RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 VPS16Q9H269 839 aa14.29□□□□□ -0.12
PDLIM7-212ENST00000504380 TMEM8AQ9HCN3 771 aa14.29□□□□□ -0.12
PDLIM7-212ENST00000504380 POLIQ9UNA4 740 aa14.29□□□□□ -0.12
PDLIM7-212ENST00000504380 TIMM13Q9Y5L4 95 aaPredicted RBP14.29□□□□□ -0.12
PDLIM7-212ENST00000504380 COL4A4P53420 1690 aaPredicted RBP14.29□□□□□ -0.12
PDLIM7-212ENST00000504380 TMEM189-UBE2V1I3L0A0 370 aa14.28□□□□□ -0.12
PDLIM7-212ENST00000504380 C2CD2LO14523 706 aa14.28□□□□□ -0.12
PDLIM7-212ENST00000504380 STX10O60499 249 aa14.28□□□□□ -0.12
PDLIM7-212ENST00000504380 LPXNO60711 386 aa14.28□□□□□ -0.12
PDLIM7-212ENST00000504380 EFEMP2O95967 443 aa14.28□□□□□ -0.12
PDLIM7-212ENST00000504380 AFPP02771 609 aaKnown RBP14.28□□□□□ -0.12
PDLIM7-212ENST00000504380 PRKCSHP14314 528 aaPredicted RBP14.28□□□□□ -0.12
PDLIM7-212ENST00000504380 ZNF18P17022 549 aa14.28□□□□□ -0.12
PDLIM7-212ENST00000504380 CDK11BP21127 795 aaKnown RBP14.28□□□□□ -0.12
PDLIM7-212ENST00000504380 TKTP29401 623 aaKnown RBP14.28□□□□□ -0.12
PDLIM7-212ENST00000504380 GTF2H1P32780 548 aa14.28□□□□□ -0.12
PDLIM7-212ENST00000504380 CA8P35219 290 aa14.28□□□□□ -0.12
PDLIM7-212ENST00000504380 IRS1P35568 1242 aa14.28□□□□□ -0.12
PDLIM7-212ENST00000504380 TAF6P49848 677 aa14.28□□□□□ -0.12
PDLIM7-212ENST00000504380 MXI1P50539 228 aa14.28□□□□□ -0.12
PDLIM7-212ENST00000504380 MYL7Q01449 175 aa14.28□□□□□ -0.12
PDLIM7-212ENST00000504380 ENPEPQ07075 957 aa14.28□□□□□ -0.12
PDLIM7-212ENST00000504380 MYO9BQ13459 2157 aa14.28□□□□□ -0.12
PDLIM7-212ENST00000504380 CAMK1Q14012 370 aa14.28□□□□□ -0.12
PDLIM7-212ENST00000504380 MIIPQ5JXC2 388 aa14.28□□□□□ -0.12
PDLIM7-212ENST00000504380 FAM171A1Q5VUB5 890 aa14.28□□□□□ -0.12
PDLIM7-212ENST00000504380 KRT39Q6A163 491 aa14.28□□□□□ -0.12
PDLIM7-212ENST00000504380 DDX53Q86TM3 631 aaKnown RBP14.28□□□□□ -0.12
PDLIM7-212ENST00000504380 GAS2L3Q86XJ1 694 aa14.28□□□□□ -0.12
PDLIM7-212ENST00000504380 VPS52Q8N1B4 723 aa14.28□□□□□ -0.12
PDLIM7-212ENST00000504380 FAM200AQ8TCP9 573 aa14.28□□□□□ -0.12
PDLIM7-212ENST00000504380 SENP8Q96LD8 212 aa14.28□□□□□ -0.12
PDLIM7-212ENST00000504380 TUBGCP2Q9BSJ2 902 aa14.28□□□□□ -0.12
PDLIM7-212ENST00000504380 R3HCC1Q9Y3T6 440 aaKnown RBP14.28□□□□□ -0.12
PDLIM7-212ENST00000504380 SF3B1O75533 1304 aaKnown RBP eCLIP14.27□□□□□ -0.12
PDLIM7-212ENST00000504380 PES1O00541 588 aaKnown RBP14.27□□□□□ -0.13
PDLIM7-212ENST00000504380 LRMPQ12912 555 aa14.27□□□□□ -0.13
PDLIM7-212ENST00000504380 MAN2A1Q16706 1144 aa14.27□□□□□ -0.13
PDLIM7-212ENST00000504380 VWA3BQ502W6 1294 aa14.27□□□□□ -0.13
PDLIM7-212ENST00000504380 RTP2Q5QGT7 225 aa14.27□□□□□ -0.13
PDLIM7-212ENST00000504380 PLPP4Q5VZY2 271 aa14.27□□□□□ -0.13
PDLIM7-212ENST00000504380 PRSS55Q6UWB4 352 aaPredicted RBP14.27□□□□□ -0.13
PDLIM7-212ENST00000504380 LRRC52Q8N7C0 313 aa14.27□□□□□ -0.13
PDLIM7-212ENST00000504380 SUSD3Q96L08 255 aa14.27□□□□□ -0.13
PDLIM7-212ENST00000504380 ZNF560Q96MR9 790 aa14.27□□□□□ -0.13
PDLIM7-212ENST00000504380 CRACR2AQ9BSW2 395 aa14.27□□□□□ -0.13
PDLIM7-212ENST00000504380 HERC2P3Q9BVR0 1158 aa14.27□□□□□ -0.13
PDLIM7-212ENST00000504380 XYLT2Q9H1B5 865 aa14.27□□□□□ -0.13
PDLIM7-212ENST00000504380 APOBEC3GQ9HC16 384 aaKnown RBP14.27□□□□□ -0.13
PDLIM7-212ENST00000504380 NXF1Q9UBU9 619 aaKnown RBP14.27□□□□□ -0.13
PDLIM7-212ENST00000504380 PUF60Q9UHX1 559 aaKnown RBP14.27□□□□□ -0.13
PDLIM7-212ENST00000504380 VWA8A3KMH1 1905 aa14.27□□□□□ -0.13
PDLIM7-212ENST00000504380 KPNA7A9QM74 516 aa14.26□□□□□ -0.13
PDLIM7-212ENST00000504380 CYB561D2O14569 222 aa14.26□□□□□ -0.13
PDLIM7-212ENST00000504380 CXCL14O95715 111 aa14.26□□□□□ -0.13
PDLIM7-212ENST00000504380 SOD2P04179 222 aa14.26□□□□□ -0.13
PDLIM7-212ENST00000504380 COL9A1P20849 921 aa14.26□□□□□ -0.13
PDLIM7-212ENST00000504380 EEF1GP26641 437 aaKnown RBP14.26□□□□□ -0.13
PDLIM7-212ENST00000504380 AARSP49588 968 aaKnown RBP eCLIP14.26□□□□□ -0.13
PDLIM7-212ENST00000504380 COPB1P53618 953 aaKnown RBP14.26□□□□□ -0.13
PDLIM7-212ENST00000504380 ADGRE1Q14246 886 aa14.26□□□□□ -0.13
PDLIM7-212ENST00000504380 PTPN21Q16825 1174 aa14.26□□□□□ -0.13
PDLIM7-212ENST00000504380 ZNF699Q32M78 642 aa14.26□□□□□ -0.13
PDLIM7-212ENST00000504380 SV2CQ496J9 727 aa14.26□□□□□ -0.13
PDLIM7-212ENST00000504380 SCARA5Q6ZMJ2 495 aa14.26□□□□□ -0.13
PDLIM7-212ENST00000504380 TMC7Q7Z402 723 aa14.26□□□□□ -0.13
PDLIM7-212ENST00000504380 RNF168Q8IYW5 571 aaPredicted RBP14.26□□□□□ -0.13
PDLIM7-212ENST00000504380 MICAL1Q8TDZ2 1067 aa14.26□□□□□ -0.13
PDLIM7-212ENST00000504380 RIN2Q8WYP3 895 aaPredicted RBP14.26□□□□□ -0.13
PDLIM7-212ENST00000504380 TATDN2Q93075 761 aa14.26□□□□□ -0.13
PDLIM7-212ENST00000504380 CDX2Q99626 313 aaPredicted RBP14.26□□□□□ -0.13
PDLIM7-212ENST00000504380 TCF25Q9BQ70 676 aa14.26□□□□□ -0.13
PDLIM7-212ENST00000504380 ZBP1Q9H171 429 aa14.26□□□□□ -0.13
PDLIM7-212ENST00000504380 RBSNQ9H1K0 784 aa14.26□□□□□ -0.13
PDLIM7-212ENST00000504380 NDST4Q9H3R1 872 aa14.26□□□□□ -0.13
PDLIM7-212ENST00000504380 ENTPD7Q9NQZ7 604 aa14.26□□□□□ -0.13
PDLIM7-212ENST00000504380 RAB20Q9NX57 234 aa14.26□□□□□ -0.13
PDLIM7-212ENST00000504380 LIMA1Q9UHB6 759 aaKnown RBP14.26□□□□□ -0.13
PDLIM7-212ENST00000504380 PCDHB8Q9UN66 801 aa14.26□□□□□ -0.13
PDLIM7-212ENST00000504380 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.26□□□□□ -0.13
PDLIM7-212ENST00000504380 SNX9Q9Y5X1 595 aa14.26□□□□□ -0.13
PDLIM7-212ENST00000504380 ATG2AQ2TAZ0 1938 aa14.25□□□□□ -0.13
PDLIM7-212ENST00000504380 TMEM265A0A087WTH1 108 aa14.25□□□□□ -0.13
PDLIM7-212ENST00000504380 GOLGA6L19H0YKK7 550 aa14.25□□□□□ -0.13
PDLIM7-212ENST00000504380 FSCN2O14926 492 aa14.25□□□□□ -0.13
PDLIM7-212ENST00000504380 RPL17P18621 184 aaKnown RBP14.25□□□□□ -0.13
PDLIM7-212ENST00000504380 FGFR3P22607 806 aa14.25□□□□□ -0.13
PDLIM7-212ENST00000504380 IGFBP4P22692 258 aa14.25□□□□□ -0.13
PDLIM7-212ENST00000504380 PNPLA4P41247 253 aa14.25□□□□□ -0.13
PDLIM7-212ENST00000504380 RAP1GAPP47736 663 aa14.25□□□□□ -0.13
PDLIM7-212ENST00000504380 CDR1P51861 262 aa14.25□□□□□ -0.13
PDLIM7-212ENST00000504380 APBA1Q02410 837 aa14.25□□□□□ -0.13
PDLIM7-212ENST00000504380 MYO1EQ12965 1108 aa14.25□□□□□ -0.13
PDLIM7-212ENST00000504380 SGSM1Q2NKQ1 1148 aa14.25□□□□□ -0.13
PDLIM7-212ENST00000504380 WDR72Q3MJ13 1102 aa14.25□□□□□ -0.13
PDLIM7-212ENST00000504380 WSCD1Q658N2 575 aa14.25□□□□□ -0.13
PDLIM7-212ENST00000504380 APTXQ7Z2E3 356 aaKnown RBP14.25□□□□□ -0.13
PDLIM7-212ENST00000504380 GLYCTKQ8IVS8 523 aa14.25□□□□□ -0.13
PDLIM7-212ENST00000504380 FBXL13Q8NEE6 735 aa14.25□□□□□ -0.13
PDLIM7-212ENST00000504380 MYLIPQ8WY64 445 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms