RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 GSTA1P08263 222 aa18.02■□□□□ 0.48
LIN54-204ENST00000505397 MAPK4P31152 587 aa18.02■□□□□ 0.48
LIN54-204ENST00000505397 MAN1A1P33908 653 aa18.02■□□□□ 0.48
LIN54-204ENST00000505397 SLC1A1P43005 524 aa18.02■□□□□ 0.48
LIN54-204ENST00000505397 FAM160B1Q5W0V3 765 aa18.02■□□□□ 0.48
LIN54-204ENST00000505397 USP37Q86T82 979 aa18.02■□□□□ 0.48
LIN54-204ENST00000505397 MAIP1Q8WWC4 291 aa18.02■□□□□ 0.48
LIN54-204ENST00000505397 SLC12A4Q9UP95 1085 aa18.02■□□□□ 0.48
LIN54-204ENST00000505397 SCP2P22307 547 aa18.02■□□□□ 0.48
LIN54-204ENST00000505397 PTP4A2Q12974 167 aa18.02■□□□□ 0.48
LIN54-204ENST00000505397 MKRN3Q13064 507 aaKnown RBP18.02■□□□□ 0.48
LIN54-204ENST00000505397 ZNF526Q8TF50 670 aaPredicted RBP18.02■□□□□ 0.48
LIN54-204ENST00000505397 SNF8Q96H20 258 aa18.02■□□□□ 0.48
LIN54-204ENST00000505397 HERPUD2Q9BSE4 406 aa18.02■□□□□ 0.48
LIN54-204ENST00000505397 GBA2Q9HCG7 927 aaPredicted RBP18.02■□□□□ 0.48
LIN54-204ENST00000505397 NEU2Q9Y3R4 380 aa18.02■□□□□ 0.48
LIN54-204ENST00000505397 CCL15-CCL14A0A0B4J2E2 113 aa18.01■□□□□ 0.47
LIN54-204ENST00000505397 OAS1P00973 400 aaKnown RBP18.01■□□□□ 0.47
LIN54-204ENST00000505397 MYBL1P10243 752 aa18.01■□□□□ 0.47
LIN54-204ENST00000505397 CHKAP35790 457 aa18.01■□□□□ 0.47
LIN54-204ENST00000505397 CCL15Q16663 113 aa18.01■□□□□ 0.47
LIN54-204ENST00000505397 METTL7BQ6UX53 244 aa18.01■□□□□ 0.47
LIN54-204ENST00000505397 ZNF677Q86XU0 584 aa18.01■□□□□ 0.47
LIN54-204ENST00000505397 PARP9Q8IXQ6 854 aa18.01■□□□□ 0.47
LIN54-204ENST00000505397 GPD1LQ8N335 351 aa18.01■□□□□ 0.47
LIN54-204ENST00000505397 DDX27Q96GQ7 796 aaKnown RBP18.01■□□□□ 0.47
LIN54-204ENST00000505397 DNAJC25-GNG10A0A024R161 153 aa18.01■□□□□ 0.47
LIN54-204ENST00000505397 PDHXO00330 501 aa18.01■□□□□ 0.47
LIN54-204ENST00000505397 TCEA3O75764 348 aa18.01■□□□□ 0.47
LIN54-204ENST00000505397 GARTP22102 1010 aa18.01■□□□□ 0.47
LIN54-204ENST00000505397 GSCP56915 257 aaPredicted RBP18.01■□□□□ 0.47
LIN54-204ENST00000505397 CLDN10P78369 228 aa18.01■□□□□ 0.47
LIN54-204ENST00000505397 EMC2Q15006 297 aa18.01■□□□□ 0.47
LIN54-204ENST00000505397 LONRF1Q17RB8 773 aa18.01■□□□□ 0.47
LIN54-204ENST00000505397 CCDC25Q86WR0 208 aa18.01■□□□□ 0.47
LIN54-204ENST00000505397 GPRC5AQ8NFJ5 357 aa18.01■□□□□ 0.47
LIN54-204ENST00000505397 MAGEC3Q8TD91 643 aa18.01■□□□□ 0.47
LIN54-204ENST00000505397 ELMO3Q96BJ8 720 aa18.01■□□□□ 0.47
LIN54-204ENST00000505397 DCLK3Q9C098 648 aa18.01■□□□□ 0.47
LIN54-204ENST00000505397 CD248Q9HCU0 757 aa18.01■□□□□ 0.47
LIN54-204ENST00000505397 PDLIM7Q9NR12 457 aa18.01■□□□□ 0.47
LIN54-204ENST00000505397 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.01■□□□□ 0.477e-7■■■□□ 16.3
LIN54-204ENST00000505397 ADGRA3Q8IWK6 1321 aa18■□□□□ 0.47
LIN54-204ENST00000505397 TTC4O95801 387 aa18■□□□□ 0.47
LIN54-204ENST00000505397 SOX10P56693 466 aa18■□□□□ 0.47
LIN54-204ENST00000505397 RTP1P59025 263 aa18■□□□□ 0.47
LIN54-204ENST00000505397 CAV1Q03135 178 aa18■□□□□ 0.47
LIN54-204ENST00000505397 KLF1Q13351 362 aaPredicted RBP18■□□□□ 0.47
LIN54-204ENST00000505397 C2orf69Q8N8R5 385 aa18■□□□□ 0.47
LIN54-204ENST00000505397 POMGNT1Q8WZA1 660 aa18■□□□□ 0.47
LIN54-204ENST00000505397 TRIM7Q9C029 511 aa18■□□□□ 0.47
LIN54-204ENST00000505397 POLR3FQ9H1D9 316 aaPredicted RBP18■□□□□ 0.47
LIN54-204ENST00000505397 HOMER3Q9NSC5 361 aa18■□□□□ 0.47
LIN54-204ENST00000505397 SAMD15Q9P1V8 674 aa18■□□□□ 0.47
LIN54-204ENST00000505397 H0YCG3 227 aa18■□□□□ 0.47
LIN54-204ENST00000505397 MGRN1O60291 552 aa18■□□□□ 0.47
LIN54-204ENST00000505397 CYP1A1P04798 512 aaPredicted RBP18■□□□□ 0.47
LIN54-204ENST00000505397 SNX1Q13596 522 aa18■□□□□ 0.47
LIN54-204ENST00000505397 LY6KQ17RY6 165 aa18■□□□□ 0.47
LIN54-204ENST00000505397 CCDC38Q502W7 563 aa18■□□□□ 0.47
LIN54-204ENST00000505397 BRDTQ58F21 947 aaPredicted RBP18■□□□□ 0.47
LIN54-204ENST00000505397 VSTM1Q6UX27 236 aa18■□□□□ 0.47
LIN54-204ENST00000505397 FAM228AQ86W67 206 aa18■□□□□ 0.47
LIN54-204ENST00000505397 CCDC50Q8IVM0 306 aa18■□□□□ 0.47
LIN54-204ENST00000505397 GRK7Q8WTQ7 553 aa18■□□□□ 0.47
LIN54-204ENST00000505397 SLC7A3Q8WY07 619 aa18■□□□□ 0.47
LIN54-204ENST00000505397 SEPT1Q8WYJ6 367 aa18■□□□□ 0.47
LIN54-204ENST00000505397 ZNF516Q92618 1163 aa18■□□□□ 0.47
LIN54-204ENST00000505397 TRIM11Q96F44 468 aa18■□□□□ 0.47
LIN54-204ENST00000505397 ELAC2Q9BQ52 826 aaKnown RBP18■□□□□ 0.47
LIN54-204ENST00000505397 PORCNQ9H237 461 aa18■□□□□ 0.47
LIN54-204ENST00000505397 XPNPEP1Q9NQW7 623 aa18■□□□□ 0.47
LIN54-204ENST00000505397 KCNG1Q9UIX4 513 aa18■□□□□ 0.47
LIN54-204ENST00000505397 SLC45A1Q9Y2W3 748 aa18■□□□□ 0.47
LIN54-204ENST00000505397 NOP56O00567 594 aaKnown RBP18■□□□□ 0.47
LIN54-204ENST00000505397 CALCAP01258 141 aa18■□□□□ 0.47
LIN54-204ENST00000505397 KRT5P13647 590 aa18■□□□□ 0.47
LIN54-204ENST00000505397 RRM1P23921 792 aa18■□□□□ 0.47
LIN54-204ENST00000505397 ABCD1P33897 745 aa18■□□□□ 0.47
LIN54-204ENST00000505397 TCF7P36402 384 aaPredicted RBP18■□□□□ 0.47
LIN54-204ENST00000505397 CENPCQ03188 943 aa18■□□□□ 0.47
LIN54-204ENST00000505397 ILDR2Q71H61 639 aa18■□□□□ 0.47
LIN54-204ENST00000505397 CCDC91Q7Z6B0 441 aa18■□□□□ 0.47
LIN54-204ENST00000505397 FGD4Q96M96 766 aa18■□□□□ 0.47
LIN54-204ENST00000505397 PI4K2AQ9BTU6 479 aa18■□□□□ 0.47
LIN54-204ENST00000505397 NRBP2Q9NSY0 501 aa18■□□□□ 0.47
LIN54-204ENST00000505397 ASIC3Q9UHC3 531 aa18■□□□□ 0.47
LIN54-204ENST00000505397 PCDHB2Q9Y5E7 798 aa18■□□□□ 0.47
LIN54-204ENST00000505397 PLXNB2O15031 1838 aa17.99■□□□□ 0.47
LIN54-204ENST00000505397 IGKV6D-21A0A0A0MT36 114 aa17.99■□□□□ 0.47
LIN54-204ENST00000505397 LOC102724159A0A0B4J2E5 919 aa17.99■□□□□ 0.47
LIN54-204ENST00000505397 GSTTP1A0A1W2PQM5 241 aa17.99■□□□□ 0.47
LIN54-204ENST00000505397 SNX3O60493 162 aa17.99■□□□□ 0.47
LIN54-204ENST00000505397 ACSL3O95573 720 aa17.99■□□□□ 0.47
LIN54-204ENST00000505397 STAT5BP51692 787 aa17.99■□□□□ 0.47
LIN54-204ENST00000505397 ITGA8P53708 1063 aa17.99■□□□□ 0.47
LIN54-204ENST00000505397 PWP2Q15269 919 aaKnown RBP17.99■□□□□ 0.47
LIN54-204ENST00000505397 LLGL1Q15334 1064 aa17.99■□□□□ 0.47
LIN54-204ENST00000505397 SNCBQ16143 134 aa17.99■□□□□ 0.47
LIN54-204ENST00000505397 TAS1R3Q7RTX0 852 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms