RNA–Protein interactions for RNA: ENST00000503388.1

NDFIP1-202, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 2

Gene NDFIP1, Length 4,164 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-202ENST00000503388 PAEPP09466 180 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 VDRP11473 427 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 GFAPP14136 432 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 GGCXP38435 758 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 ATP1A2P50993 1020 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 ARFIP2P53365 341 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 RNASE9P60153 205 aaKnown RBP5□□□□□ -1.61
NDFIP1-202ENST00000503388 BASP1P80723 227 aaKnown RBP5□□□□□ -1.61
NDFIP1-202ENST00000503388 RAD51Q06609 339 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 MAPK7Q13164 816 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 ITGA9Q13797 1035 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 NCAPHQ15003 741 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 PDCD2Q16342 344 aaPredicted RBP5□□□□□ -1.61
NDFIP1-202ENST00000503388 SNRNP35Q16560 246 aaKnown RBP5□□□□□ -1.61
NDFIP1-202ENST00000503388 AASDHQ4L235 1098 aaPredicted RBP5□□□□□ -1.61
NDFIP1-202ENST00000503388 IZUMO3Q5VZ72 239 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 SRLQ86TD4 932 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 LCA5Q86VQ0 697 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 WDR49Q8IV35 697 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 RNF168Q8IYW5 571 aaPredicted RBP5□□□□□ -1.61
NDFIP1-202ENST00000503388 FEZF2Q8TBJ5 459 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 ATXN2LQ8WWM7 1075 aaKnown RBP5□□□□□ -1.61
NDFIP1-202ENST00000503388 JADE3Q92613 823 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 PGM2Q96G03 612 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 REEP2Q9BRK0 252 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 RTFDC1Q9BY42 306 aaPredicted RBP5□□□□□ -1.61
NDFIP1-202ENST00000503388 TMEM134Q9H6X4 195 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 ERAP1Q9NZ08 941 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 ZNF70Q9UC06 446 aaPredicted RBP5□□□□□ -1.61
NDFIP1-202ENST00000503388 GRID1Q9ULK0 1009 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 NAV1Q8NEY1 1877 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 PTPRFP10586 1907 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 UNCXA6NJT0 531 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 HACD1B0YJ81 288 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 CXCL11O14625 94 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 APOEP02649 317 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 CHGBP05060 677 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 PRKCBP05771 671 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 NR3C2P08235 984 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 SNRPAP09012 282 aaKnown RBP5□□□□□ -1.61
NDFIP1-202ENST00000503388 RALAP11233 206 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 CDH2P19022 906 aaPredicted RBP5□□□□□ -1.61
NDFIP1-202ENST00000503388 GRK2P25098 689 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 SPRP35270 261 aaPredicted RBP5□□□□□ -1.61
NDFIP1-202ENST00000503388 SLC16A2P36021 539 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 FXR1P51114 621 aaKnown RBP eCLIP5□□□□□ -1.61
NDFIP1-202ENST00000503388 ARHGDIAP52565 204 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 OXCT1P55809 520 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 PSMC1P62191 440 aaKnown RBP5□□□□□ -1.61
NDFIP1-202ENST00000503388 ART3Q13508 389 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 MFSD14CQ5VZR4 134 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 CAPRIN2Q6IMN6 1127 aaKnown RBP5□□□□□ -1.61
NDFIP1-202ENST00000503388 MAEAQ7L5Y9 396 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 SPATA21Q7Z572 469 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 SCYL3Q8IZE3 742 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 DNAAF3Q8N9W5 541 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 TPCN2Q8NHX9 752 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 DTX3LQ8TDB6 740 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 MICAL1Q8TDZ2 1067 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 DPF2Q92785 391 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 DDX17Q92841 729 aaKnown RBP5□□□□□ -1.61
NDFIP1-202ENST00000503388 ASB2Q96Q27 587 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 XPO6Q96QU8 1125 aaKnown RBP5□□□□□ -1.61
NDFIP1-202ENST00000503388 PSMB7Q99436 277 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 PARK7Q99497 189 aaKnown RBP5□□□□□ -1.61
NDFIP1-202ENST00000503388 VAT1Q99536 393 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 CGRRF1Q99675 332 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 ZSWIM1Q9BR11 485 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 CALN1Q9BXU9 219 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 TRIM54Q9BYV2 358 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 GANQ9H2C0 597 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 ST6GALNAC4Q9H4F1 302 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 STN1Q9H668 368 aaKnown RBP5□□□□□ -1.61
NDFIP1-202ENST00000503388 CATSPERBQ9H7T0 1116 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 DBNDD1Q9H9R9 158 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 AGPAT3Q9NRZ7 376 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 GABBR1Q9UBS5 961 aa5□□□□□ -1.61
NDFIP1-202ENST00000503388 CCDC88AQ3V6T2 1871 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 MYH7P12883 1935 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 PLSCR1O15162 318 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 GYG2O15488 501 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 LRRN2O75325 713 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 ANXA9O76027 345 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 GDF11O95390 407 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 ATP1A1P05023 1023 aaKnown RBP4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 ABHD2P08910 425 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 EIF2AK2P19525 551 aaKnown RBP4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 LIG3P49916 1009 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 MRPS35P82673 323 aaKnown RBP4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 FMR1Q06787 632 aaKnown RBP eCLIP4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 GRB10Q13322 594 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 BEND6Q5SZJ8 279 aaPredicted RBP4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 RARS2Q5T160 578 aaKnown RBP4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 NAPEPLDQ6IQ20 393 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 C16orf89Q6UX73 402 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 SLC13A5Q86YT5 568 aaPredicted RBP4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 DCP1BQ8IZD4 617 aaKnown RBP4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 ANKRD13CQ8N6S4 541 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 MARCH10Q8NA82 808 aaPredicted RBP4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 MMP19Q99542 508 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms