RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 PLEKHA7Q6IQ23 1121 aa10.48□□□□□ -0.73
CLIP1-204ENST00000501271 TRIM72Q6ZMU5 477 aa10.48□□□□□ -0.73
CLIP1-204ENST00000501271 SYDE1Q6ZW31 735 aaPredicted RBP10.48□□□□□ -0.73
CLIP1-204ENST00000501271 PHF13Q86YI8 300 aaPredicted RBP10.48□□□□□ -0.73
CLIP1-204ENST00000501271 RHOT1Q8IXI2 618 aa10.48□□□□□ -0.73
CLIP1-204ENST00000501271 GRK7Q8WTQ7 553 aa10.48□□□□□ -0.73
CLIP1-204ENST00000501271 NIFKQ9BYG3 293 aaKnown RBP10.48□□□□□ -0.73
CLIP1-204ENST00000501271 EFCC1Q9HA90 598 aa10.48□□□□□ -0.73
CLIP1-204ENST00000501271 INTS9Q9NV88 658 aaKnown RBP10.48□□□□□ -0.73
CLIP1-204ENST00000501271 KLHL11Q9NVR0 708 aa10.48□□□□□ -0.73
CLIP1-204ENST00000501271 CTNNAL1Q9UBT7 734 aa10.48□□□□□ -0.73
CLIP1-204ENST00000501271 USTQ9Y2C2 406 aa10.48□□□□□ -0.73
CLIP1-204ENST00000501271 IGKV6D-21A0A0A0MT36 114 aa10.47□□□□□ -0.73
CLIP1-204ENST00000501271 DNM1LO00429 736 aa10.47□□□□□ -0.73
CLIP1-204ENST00000501271 TLR3O15455 904 aaKnown RBP10.47□□□□□ -0.73
CLIP1-204ENST00000501271 LDHAP00338 332 aaKnown RBP10.47□□□□□ -0.73
CLIP1-204ENST00000501271 TCF4P15884 667 aa10.47□□□□□ -0.73
CLIP1-204ENST00000501271 CREB1P16220 341 aa10.47□□□□□ -0.73
CLIP1-204ENST00000501271 HNRNPH1P31943 449 aaKnown RBP10.47□□□□□ -0.73
CLIP1-204ENST00000501271 NF2P35240 595 aa10.47□□□□□ -0.73
CLIP1-204ENST00000501271 TNFSF9P41273 254 aa10.47□□□□□ -0.73
CLIP1-204ENST00000501271 NCOA4Q13772 614 aa10.47□□□□□ -0.73
CLIP1-204ENST00000501271 CNGA2Q16280 664 aa10.47□□□□□ -0.73
CLIP1-204ENST00000501271 ANKRD20A8PQ5CZ79 823 aa10.47□□□□□ -0.73
CLIP1-204ENST00000501271 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.47□□□□□ -0.73
CLIP1-204ENST00000501271 PRUNE1Q86TP1 453 aa10.47□□□□□ -0.73
CLIP1-204ENST00000501271 KATNAL2Q8IYT4 538 aa10.47□□□□□ -0.73
CLIP1-204ENST00000501271 LRRC34Q8IZ02 419 aa10.47□□□□□ -0.73
CLIP1-204ENST00000501271 ATL2Q8NHH9 583 aa10.47□□□□□ -0.73
CLIP1-204ENST00000501271 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.47□□□□□ -0.73
CLIP1-204ENST00000501271 TRPM4Q8TD43 1214 aa10.47□□□□□ -0.73
CLIP1-204ENST00000501271 VCPIP1Q96JH7 1222 aa10.47□□□□□ -0.73
CLIP1-204ENST00000501271 OSBPL8Q9BZF1 889 aa10.47□□□□□ -0.73
CLIP1-204ENST00000501271 ROPN1BQ9BZX4 212 aaPredicted RBP10.47□□□□□ -0.73
CLIP1-204ENST00000501271 STMN4Q9H169 189 aaPredicted RBP10.47□□□□□ -0.73
CLIP1-204ENST00000501271 ROPN1Q9HAT0 212 aaPredicted RBP10.47□□□□□ -0.73
CLIP1-204ENST00000501271 MRPL47Q9HD33 250 aaKnown RBP10.47□□□□□ -0.73
CLIP1-204ENST00000501271 KCNG1Q9UIX4 513 aa10.47□□□□□ -0.73
CLIP1-204ENST00000501271 AFG3L2Q9Y4W6 797 aa10.47□□□□□ -0.73
CLIP1-204ENST00000501271 GOLGA6L7A0A1B0GV03 622 aa10.47□□□□□ -0.73
CLIP1-204ENST00000501271 GSTTP1A0A1W2PQM5 241 aa10.47□□□□□ -0.73
CLIP1-204ENST00000501271 FOXO6A8MYZ6 492 aa10.47□□□□□ -0.73
CLIP1-204ENST00000501271 FZD9O00144 591 aa10.47□□□□□ -0.73
CLIP1-204ENST00000501271 FARP2O94887 1054 aaPredicted RBP10.47□□□□□ -0.73
CLIP1-204ENST00000501271 TTC4O95801 387 aa10.47□□□□□ -0.73
CLIP1-204ENST00000501271 TBXAS1P24557 533 aaPredicted RBP10.47□□□□□ -0.73
CLIP1-204ENST00000501271 ADCY8P40145 1251 aa10.47□□□□□ -0.73
CLIP1-204ENST00000501271 SSR1P43307 286 aaKnown RBP10.47□□□□□ -0.73
CLIP1-204ENST00000501271 IFNAR2P48551 515 aa10.47□□□□□ -0.73
CLIP1-204ENST00000501271 ZNF132P52740 706 aa10.47□□□□□ -0.73
CLIP1-204ENST00000501271 RPL7AP62424 266 aaKnown RBP10.47□□□□□ -0.73
CLIP1-204ENST00000501271 SF3A3Q12874 501 aaKnown RBP eCLIP10.47□□□□□ -0.73
CLIP1-204ENST00000501271 TARBP2Q15633 366 aaKnown RBP10.47□□□□□ -0.73
CLIP1-204ENST00000501271 KYNUQ16719 465 aa10.47□□□□□ -0.73
CLIP1-204ENST00000501271 IFNLR1Q8IU57 520 aaPredicted RBP10.47□□□□□ -0.73
CLIP1-204ENST00000501271 ANKRD35Q8N283 1001 aa10.47□□□□□ -0.73
CLIP1-204ENST00000501271 UBR7Q8N806 425 aa10.47□□□□□ -0.73
CLIP1-204ENST00000501271 DNERQ8NFT8 737 aa10.47□□□□□ -0.73
CLIP1-204ENST00000501271 IPO4Q8TEX9 1081 aaKnown RBP10.47□□□□□ -0.73
CLIP1-204ENST00000501271 SCLT1Q96NL6 688 aa10.47□□□□□ -0.73
CLIP1-204ENST00000501271 TRAIPQ9BWF2 469 aa10.47□□□□□ -0.73
CLIP1-204ENST00000501271 CCDC134Q9H6E4 229 aa10.47□□□□□ -0.73
CLIP1-204ENST00000501271 ANAPC5Q9UJX4 755 aa10.47□□□□□ -0.73
CLIP1-204ENST00000501271 SCINQ9Y6U3 715 aa10.47□□□□□ -0.73
CLIP1-204ENST00000501271 ANK1P16157 1881 aa10.46□□□□□ -0.73
CLIP1-204ENST00000501271 FAM189A1O60320 539 aa10.46□□□□□ -0.73
CLIP1-204ENST00000501271 CST3P01034 146 aaPredicted RBP10.46□□□□□ -0.73
CLIP1-204ENST00000501271 ALDH5A1P51649 535 aaPredicted RBP10.46□□□□□ -0.73
CLIP1-204ENST00000501271 C1QBPQ07021 282 aaKnown RBP10.46□□□□□ -0.73
CLIP1-204ENST00000501271 ZNF252P-AS1Q0IIN9 211 aa10.46□□□□□ -0.73
CLIP1-204ENST00000501271 PRKG1Q13976 671 aa10.46□□□□□ -0.73
CLIP1-204ENST00000501271 PLCB4Q15147 1175 aa10.46□□□□□ -0.73
CLIP1-204ENST00000501271 CCNG2Q16589 344 aa10.46□□□□□ -0.73
CLIP1-204ENST00000501271 ATP13A4Q4VNC1 1196 aa10.46□□□□□ -0.73
CLIP1-204ENST00000501271 TAOK1Q7L7X3 1001 aa10.46□□□□□ -0.73
CLIP1-204ENST00000501271 APOBEC3FQ8IUX4 373 aaKnown RBP10.46□□□□□ -0.73
CLIP1-204ENST00000501271 ZNF606Q8WXB4 792 aa10.46□□□□□ -0.73
CLIP1-204ENST00000501271 BBXQ8WY36 941 aaPredicted RBP10.46□□□□□ -0.73
CLIP1-204ENST00000501271 CCT6BQ92526 530 aa10.46□□□□□ -0.73
CLIP1-204ENST00000501271 SERPINB12Q96P63 405 aa10.46□□□□□ -0.73
CLIP1-204ENST00000501271 TMEM134Q9H6X4 195 aa10.46□□□□□ -0.73
CLIP1-204ENST00000501271 HOXC10Q9NYD6 342 aa10.46□□□□□ -0.73
CLIP1-204ENST00000501271 NINJ2Q9NZG7 142 aa10.46□□□□□ -0.73
CLIP1-204ENST00000501271 PPP1R1BQ9UD71 204 aaPredicted RBP10.46□□□□□ -0.73
CLIP1-204ENST00000501271 PI4K2BG5E9Z4 385 aa10.46□□□□□ -0.74
CLIP1-204ENST00000501271 ADCY3O60266 1144 aa10.46□□□□□ -0.74
CLIP1-204ENST00000501271 POTEJP0CG39 1038 aa10.46□□□□□ -0.74
CLIP1-204ENST00000501271 MMP8P22894 467 aa10.46□□□□□ -0.74
CLIP1-204ENST00000501271 RFC5P40937 340 aa10.46□□□□□ -0.74
CLIP1-204ENST00000501271 LRRC14Q15048 493 aa10.46□□□□□ -0.74
CLIP1-204ENST00000501271 TREML2Q5T2D2 321 aa10.46□□□□□ -0.74
CLIP1-204ENST00000501271 VSTM1Q6UX27 236 aa10.46□□□□□ -0.74
CLIP1-204ENST00000501271 ZBTB33Q86T24 672 aa10.46□□□□□ -0.74
CLIP1-204ENST00000501271 BRSK2Q8IWQ3 736 aa10.46□□□□□ -0.74
CLIP1-204ENST00000501271 CCDC197Q8NCU1 140 aa10.46□□□□□ -0.74
CLIP1-204ENST00000501271 EXD1Q8NHP7 514 aa10.46□□□□□ -0.74
CLIP1-204ENST00000501271 FEZF2Q8TBJ5 459 aa10.46□□□□□ -0.74
CLIP1-204ENST00000501271 ARHGEF2Q92974 986 aaKnown RBP10.46□□□□□ -0.74
CLIP1-204ENST00000501271 MTMR12Q9C0I1 747 aa10.46□□□□□ -0.74
CLIP1-204ENST00000501271 ACTR5Q9H9F9 607 aaPredicted RBP10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms