RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 C17orf53Q8N3J3 647 aaPredicted RBP8.7□□□□□ -1.02
TOPBP1-202ENST00000503338 SLC30A5Q8TAD4 765 aa8.7□□□□□ -1.02
TOPBP1-202ENST00000503338 CXorf38Q8TB03 319 aa8.7□□□□□ -1.02
TOPBP1-202ENST00000503338 EPS8L1Q8TE68 723 aa8.7□□□□□ -1.02
TOPBP1-202ENST00000503338 SEPT8Q92599 483 aa8.7□□□□□ -1.02
TOPBP1-202ENST00000503338 KAT5Q92993 513 aa8.7□□□□□ -1.02
TOPBP1-202ENST00000503338 DDX27Q96GQ7 796 aaKnown RBP8.7□□□□□ -1.02
TOPBP1-202ENST00000503338 C16orf45Q96MC5 204 aaPredicted RBP8.7□□□□□ -1.02
TOPBP1-202ENST00000503338 UROC1Q96N76 676 aa8.7□□□□□ -1.02
TOPBP1-202ENST00000503338 ALS2CR12Q96Q35 445 aa8.7□□□□□ -1.02
TOPBP1-202ENST00000503338 SYT11Q9BT88 431 aa8.7□□□□□ -1.02
TOPBP1-202ENST00000503338 TSPYL2Q9H2G4 693 aaPredicted RBP8.7□□□□□ -1.02
TOPBP1-202ENST00000503338 HIPK3Q9H422 1215 aa8.7□□□□□ -1.02
TOPBP1-202ENST00000503338 C11orf49Q9H6J7 331 aa8.7□□□□□ -1.02
TOPBP1-202ENST00000503338 ELAC1Q9H777 363 aaKnown RBP8.7□□□□□ -1.02
TOPBP1-202ENST00000503338 RSAD1Q9HA92 442 aa8.7□□□□□ -1.02
TOPBP1-202ENST00000503338 RRAGDQ9NQL2 400 aaPredicted RBP8.7□□□□□ -1.02
TOPBP1-202ENST00000503338 CISHQ9NSE2 258 aa8.7□□□□□ -1.02
TOPBP1-202ENST00000503338 KANSL3Q9P2N6 904 aa8.7□□□□□ -1.02
TOPBP1-202ENST00000503338 KIAA1257Q9ULG3 409 aa8.7□□□□□ -1.02
TOPBP1-202ENST00000503338 HES2Q9Y543 173 aa8.7□□□□□ -1.02
TOPBP1-202ENST00000503338 PAXBP1Q9Y5B6 917 aa8.7□□□□□ -1.02
TOPBP1-202ENST00000503338 RALGAPA2Q2PPJ7 1873 aa8.7□□□□□ -1.02
TOPBP1-202ENST00000503338 A0A087X0T9 212 aa8.69□□□□□ -1.02
TOPBP1-202ENST00000503338 A0A0A6YYK5 440 aaPredicted RBP8.69□□□□□ -1.02
TOPBP1-202ENST00000503338 USP27XA6NNY8 438 aa8.69□□□□□ -1.02
TOPBP1-202ENST00000503338 C9IYK1 514 aa8.69□□□□□ -1.02
TOPBP1-202ENST00000503338 DDX3XO00571 662 aaKnown RBP eCLIP8.69□□□□□ -1.02
TOPBP1-202ENST00000503338 PIRO00625 290 aa8.69□□□□□ -1.02
TOPBP1-202ENST00000503338 HOXA2O43364 376 aa8.69□□□□□ -1.02
TOPBP1-202ENST00000503338 PQBP1O60828 265 aaKnown RBP8.69□□□□□ -1.02
TOPBP1-202ENST00000503338 MYCP01106 439 aaPredicted RBP8.69□□□□□ -1.02
TOPBP1-202ENST00000503338 H2AFZP0C0S5 128 aa8.69□□□□□ -1.02
TOPBP1-202ENST00000503338 FAM228BP0C875 321 aa8.69□□□□□ -1.02
TOPBP1-202ENST00000503338 ACO1P21399 889 aaKnown RBP8.69□□□□□ -1.02
TOPBP1-202ENST00000503338 GNA15P30679 374 aa8.69□□□□□ -1.02
TOPBP1-202ENST00000503338 ASPAP45381 313 aa8.69□□□□□ -1.02
TOPBP1-202ENST00000503338 TAF6P49848 677 aa8.69□□□□□ -1.02
TOPBP1-202ENST00000503338 FAM189BP81408 668 aa8.69□□□□□ -1.02
TOPBP1-202ENST00000503338 CYP27A1Q02318 531 aa8.69□□□□□ -1.02
TOPBP1-202ENST00000503338 GRIK3Q13003 919 aa8.69□□□□□ -1.02
TOPBP1-202ENST00000503338 TUBB2AQ13885 445 aa8.69□□□□□ -1.02
TOPBP1-202ENST00000503338 STILQ15468 1287 aa8.69□□□□□ -1.02
TOPBP1-202ENST00000503338 PLEKHG4Q58EX7 1191 aa8.69□□□□□ -1.02
TOPBP1-202ENST00000503338 H2AFVQ71UI9 128 aa8.69□□□□□ -1.02
TOPBP1-202ENST00000503338 NECAB2Q7Z6G3 386 aa8.69□□□□□ -1.02
TOPBP1-202ENST00000503338 GLYCTKQ8IVS8 523 aa8.69□□□□□ -1.02
TOPBP1-202ENST00000503338 RPUSD2Q8IZ73 545 aaKnown RBP8.69□□□□□ -1.02
TOPBP1-202ENST00000503338 UBR7Q8N806 425 aa8.69□□□□□ -1.02
TOPBP1-202ENST00000503338 RBBP8NLQ8NC74 664 aaPredicted RBP8.69□□□□□ -1.02
TOPBP1-202ENST00000503338 TRIM58Q8NG06 486 aa8.69□□□□□ -1.02
TOPBP1-202ENST00000503338 SPATA18Q8TC71 538 aa8.69□□□□□ -1.02
TOPBP1-202ENST00000503338 SECISBP2LQ93073 1101 aaKnown RBP8.69□□□□□ -1.02
TOPBP1-202ENST00000503338 TRIM11Q96F44 468 aa8.69□□□□□ -1.02
TOPBP1-202ENST00000503338 ZMAT2Q96NC0 199 aaKnown RBP8.69□□□□□ -1.02
TOPBP1-202ENST00000503338 PPP1R10Q96QC0 940 aaKnown RBP8.69□□□□□ -1.02
TOPBP1-202ENST00000503338 TUBB2BQ9BVA1 445 aa8.69□□□□□ -1.02
TOPBP1-202ENST00000503338 PDCL3Q9H2J4 239 aa8.69□□□□□ -1.02
TOPBP1-202ENST00000503338 LZTFL1Q9NQ48 299 aa8.69□□□□□ -1.02
TOPBP1-202ENST00000503338 PRDM10Q9NQV6 1147 aa8.69□□□□□ -1.02
TOPBP1-202ENST00000503338 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.69□□□□□ -1.02
TOPBP1-202ENST00000503338 SEPT11Q9NVA2 429 aaKnown RBP8.69□□□□□ -1.02
TOPBP1-202ENST00000503338 GDAP2Q9NXN4 497 aa8.69□□□□□ -1.02
TOPBP1-202ENST00000503338 NXF1Q9UBU9 619 aaKnown RBP8.69□□□□□ -1.02
TOPBP1-202ENST00000503338 NOCTQ9UK39 431 aaKnown RBP8.69□□□□□ -1.02
TOPBP1-202ENST00000503338 BARX2Q9UMQ3 279 aaPredicted RBP8.69□□□□□ -1.02
TOPBP1-202ENST00000503338 NENFQ9UMX5 172 aa8.69□□□□□ -1.02
TOPBP1-202ENST00000503338 REXO2Q9Y3B8 237 aaKnown RBP8.69□□□□□ -1.02
TOPBP1-202ENST00000503338 CEP83Q9Y592 693 aa8.69□□□□□ -1.02
TOPBP1-202ENST00000503338 UMODL1Q5DID0 1318 aa8.69□□□□□ -1.02
TOPBP1-202ENST00000503338 ANK1P16157 1881 aa8.68□□□□□ -1.02
TOPBP1-202ENST00000503338 ANKRD62A6NC57 917 aa8.68□□□□□ -1.02
TOPBP1-202ENST00000503338 ARL5CA6NH57 179 aa8.68□□□□□ -1.02
TOPBP1-202ENST00000503338 KPNA7A9QM74 516 aa8.68□□□□□ -1.02
TOPBP1-202ENST00000503338 PTGESO14684 152 aa8.68□□□□□ -1.02
TOPBP1-202ENST00000503338 ZNF263O14978 683 aa8.68□□□□□ -1.02
TOPBP1-202ENST00000503338 MGEA5O60502 916 aa8.68□□□□□ -1.02
TOPBP1-202ENST00000503338 ABCB7O75027 752 aa8.68□□□□□ -1.02
TOPBP1-202ENST00000503338 RTN2O75298 545 aa8.68□□□□□ -1.02
TOPBP1-202ENST00000503338 TACC1O75410 805 aa8.68□□□□□ -1.02
TOPBP1-202ENST00000503338 LSM8O95777 96 aaKnown RBP8.68□□□□□ -1.02
TOPBP1-202ENST00000503338 CXCL10P02778 98 aa8.68□□□□□ -1.02
TOPBP1-202ENST00000503338 TMEM253P0C7T8 217 aa8.68□□□□□ -1.02
TOPBP1-202ENST00000503338 PNMA6AP0CW24 399 aaPredicted RBP8.68□□□□□ -1.02
TOPBP1-202ENST00000503338 MYBL1P10243 752 aa8.68□□□□□ -1.02
TOPBP1-202ENST00000503338 CASQ1P31415 396 aa8.68□□□□□ -1.02
TOPBP1-202ENST00000503338 MLH1P40692 756 aa8.68□□□□□ -1.02
TOPBP1-202ENST00000503338 ARHGAP25P42331 645 aa8.68□□□□□ -1.02
TOPBP1-202ENST00000503338 MNX1P50219 401 aaPredicted RBP8.68□□□□□ -1.02
TOPBP1-202ENST00000503338 ZNF132P52740 706 aa8.68□□□□□ -1.02
TOPBP1-202ENST00000503338 ATN1P54259 1190 aaPredicted RBP8.68□□□□□ -1.02
TOPBP1-202ENST00000503338 GNG11P61952 73 aa8.68□□□□□ -1.02
TOPBP1-202ENST00000503338 FMO1Q01740 532 aa8.68□□□□□ -1.02
TOPBP1-202ENST00000503338 INCA1Q0VD86 236 aa8.68□□□□□ -1.02
TOPBP1-202ENST00000503338 GLRA4Q5JXX5 417 aa8.68□□□□□ -1.02
TOPBP1-202ENST00000503338 GLB1LQ6UWU2 654 aa8.68□□□□□ -1.02
TOPBP1-202ENST00000503338 AGMOQ6ZNB7 445 aa8.68□□□□□ -1.02
TOPBP1-202ENST00000503338 ZNF598Q86UK7 904 aaKnown RBP8.68□□□□□ -1.02
TOPBP1-202ENST00000503338 SLC47A2Q86VL8 602 aa8.68□□□□□ -1.02
TOPBP1-202ENST00000503338 UNC93AQ86WB7 457 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms