RNA–Protein interactions for RNA: ENST00000504606.1

TRIO-206, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-206ENST00000504606 JAM2P57087 298 aa12.18□□□□□ -0.46
TRIO-206ENST00000504606 TNNC1P63316 161 aa12.18□□□□□ -0.46
TRIO-206ENST00000504606 ASIC2Q16515 512 aa12.18□□□□□ -0.46
TRIO-206ENST00000504606 SV2CQ496J9 727 aa12.18□□□□□ -0.46
TRIO-206ENST00000504606 PAN2Q504Q3 1202 aaKnown RBP12.18□□□□□ -0.46
TRIO-206ENST00000504606 TMEM240Q5SV17 173 aa12.18□□□□□ -0.46
TRIO-206ENST00000504606 SFMBT2Q5VUG0 894 aa12.18□□□□□ -0.46
TRIO-206ENST00000504606 FAM117BQ6P1L5 589 aa12.18□□□□□ -0.46
TRIO-206ENST00000504606 SCARA5Q6ZMJ2 495 aa12.18□□□□□ -0.46
TRIO-206ENST00000504606 ZNF280BQ86YH2 543 aa12.18□□□□□ -0.46
TRIO-206ENST00000504606 GPIHBP1Q8IV16 184 aa12.18□□□□□ -0.46
TRIO-206ENST00000504606 RSPH1Q8WYR4 309 aa12.18□□□□□ -0.46
TRIO-206ENST00000504606 RABGGTAQ92696 567 aa12.18□□□□□ -0.46
TRIO-206ENST00000504606 TOP1MTQ969P6 601 aa12.18□□□□□ -0.46
TRIO-206ENST00000504606 DDX27Q96GQ7 796 aaKnown RBP12.18□□□□□ -0.46
TRIO-206ENST00000504606 UROC1Q96N76 676 aa12.18□□□□□ -0.46
TRIO-206ENST00000504606 ARID3AQ99856 593 aa12.18□□□□□ -0.46
TRIO-206ENST00000504606 PAAF1Q9BRP4 392 aa12.18□□□□□ -0.46
TRIO-206ENST00000504606 NUCKS1Q9H1E3 243 aaKnown RBP12.18□□□□□ -0.46
TRIO-206ENST00000504606 MYO6Q9UM54 1294 aa12.18□□□□□ -0.46
TRIO-206ENST00000504606 NR2E3Q9Y5X4 410 aa12.18□□□□□ -0.46
TRIO-206ENST00000504606 FNDC1Q4ZHG4 1894 aaPredicted RBP12.18□□□□□ -0.46
TRIO-206ENST00000504606 SCN1AP35498 2009 aa12.18□□□□□ -0.46
TRIO-206ENST00000504606 KPNA7A9QM74 516 aa12.17□□□□□ -0.46
TRIO-206ENST00000504606 B4GALT3O60512 393 aa12.17□□□□□ -0.46
TRIO-206ENST00000504606 DGKIO75912 1065 aa12.17□□□□□ -0.46
TRIO-206ENST00000504606 GFPT2O94808 682 aa12.17□□□□□ -0.46
TRIO-206ENST00000504606 SOX5P35711 763 aa12.17□□□□□ -0.46
TRIO-206ENST00000504606 USP8P40818 1118 aa12.17□□□□□ -0.46
TRIO-206ENST00000504606 ASPAP45381 313 aa12.17□□□□□ -0.46
TRIO-206ENST00000504606 RAP1GAPP47736 663 aa12.17□□□□□ -0.46
TRIO-206ENST00000504606 OR1G1P47890 313 aa12.17□□□□□ -0.46
TRIO-206ENST00000504606 DSC1Q08554 894 aa12.17□□□□□ -0.46
TRIO-206ENST00000504606 UPP1Q16831 310 aa12.17□□□□□ -0.46
TRIO-206ENST00000504606 E4F1Q66K89 784 aaPredicted RBP12.17□□□□□ -0.46
TRIO-206ENST00000504606 TMCO2Q7Z6W1 182 aaPredicted RBP12.17□□□□□ -0.46
TRIO-206ENST00000504606 LRRC8AQ8IWT6 810 aa12.17□□□□□ -0.46
TRIO-206ENST00000504606 COLGALT2Q8IYK4 626 aa12.17□□□□□ -0.46
TRIO-206ENST00000504606 LRRC43Q8N309 656 aa12.17□□□□□ -0.46
TRIO-206ENST00000504606 SHC3Q92529 594 aa12.17□□□□□ -0.46
TRIO-206ENST00000504606 TRIM44Q96DX7 344 aaPredicted RBP12.17□□□□□ -0.46
TRIO-206ENST00000504606 FAXDC2Q96IV6 333 aa12.17□□□□□ -0.46
TRIO-206ENST00000504606 PANX2Q96RD6 677 aa12.17□□□□□ -0.46
TRIO-206ENST00000504606 MMS19Q96T76 1030 aa12.17□□□□□ -0.46
TRIO-206ENST00000504606 DNAJC7Q99615 494 aa12.17□□□□□ -0.46
TRIO-206ENST00000504606 GPR88Q9GZN0 384 aa12.17□□□□□ -0.46
TRIO-206ENST00000504606 SMYD3Q9H7B4 428 aa12.17□□□□□ -0.46
TRIO-206ENST00000504606 NRDE2Q9H7Z3 1164 aa12.17□□□□□ -0.46
TRIO-206ENST00000504606 ZNHIT6Q9NWK9 470 aaKnown RBP12.17□□□□□ -0.46
TRIO-206ENST00000504606 SNX9Q9Y5X1 595 aa12.17□□□□□ -0.46
TRIO-206ENST00000504606 PTPRSQ13332 1948 aa12.16□□□□□ -0.46
TRIO-206ENST00000504606 FOXN3O00409 490 aaPredicted RBP12.16□□□□□ -0.46
TRIO-206ENST00000504606 SPTLC1O15269 473 aa12.16□□□□□ -0.46
TRIO-206ENST00000504606 NRDCO43847 1150 aa12.16□□□□□ -0.46
TRIO-206ENST00000504606 B3GAT3O94766 335 aa12.16□□□□□ -0.46
TRIO-206ENST00000504606 WEE2P0C1S8 567 aa12.16□□□□□ -0.46
TRIO-206ENST00000504606 KRT5P13647 590 aa12.16□□□□□ -0.46
TRIO-206ENST00000504606 FERP16591 822 aa12.16□□□□□ -0.46
TRIO-206ENST00000504606 CD58P19256 250 aa12.16□□□□□ -0.46
TRIO-206ENST00000504606 YWHAEP62258 255 aaKnown RBP12.16□□□□□ -0.46
TRIO-206ENST00000504606 ARID5AQ03989 594 aa12.16□□□□□ -0.46
TRIO-206ENST00000504606 DCLRE1AQ6PJP8 1040 aa12.16□□□□□ -0.46
TRIO-206ENST00000504606 C3orf58Q8NDZ4 430 aa12.16□□□□□ -0.46
TRIO-206ENST00000504606 HERVK_113Q902F9 699 aa12.16□□□□□ -0.46
TRIO-206ENST00000504606 SYN2Q92777 582 aaPredicted RBP12.16□□□□□ -0.46
TRIO-206ENST00000504606 JAKMIP2Q96AA8 810 aa12.16□□□□□ -0.46
TRIO-206ENST00000504606 ZNF830Q96NB3 372 aaPredicted RBP12.16□□□□□ -0.46
TRIO-206ENST00000504606 BAG1Q99933 345 aaPredicted RBP12.16□□□□□ -0.46
TRIO-206ENST00000504606 BCO2Q9BYV7 579 aa12.16□□□□□ -0.46
TRIO-206ENST00000504606 SDCBP2Q9H190 292 aa12.16□□□□□ -0.46
TRIO-206ENST00000504606 CYP3A43Q9HB55 503 aa12.16□□□□□ -0.46
TRIO-206ENST00000504606 AIPL1Q9NZN9 384 aa12.16□□□□□ -0.46
TRIO-206ENST00000504606 HCSTQ9UBK5 93 aa12.16□□□□□ -0.46
TRIO-206ENST00000504606 DNAJB4Q9UDY4 337 aa12.16□□□□□ -0.46
TRIO-206ENST00000504606 PRG3Q9Y2Y8 225 aaPredicted RBP12.16□□□□□ -0.46
TRIO-206ENST00000504606 PCDHB4Q9Y5E5 795 aa12.16□□□□□ -0.46
TRIO-206ENST00000504606 CCDC172P0C7W6 258 aa12.15□□□□□ -0.46
TRIO-206ENST00000504606 SKILP12757 684 aa12.15□□□□□ -0.46
TRIO-206ENST00000504606 ACO1P21399 889 aaKnown RBP12.15□□□□□ -0.46
TRIO-206ENST00000504606 IGFBP6P24592 240 aaPredicted RBP12.15□□□□□ -0.46
TRIO-206ENST00000504606 HNRNPH3P31942 346 aaKnown RBP12.15□□□□□ -0.46
TRIO-206ENST00000504606 CDH8P55286 799 aa12.15□□□□□ -0.46
TRIO-206ENST00000504606 LILRA4P59901 499 aa12.15□□□□□ -0.46
TRIO-206ENST00000504606 MEA1Q16626 185 aa12.15□□□□□ -0.46
TRIO-206ENST00000504606 TDRD12Q587J7 1177 aaKnown RBP12.15□□□□□ -0.46
TRIO-206ENST00000504606 WDR59Q6PJI9 974 aa12.15□□□□□ -0.46
TRIO-206ENST00000504606 TMEM270Q6UE05 265 aa12.15□□□□□ -0.46
TRIO-206ENST00000504606 DSTYKQ6XUX3 929 aa12.15□□□□□ -0.46
TRIO-206ENST00000504606 FMNL3Q8IVF7 1028 aa12.15□□□□□ -0.46
TRIO-206ENST00000504606 FAM71AQ8IYT1 594 aa12.15□□□□□ -0.46
TRIO-206ENST00000504606 CMTR2Q8IYT2 770 aaKnown RBP12.15□□□□□ -0.46
TRIO-206ENST00000504606 UBR7Q8N806 425 aa12.15□□□□□ -0.46
TRIO-206ENST00000504606 CCDC112Q8NEF3 446 aa12.15□□□□□ -0.46
TRIO-206ENST00000504606 HASPINQ8TF76 798 aa12.15□□□□□ -0.46
TRIO-206ENST00000504606 ZNF689Q96CS4 500 aaPredicted RBP12.15□□□□□ -0.46
TRIO-206ENST00000504606 YME1L1Q96TA2 773 aa12.15□□□□□ -0.46
TRIO-206ENST00000504606 TMEM175Q9BSA9 504 aa12.15□□□□□ -0.46
TRIO-206ENST00000504606 MTIF3Q9H2K0 278 aaKnown RBP12.15□□□□□ -0.46
TRIO-206ENST00000504606 KCNF1Q9H3M0 494 aa12.15□□□□□ -0.46
TRIO-206ENST00000504606 CISHQ9NSE2 258 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms