 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.04□□□□□ -0.48
NFKB1-205ENST00000505458 HMGB1P1B2RPK0 211 aaPredicted RBP12.04□□□□□ -0.48
NFKB1-205ENST00000505458 GAS8O95995 478 aa12.04□□□□□ -0.48
NFKB1-205ENST00000505458 ADCYAP1R1P41586 468 aa12.04□□□□□ -0.48
NFKB1-205ENST00000505458 AMHR2Q16671 573 aa12.04□□□□□ -0.48
NFKB1-205ENST00000505458 DUPD1Q68J44 220 aa12.04□□□□□ -0.48
NFKB1-205ENST00000505458 JAMLQ86YT9 394 aa12.04□□□□□ -0.48
NFKB1-205ENST00000505458 ARFGAP2Q8N6H7 521 aa12.04□□□□□ -0.48
NFKB1-205ENST00000505458 NLRP7Q8WX94 980 aa12.04□□□□□ -0.48
NFKB1-205ENST00000505458 FAM212AQ96EL1 285 aa12.04□□□□□ -0.48
NFKB1-205ENST00000505458 MAP2K5Q13163 448 aa12.04□□□□□ -0.48
NFKB1-205ENST00000505458 TMEM132DQ14C87 1099 aa12.04□□□□□ -0.48
NFKB1-205ENST00000505458 DNAJC24Q6P3W2 148 aa12.04□□□□□ -0.48
NFKB1-205ENST00000505458 LEKR1Q6ZMV7 388 aa12.04□□□□□ -0.48
NFKB1-205ENST00000505458 NIPA2Q8N8Q9 360 aa12.04□□□□□ -0.48
NFKB1-205ENST00000505458 SOCS4Q8WXH5 440 aa12.04□□□□□ -0.48
NFKB1-205ENST00000505458 FMO2Q99518 471 aa12.04□□□□□ -0.48
NFKB1-205ENST00000505458 NCAPGQ9BPX3 1015 aa12.04□□□□□ -0.48
NFKB1-205ENST00000505458 C11orf70Q9BRQ4 267 aa12.04□□□□□ -0.48
NFKB1-205ENST00000505458 FRMD8P1Q9BZ68 369 aaPredicted RBP12.04□□□□□ -0.48
NFKB1-205ENST00000505458 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms