RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 HSPBP1Q9NZL4 362 aa17.45■□□□□ 0.38
LMNA-217ENST00000498722 TRAF3IP3Q9Y228 551 aa17.45■□□□□ 0.38
LMNA-217ENST00000498722 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.45■□□□□ 0.381e-10■□□□□ 8.8
LMNA-217ENST00000498722 PDXKO00764 312 aa17.44■□□□□ 0.38
LMNA-217ENST00000498722 LINC01565O15544 149 aa17.44■□□□□ 0.38
LMNA-217ENST00000498722 TGFB1I1O43294 461 aa17.44■□□□□ 0.38
LMNA-217ENST00000498722 TPM1P09493 284 aa17.44■□□□□ 0.38
LMNA-217ENST00000498722 RPL9P32969 192 aaKnown RBP17.44■□□□□ 0.38
LMNA-217ENST00000498722 GUCY2FP51841 1108 aa17.44■□□□□ 0.38
LMNA-217ENST00000498722 ELAVL2Q12926 359 aaKnown RBP17.44■□□□□ 0.38
LMNA-217ENST00000498722 TRIM14Q14142 442 aa17.44■□□□□ 0.38
LMNA-217ENST00000498722 PTPN14Q15678 1187 aa17.44■□□□□ 0.38
LMNA-217ENST00000498722 DUSP6Q16828 381 aa17.44■□□□□ 0.38
LMNA-217ENST00000498722 TMEM130Q8N3G9 435 aa17.44■□□□□ 0.38
LMNA-217ENST00000498722 RDH13Q8NBN7 331 aa17.44■□□□□ 0.38
LMNA-217ENST00000498722 BEST2Q8NFU1 509 aa17.44■□□□□ 0.38
LMNA-217ENST00000498722 RIN2Q8WYP3 895 aaPredicted RBP17.44■□□□□ 0.38
LMNA-217ENST00000498722 PABPC5Q96DU9 382 aaKnown RBP17.44■□□□□ 0.38
LMNA-217ENST00000498722 TSPAN18Q96SJ8 248 aa17.44■□□□□ 0.38
LMNA-217ENST00000498722 CDCA3Q99618 268 aaPredicted RBP17.44■□□□□ 0.38
LMNA-217ENST00000498722 TUBGCP2Q9BSJ2 902 aa17.44■□□□□ 0.38
LMNA-217ENST00000498722 EMILIN2Q9BXX0 1053 aa17.44■□□□□ 0.38
LMNA-217ENST00000498722 KCNF1Q9H3M0 494 aa17.44■□□□□ 0.38
LMNA-217ENST00000498722 ASB7Q9H672 318 aa17.44■□□□□ 0.38
LMNA-217ENST00000498722 SSX2IPQ9Y2D8 614 aa17.44■□□□□ 0.38
LMNA-217ENST00000498722 UNC80Q8N2C7 3258 aa17.43■□□□□ 0.38
LMNA-217ENST00000498722 LGALS16A8MUM7 142 aa17.43■□□□□ 0.38
LMNA-217ENST00000498722 I3L4J1 428 aa17.43■□□□□ 0.38
LMNA-217ENST00000498722 TRAPPC3O43617 180 aa17.43■□□□□ 0.38
LMNA-217ENST00000498722 SRGAP2BP0DMP2 458 aa17.43■□□□□ 0.38
LMNA-217ENST00000498722 PRKCSHP14314 528 aaPredicted RBP17.43■□□□□ 0.38
LMNA-217ENST00000498722 RPL13P26373 211 aaKnown RBP17.43■□□□□ 0.38
LMNA-217ENST00000498722 PBX1P40424 430 aa17.43■□□□□ 0.38
LMNA-217ENST00000498722 SNRPFP62306 86 aaKnown RBP17.43■□□□□ 0.38
LMNA-217ENST00000498722 TBX2Q13207 712 aaPredicted RBP17.43■□□□□ 0.38
LMNA-217ENST00000498722 AAK1Q2M2I8 961 aa17.43■□□□□ 0.38
LMNA-217ENST00000498722 BRSK2Q8IWQ3 736 aa17.43■□□□□ 0.38
LMNA-217ENST00000498722 ZC3H3Q8IXZ2 948 aaKnown RBP17.43■□□□□ 0.38
LMNA-217ENST00000498722 EFHBQ8N7U6 833 aa17.43■□□□□ 0.38
LMNA-217ENST00000498722 C3orf58Q8NDZ4 430 aa17.43■□□□□ 0.38
LMNA-217ENST00000498722 CCDC112Q8NEF3 446 aa17.43■□□□□ 0.38
LMNA-217ENST00000498722 GOLGA5Q8TBA6 731 aa17.43■□□□□ 0.38
LMNA-217ENST00000498722 CACTINQ8WUQ7 758 aaKnown RBP17.43■□□□□ 0.38
LMNA-217ENST00000498722 CGNQ9P2M7 1197 aaKnown RBP17.43■□□□□ 0.38
LMNA-217ENST00000498722 DERAQ9Y315 318 aa17.43■□□□□ 0.38
LMNA-217ENST00000498722 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.43■□□□□ 0.38
LMNA-217ENST00000498722 A0A1W2PQC6 194 aa17.42■□□□□ 0.38
LMNA-217ENST00000498722 ZNF233A6NK53 670 aa17.42■□□□□ 0.38
LMNA-217ENST00000498722 SPDYE4A6NLX3 237 aa17.42■□□□□ 0.38
LMNA-217ENST00000498722 H3BQ06 376 aaPredicted RBP17.42■□□□□ 0.38
LMNA-217ENST00000498722 TMEM189-UBE2V1I3L0A0 370 aa17.42■□□□□ 0.38
LMNA-217ENST00000498722 DLL1O00548 723 aa17.42■□□□□ 0.38
LMNA-217ENST00000498722 CETN3O15182 167 aa17.42■□□□□ 0.38
LMNA-217ENST00000498722 TEX33O43247 280 aa17.42■□□□□ 0.38
LMNA-217ENST00000498722 ZNF500O60304 480 aaPredicted RBP17.42■□□□□ 0.38
LMNA-217ENST00000498722 ADRB2P07550 413 aa17.42■□□□□ 0.38
LMNA-217ENST00000498722 IGFBP6P24592 240 aaPredicted RBP17.42■□□□□ 0.38
LMNA-217ENST00000498722 KLRC2P26717 231 aa17.42■□□□□ 0.38
LMNA-217ENST00000498722 BRCC3P46736 316 aa17.42■□□□□ 0.38
LMNA-217ENST00000498722 MRPS5P82675 430 aaKnown RBP17.42■□□□□ 0.38
LMNA-217ENST00000498722 RBM10P98175 930 aaKnown RBP17.42■□□□□ 0.38
LMNA-217ENST00000498722 TFAMQ00059 246 aaKnown RBP17.42■□□□□ 0.38
LMNA-217ENST00000498722 POU5F1Q01860 360 aaKnown RBP17.42■□□□□ 0.38
LMNA-217ENST00000498722 UBXN1Q04323 297 aa17.42■□□□□ 0.38
LMNA-217ENST00000498722 CLUL1Q15846 466 aa17.42■□□□□ 0.38
LMNA-217ENST00000498722 NFIL3Q16649 462 aa17.42■□□□□ 0.38
LMNA-217ENST00000498722 MAN2A1Q16706 1144 aa17.42■□□□□ 0.38
LMNA-217ENST00000498722 PPFIBP1Q86W92 1011 aa17.42■□□□□ 0.38
LMNA-217ENST00000498722 CBWD2Q8IUF1 395 aa17.42■□□□□ 0.38
LMNA-217ENST00000498722 GLYCTKQ8IVS8 523 aa17.42■□□□□ 0.38
LMNA-217ENST00000498722 RNF168Q8IYW5 571 aaPredicted RBP17.42■□□□□ 0.38
LMNA-217ENST00000498722 XXYLT1Q8NBI6 393 aa17.42■□□□□ 0.38
LMNA-217ENST00000498722 TTPALQ9BTX7 342 aa17.42■□□□□ 0.38
LMNA-217ENST00000498722 KIAA1586Q9HCI6 787 aa17.42■□□□□ 0.38
LMNA-217ENST00000498722 PDE11AQ9HCR9 933 aa17.42■□□□□ 0.38
LMNA-217ENST00000498722 BARX2Q9UMQ3 279 aaPredicted RBP17.42■□□□□ 0.38
LMNA-217ENST00000498722 C2CD2Q9Y426 696 aa17.42■□□□□ 0.38
LMNA-217ENST00000498722 IRAK3Q9Y616 596 aa17.42■□□□□ 0.38
LMNA-217ENST00000498722 TSC2P49815 1807 aa17.41■□□□□ 0.38
LMNA-217ENST00000498722 EXOC3O60645 756 aa17.41■□□□□ 0.38
LMNA-217ENST00000498722 CLASP2O75122 1294 aaKnown RBP17.41■□□□□ 0.38
LMNA-217ENST00000498722 CNPP09543 421 aaKnown RBP17.41■□□□□ 0.38
LMNA-217ENST00000498722 CYP3A5P20815 502 aa17.41■□□□□ 0.38
LMNA-217ENST00000498722 MARSP56192 900 aaKnown RBP17.41■□□□□ 0.38
LMNA-217ENST00000498722 DSG1Q02413 1049 aa17.41■□□□□ 0.38
LMNA-217ENST00000498722 ADAM15Q13444 863 aa17.41■□□□□ 0.38
LMNA-217ENST00000498722 ZBTB6Q15916 424 aa17.41■□□□□ 0.38
LMNA-217ENST00000498722 SNRNP35Q16560 246 aaKnown RBP17.41■□□□□ 0.38
LMNA-217ENST00000498722 CCDC40Q4G0X9 1142 aa17.41■□□□□ 0.38
LMNA-217ENST00000498722 FKBP15Q5T1M5 1219 aa17.41■□□□□ 0.38
LMNA-217ENST00000498722 KIAA0319Q5VV43 1072 aa17.41■□□□□ 0.38
LMNA-217ENST00000498722 PRSS55Q6UWB4 352 aaPredicted RBP17.41■□□□□ 0.38
LMNA-217ENST00000498722 DPP3Q9NY33 737 aa17.41■□□□□ 0.38
LMNA-217ENST00000498722 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.4■□□□□ 0.38
LMNA-217ENST00000498722 PES1O00541 588 aaKnown RBP17.4■□□□□ 0.38
LMNA-217ENST00000498722 TBX10O75333 385 aa17.4■□□□□ 0.38
LMNA-217ENST00000498722 EFEMP2O95967 443 aa17.4■□□□□ 0.38
LMNA-217ENST00000498722 ADH1AP07327 375 aa17.4■□□□□ 0.38
LMNA-217ENST00000498722 RPL17P18621 184 aaKnown RBP17.4■□□□□ 0.38
LMNA-217ENST00000498722 TKTP29401 623 aaKnown RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms