RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 SALL4Q9UJQ4 1053 aa7.41□□□□□ -1.22
TOPBP1-203ENST00000503464 NAGPAQ9UK23 515 aa7.41□□□□□ -1.22
TOPBP1-203ENST00000503464 ITGA11Q9UKX5 1188 aa7.41□□□□□ -1.22
TOPBP1-203ENST00000503464 NOD1Q9Y239 953 aa7.41□□□□□ -1.22
TOPBP1-203ENST00000503464 NME7Q9Y5B8 376 aa7.41□□□□□ -1.22
TOPBP1-203ENST00000503464 PCDHA13Q9Y5I0 950 aa7.41□□□□□ -1.22
TOPBP1-203ENST00000503464 SQORQ9Y6N5 450 aa7.41□□□□□ -1.22
TOPBP1-203ENST00000503464 DUSP10Q9Y6W6 482 aa7.41□□□□□ -1.22
TOPBP1-203ENST00000503464 KIAA0100Q14667 2235 aaKnown RBP7.41□□□□□ -1.22
TOPBP1-203ENST00000503464 FAM170AA1A519 330 aa7.4□□□□□ -1.22
TOPBP1-203ENST00000503464 C9IYK1 514 aa7.4□□□□□ -1.22
TOPBP1-203ENST00000503464 SPTLC1O15269 473 aa7.4□□□□□ -1.22
TOPBP1-203ENST00000503464 PJA2O43164 708 aa7.4□□□□□ -1.22
TOPBP1-203ENST00000503464 AKR1B10O60218 316 aa7.4□□□□□ -1.22
TOPBP1-203ENST00000503464 PQBP1O60828 265 aaKnown RBP7.4□□□□□ -1.22
TOPBP1-203ENST00000503464 ZNF623O75123 536 aa7.4□□□□□ -1.22
TOPBP1-203ENST00000503464 MMEP08473 750 aa7.4□□□□□ -1.22
TOPBP1-203ENST00000503464 CFHP08603 1231 aa7.4□□□□□ -1.22
TOPBP1-203ENST00000503464 KRT19P08727 400 aa7.4□□□□□ -1.22
TOPBP1-203ENST00000503464 WEE2P0C1S8 567 aa7.4□□□□□ -1.22
TOPBP1-203ENST00000503464 CYP11B1P15538 503 aa7.4□□□□□ -1.22
TOPBP1-203ENST00000503464 SELPP16109 830 aa7.4□□□□□ -1.22
TOPBP1-203ENST00000503464 ANXA13P27216 316 aa7.4□□□□□ -1.22
TOPBP1-203ENST00000503464 MLH1P40692 756 aa7.4□□□□□ -1.22
TOPBP1-203ENST00000503464 USP8P40818 1118 aa7.4□□□□□ -1.22
TOPBP1-203ENST00000503464 GJA8P48165 433 aa7.4□□□□□ -1.22
TOPBP1-203ENST00000503464 YARSP54577 528 aaKnown RBP7.4□□□□□ -1.22
TOPBP1-203ENST00000503464 CDH8P55286 799 aa7.4□□□□□ -1.22
TOPBP1-203ENST00000503464 FAAP100Q0VG06 881 aa7.4□□□□□ -1.22
TOPBP1-203ENST00000503464 TRPC3Q13507 836 aa7.4□□□□□ -1.22
TOPBP1-203ENST00000503464 TRIM60Q495X7 471 aa7.4□□□□□ -1.22
TOPBP1-203ENST00000503464 C1orf53Q5VUE5 145 aa7.4□□□□□ -1.22
TOPBP1-203ENST00000503464 C9orf57Q5W0N0 161 aa7.4□□□□□ -1.22
TOPBP1-203ENST00000503464 SCARA5Q6ZMJ2 495 aa7.4□□□□□ -1.22
TOPBP1-203ENST00000503464 LRRC8DQ7L1W4 858 aa7.4□□□□□ -1.22
TOPBP1-203ENST00000503464 GLYCTKQ8IVS8 523 aa7.4□□□□□ -1.22
TOPBP1-203ENST00000503464 CAGE1Q8TC20 777 aa7.4□□□□□ -1.22
TOPBP1-203ENST00000503464 TAF4BQ92750 862 aa7.4□□□□□ -1.22
TOPBP1-203ENST00000503464 JAKMIP2Q96AA8 810 aa7.4□□□□□ -1.22
TOPBP1-203ENST00000503464 TWNKQ96RR1 684 aa7.4□□□□□ -1.22
TOPBP1-203ENST00000503464 WDR24Q96S15 920 aa7.4□□□□□ -1.22
TOPBP1-203ENST00000503464 AGPAT1Q99943 283 aa7.4□□□□□ -1.22
TOPBP1-203ENST00000503464 ADAM2Q99965 735 aa7.4□□□□□ -1.22
TOPBP1-203ENST00000503464 SEZ6LQ9BYH1 1024 aa7.4□□□□□ -1.22
TOPBP1-203ENST00000503464 IFIH1Q9BYX4 1025 aaKnown RBP7.4□□□□□ -1.22
TOPBP1-203ENST00000503464 WNT8AQ9H1J5 351 aa7.4□□□□□ -1.22
TOPBP1-203ENST00000503464 CISHQ9NSE2 258 aa7.4□□□□□ -1.22
TOPBP1-203ENST00000503464 NXF1Q9UBU9 619 aaKnown RBP7.4□□□□□ -1.22
TOPBP1-203ENST00000503464 PARP2Q9UGN5 583 aa7.4□□□□□ -1.22
TOPBP1-203ENST00000503464 HMGXB4Q9UGU5 601 aa7.4□□□□□ -1.22
TOPBP1-203ENST00000503464 AGAP1Q9UPQ3 857 aa7.4□□□□□ -1.22
TOPBP1-203ENST00000503464 BZW2Q9Y6E2 419 aaKnown RBP7.4□□□□□ -1.22
TOPBP1-203ENST00000503464 ATP8B3O60423 1300 aa7.4□□□□□ -1.22
TOPBP1-203ENST00000503464 TTC3P53804 2025 aa7.4□□□□□ -1.23
TOPBP1-203ENST00000503464 VWA8A3KMH1 1905 aa7.39□□□□□ -1.23
TOPBP1-203ENST00000503464 NLRC5Q86WI3 1866 aa7.39□□□□□ -1.23
TOPBP1-203ENST00000503464 A0A0U1RQF3 1178 aa7.39□□□□□ -1.23
TOPBP1-203ENST00000503464 GOLGA6L9A6NEM1 432 aa7.39□□□□□ -1.23
TOPBP1-203ENST00000503464 ARL5CA6NH57 179 aa7.39□□□□□ -1.23
TOPBP1-203ENST00000503464 PIRO00625 290 aa7.39□□□□□ -1.23
TOPBP1-203ENST00000503464 CCP110O43303 1012 aa7.39□□□□□ -1.23
TOPBP1-203ENST00000503464 B4GALT3O60512 393 aa7.39□□□□□ -1.23
TOPBP1-203ENST00000503464 OFD1O75665 1012 aa7.39□□□□□ -1.23
TOPBP1-203ENST00000503464 TFRCP02786 760 aaKnown RBP7.39□□□□□ -1.23
TOPBP1-203ENST00000503464 ITGA4P13612 1032 aa7.39□□□□□ -1.23
TOPBP1-203ENST00000503464 KRT5P13647 590 aa7.39□□□□□ -1.23
TOPBP1-203ENST00000503464 TNNT1P13805 278 aa7.39□□□□□ -1.23
TOPBP1-203ENST00000503464 CD58P19256 250 aa7.39□□□□□ -1.23
TOPBP1-203ENST00000503464 TBXAS1P24557 533 aaPredicted RBP7.39□□□□□ -1.23
TOPBP1-203ENST00000503464 LRPAP1P30533 357 aa7.39□□□□□ -1.23
TOPBP1-203ENST00000503464 ATICP31939 592 aa7.39□□□□□ -1.23
TOPBP1-203ENST00000503464 MAGEA1P43355 309 aa7.39□□□□□ -1.23
TOPBP1-203ENST00000503464 CTCFP49711 727 aaPredicted RBP7.39□□□□□ -1.23
TOPBP1-203ENST00000503464 ETF1P62495 437 aaKnown RBP7.39□□□□□ -1.23
TOPBP1-203ENST00000503464 KRT83P78385 493 aa7.39□□□□□ -1.23
TOPBP1-203ENST00000503464 RBP5P82980 135 aa7.39□□□□□ -1.23
TOPBP1-203ENST00000503464 CDR2Q01850 454 aa7.39□□□□□ -1.23
TOPBP1-203ENST00000503464 INCA1Q0VD86 236 aa7.39□□□□□ -1.23
TOPBP1-203ENST00000503464 ORC1Q13415 861 aa7.39□□□□□ -1.23
TOPBP1-203ENST00000503464 BMS1Q14692 1282 aaKnown RBP7.39□□□□□ -1.23
TOPBP1-203ENST00000503464 PTPN14Q15678 1187 aa7.39□□□□□ -1.23
TOPBP1-203ENST00000503464 WDR72Q3MJ13 1102 aa7.39□□□□□ -1.23
TOPBP1-203ENST00000503464 ZNF667Q5HYK9 610 aa7.39□□□□□ -1.23
TOPBP1-203ENST00000503464 TAF3Q5VWG9 929 aa7.39□□□□□ -1.23
TOPBP1-203ENST00000503464 TMEM270Q6UE05 265 aa7.39□□□□□ -1.23
TOPBP1-203ENST00000503464 LIMS2Q7Z4I7 341 aa7.39□□□□□ -1.23
TOPBP1-203ENST00000503464 ECHDC2Q86YB7 292 aa7.39□□□□□ -1.23
TOPBP1-203ENST00000503464 RPUSD2Q8IZ73 545 aaKnown RBP7.39□□□□□ -1.23
TOPBP1-203ENST00000503464 CRIPAKQ8N1N5 446 aa7.39□□□□□ -1.23
TOPBP1-203ENST00000503464 USP38Q8NB14 1042 aa7.39□□□□□ -1.23
TOPBP1-203ENST00000503464 RBBP8NLQ8NC74 664 aaPredicted RBP7.39□□□□□ -1.23
TOPBP1-203ENST00000503464 TFAP2BQ92481 460 aa7.39□□□□□ -1.23
TOPBP1-203ENST00000503464 HPDLQ96IR7 371 aa7.39□□□□□ -1.23
TOPBP1-203ENST00000503464 FAM81BQ96LP2 452 aa7.39□□□□□ -1.23
TOPBP1-203ENST00000503464 GAD1Q99259 594 aa7.39□□□□□ -1.23
TOPBP1-203ENST00000503464 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.39□□□□□ -1.23
TOPBP1-203ENST00000503464 IMPG2Q9BZV3 1241 aa7.39□□□□□ -1.23
TOPBP1-203ENST00000503464 DEF6Q9H4E7 631 aa7.39□□□□□ -1.23
TOPBP1-203ENST00000503464 RGS18Q9NS28 235 aa7.39□□□□□ -1.23
TOPBP1-203ENST00000503464 TBX21Q9UL17 535 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms