RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 SPRED2Q7Z698 418 aa8.94□□□□□ -0.98
CDC42SE2-208ENST00000505065 POP1Q99575 1024 aaKnown RBP8.94□□□□□ -0.98
CDC42SE2-208ENST00000505065 SDCBP2Q9H190 292 aa8.94□□□□□ -0.98
CDC42SE2-208ENST00000505065 TSPY26PQ9H489 355 aa8.94□□□□□ -0.98
CDC42SE2-208ENST00000505065 ARMCX3Q9UH62 379 aaPredicted RBP8.94□□□□□ -0.98
CDC42SE2-208ENST00000505065 ADAM28Q9UKQ2 775 aa8.94□□□□□ -0.98
CDC42SE2-208ENST00000505065 TBKBP1A7MCY6 615 aa8.94□□□□□ -0.98
CDC42SE2-208ENST00000505065 XPOTO43592 962 aaKnown RBP8.94□□□□□ -0.98
CDC42SE2-208ENST00000505065 ABLIM3O94929 683 aa8.94□□□□□ -0.98
CDC42SE2-208ENST00000505065 RABGGTBP53611 331 aa8.94□□□□□ -0.98
CDC42SE2-208ENST00000505065 CTC1Q2NKJ3 1217 aa8.94□□□□□ -0.98
CDC42SE2-208ENST00000505065 ISM2Q6H9L7 571 aa8.94□□□□□ -0.98
CDC42SE2-208ENST00000505065 FIBCD1Q8N539 461 aa8.94□□□□□ -0.98
CDC42SE2-208ENST00000505065 EHBP1Q8NDI1 1231 aa8.94□□□□□ -0.98
CDC42SE2-208ENST00000505065 LNX1Q8TBB1 728 aaPredicted RBP8.94□□□□□ -0.98
CDC42SE2-208ENST00000505065 MYO6Q9UM54 1294 aa8.94□□□□□ -0.98
CDC42SE2-208ENST00000505065 LAMA3Q16787 3333 aa8.93□□□□□ -0.98
CDC42SE2-208ENST00000505065 A0A1W2PQJ5 194 aa8.93□□□□□ -0.98
CDC42SE2-208ENST00000505065 F8W810 466 aa8.93□□□□□ -0.98
CDC42SE2-208ENST00000505065 AFPP02771 609 aaKnown RBP8.93□□□□□ -0.98
CDC42SE2-208ENST00000505065 ZNF165P49910 485 aa8.93□□□□□ -0.98
CDC42SE2-208ENST00000505065 KCNH2Q12809 1159 aa8.93□□□□□ -0.98
CDC42SE2-208ENST00000505065 PDXDC1Q6P996 788 aa8.93□□□□□ -0.98
CDC42SE2-208ENST00000505065 TMEM86AQ8N2M4 240 aa8.93□□□□□ -0.98
CDC42SE2-208ENST00000505065 ZCWPW1Q9H0M4 648 aa8.93□□□□□ -0.98
CDC42SE2-208ENST00000505065 CYP3A43Q9HB55 503 aa8.93□□□□□ -0.98
CDC42SE2-208ENST00000505065 GINS2Q9Y248 185 aa8.93□□□□□ -0.98
CDC42SE2-208ENST00000505065 TLL1O43897 1013 aa8.93□□□□□ -0.98
CDC42SE2-208ENST00000505065 PON1P27169 355 aa8.93□□□□□ -0.98
CDC42SE2-208ENST00000505065 CDC25BP30305 580 aa8.93□□□□□ -0.98
CDC42SE2-208ENST00000505065 RBP5P82980 135 aa8.93□□□□□ -0.98
CDC42SE2-208ENST00000505065 SOWAHAQ2M3V2 549 aa8.93□□□□□ -0.98
CDC42SE2-208ENST00000505065 PKDCCQ504Y2 493 aa8.93□□□□□ -0.98
CDC42SE2-208ENST00000505065 IL37Q9NZH6 218 aa8.93□□□□□ -0.98
CDC42SE2-208ENST00000505065 KLK14Q9P0G3 267 aa8.93□□□□□ -0.98
CDC42SE2-208ENST00000505065 ATP8B3O60423 1300 aa8.93□□□□□ -0.98
CDC42SE2-208ENST00000505065 CA3P07451 260 aa8.93□□□□□ -0.98
CDC42SE2-208ENST00000505065 HNRNPH3P31942 346 aaKnown RBP8.93□□□□□ -0.98
CDC42SE2-208ENST00000505065 COPB1P53618 953 aaKnown RBP8.93□□□□□ -0.98
CDC42SE2-208ENST00000505065 PTPN14Q15678 1187 aa8.93□□□□□ -0.98
CDC42SE2-208ENST00000505065 TIGD5Q53EQ6 642 aa8.93□□□□□ -0.98
CDC42SE2-208ENST00000505065 HABP4Q5JVS0 413 aaKnown RBP8.93□□□□□ -0.98
CDC42SE2-208ENST00000505065 AOPEPQ8N6M6 819 aa8.93□□□□□ -0.98
CDC42SE2-208ENST00000505065 KIF12Q96FN5 646 aa8.93□□□□□ -0.98
CDC42SE2-208ENST00000505065 ZNF558Q96NG5 402 aa8.93□□□□□ -0.98
CDC42SE2-208ENST00000505065 TUBGCP2Q9BSJ2 902 aa8.93□□□□□ -0.98
CDC42SE2-208ENST00000505065 C17orf80Q9BSJ5 609 aa8.93□□□□□ -0.98
CDC42SE2-208ENST00000505065 EDEM3Q9BZQ6 932 aa8.93□□□□□ -0.98
CDC42SE2-208ENST00000505065 RBSNQ9H1K0 784 aa8.93□□□□□ -0.98
CDC42SE2-208ENST00000505065 NKX2-4Q9H2Z4 354 aa8.93□□□□□ -0.98
CDC42SE2-208ENST00000505065 NDST4Q9H3R1 872 aa8.93□□□□□ -0.98
CDC42SE2-208ENST00000505065 AJAP1Q9UKB5 411 aaPredicted RBP8.93□□□□□ -0.98
CDC42SE2-208ENST00000505065 SZT2Q5T011 3432 aa8.93□□□□□ -0.98
CDC42SE2-208ENST00000505065 SGSM1Q2NKQ1 1148 aa8.92□□□□□ -0.98
CDC42SE2-208ENST00000505065 SV2CQ496J9 727 aa8.92□□□□□ -0.98
CDC42SE2-208ENST00000505065 CRYBG2Q8N1P7 616 aa8.92□□□□□ -0.98
CDC42SE2-208ENST00000505065 TAS1R2Q8TE23 839 aa8.92□□□□□ -0.98
CDC42SE2-208ENST00000505065 ANKRD36BP1Q96IX9 119 aa8.92□□□□□ -0.98
CDC42SE2-208ENST00000505065 GPR62Q9BZJ7 368 aa8.92□□□□□ -0.98
CDC42SE2-208ENST00000505065 TRIM6Q9C030 488 aaPredicted RBP8.92□□□□□ -0.98
CDC42SE2-208ENST00000505065 AVENQ9NQS1 362 aaPredicted RBP8.92□□□□□ -0.98
CDC42SE2-208ENST00000505065 SPG21Q9NZD8 308 aa8.92□□□□□ -0.98
CDC42SE2-208ENST00000505065 TAS1R1Q7RTX1 841 aa8.92□□□□□ -0.98
CDC42SE2-208ENST00000505065 USP37Q86T82 979 aa8.92□□□□□ -0.98
CDC42SE2-208ENST00000505065 TIFAQ96CG3 184 aa8.92□□□□□ -0.98
CDC42SE2-208ENST00000505065 FAM81BQ96LP2 452 aa8.92□□□□□ -0.98
CDC42SE2-208ENST00000505065 ZNF560Q96MR9 790 aa8.92□□□□□ -0.98
CDC42SE2-208ENST00000505065 GOLGA2P5Q9HBQ8 144 aa8.92□□□□□ -0.98
CDC42SE2-208ENST00000505065 RAB20Q9NX57 234 aa8.92□□□□□ -0.98
CDC42SE2-208ENST00000505065 DSEQ9UL01 958 aa8.92□□□□□ -0.98
CDC42SE2-208ENST00000505065 LRFN2Q9ULH4 789 aa8.92□□□□□ -0.98
CDC42SE2-208ENST00000505065 NUB1Q9Y5A7 615 aa8.92□□□□□ -0.98
CDC42SE2-208ENST00000505065 MUC22E2RYF6 1773 aaPredicted RBP8.92□□□□□ -0.98
CDC42SE2-208ENST00000505065 FGF18O76093 207 aa8.92□□□□□ -0.98
CDC42SE2-208ENST00000505065 HLA-DRAP01903 254 aa8.92□□□□□ -0.98
CDC42SE2-208ENST00000505065 ATP1A3P13637 1013 aa8.92□□□□□ -0.98
CDC42SE2-208ENST00000505065 CREMQ03060 361 aa8.92□□□□□ -0.98
CDC42SE2-208ENST00000505065 ELAVL2Q12926 359 aaKnown RBP8.92□□□□□ -0.98
CDC42SE2-208ENST00000505065 PHLDB3Q6NSJ2 640 aa8.92□□□□□ -0.98
CDC42SE2-208ENST00000505065 TRIM65Q6PJ69 517 aa8.92□□□□□ -0.98
CDC42SE2-208ENST00000505065 FBXL13Q8NEE6 735 aa8.92□□□□□ -0.98
CDC42SE2-208ENST00000505065 KREMEN1Q96MU8 473 aa8.92□□□□□ -0.98
CDC42SE2-208ENST00000505065 COLEC11Q9BWP8 271 aa8.92□□□□□ -0.98
CDC42SE2-208ENST00000505065 AAASQ9NRG9 546 aa8.92□□□□□ -0.98
CDC42SE2-208ENST00000505065 SF3B1O75533 1304 aaKnown RBP eCLIP8.91□□□□□ -0.983e-7■■■■■ 66.4
CDC42SE2-208ENST00000505065 POMCP01189 267 aa8.91□□□□□ -0.98
CDC42SE2-208ENST00000505065 FUT10Q6P4F1 479 aa8.91□□□□□ -0.98
CDC42SE2-208ENST00000505065 UNC93AQ86WB7 457 aa8.91□□□□□ -0.98
CDC42SE2-208ENST00000505065 PDCL2Q8N4E4 241 aa8.91□□□□□ -0.98
CDC42SE2-208ENST00000505065 SHC3Q92529 594 aa8.91□□□□□ -0.98
CDC42SE2-208ENST00000505065 BAP1Q92560 729 aa8.91□□□□□ -0.98
CDC42SE2-208ENST00000505065 MRPL38Q96DV4 380 aaKnown RBP8.91□□□□□ -0.98
CDC42SE2-208ENST00000505065 GUCD1Q96NT3 240 aa8.91□□□□□ -0.98
CDC42SE2-208ENST00000505065 ARHGEF37A1IGU5 675 aa8.91□□□□□ -0.98
CDC42SE2-208ENST00000505065 C2orf71A6NGG8 1288 aa8.91□□□□□ -0.98
CDC42SE2-208ENST00000505065 LRRN2O75325 713 aa8.91□□□□□ -0.98
CDC42SE2-208ENST00000505065 CILPO75339 1184 aa8.91□□□□□ -0.98
CDC42SE2-208ENST00000505065 ITGB3P05106 788 aa8.91□□□□□ -0.98
CDC42SE2-208ENST00000505065 TRIM49P0CI25 452 aa8.91□□□□□ -0.98
CDC42SE2-208ENST00000505065 TRIM49CP0CI26 452 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms