RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 PDCD11Q14690 1871 aaKnown RBP13.83□□□□□ -0.2
HSPG2-213ENST00000498495 ARHGEF37A1IGU5 675 aa13.83□□□□□ -0.2
HSPG2-213ENST00000498495 PDXKO00764 312 aa13.83□□□□□ -0.2
HSPG2-213ENST00000498495 EXOC3O60645 756 aa13.83□□□□□ -0.2
HSPG2-213ENST00000498495 RFPL2O75678 378 aa13.83□□□□□ -0.2
HSPG2-213ENST00000498495 ZMYND10O75800 440 aa13.83□□□□□ -0.2
HSPG2-213ENST00000498495 TMEM191BP0C7N4 346 aa13.83□□□□□ -0.2
HSPG2-213ENST00000498495 ELF1P32519 619 aa13.83□□□□□ -0.2
HSPG2-213ENST00000498495 AARSP49588 968 aaKnown RBP eCLIP13.83□□□□□ -0.2
HSPG2-213ENST00000498495 TAF6P49848 677 aa13.83□□□□□ -0.2
HSPG2-213ENST00000498495 SNRNP35Q16560 246 aaKnown RBP13.83□□□□□ -0.2
HSPG2-213ENST00000498495 UVSSAQ2YD98 709 aa13.83□□□□□ -0.2
HSPG2-213ENST00000498495 PPM1LQ5SGD2 360 aa13.83□□□□□ -0.2
HSPG2-213ENST00000498495 SLC8B1Q6J4K2 584 aa13.83□□□□□ -0.2
HSPG2-213ENST00000498495 C12orf56Q8IXR9 622 aa13.83□□□□□ -0.2
HSPG2-213ENST00000498495 CSGALNACT2Q8N6G5 542 aa13.83□□□□□ -0.2
HSPG2-213ENST00000498495 ZNF461Q8TAF7 563 aa13.83□□□□□ -0.2
HSPG2-213ENST00000498495 ANKRD36BP1Q96IX9 119 aa13.83□□□□□ -0.2
HSPG2-213ENST00000498495 FNBP1Q96RU3 617 aa13.83□□□□□ -0.2
HSPG2-213ENST00000498495 OXCT2Q9BYC2 517 aaPredicted RBP13.83□□□□□ -0.2
HSPG2-213ENST00000498495 POMKQ9H5K3 350 aa13.83□□□□□ -0.2
HSPG2-213ENST00000498495 ZDHHC7Q9NXF8 308 aa13.83□□□□□ -0.2
HSPG2-213ENST00000498495 FBXL5Q9UKA1 691 aa13.83□□□□□ -0.2
HSPG2-213ENST00000498495 FBXW11Q9UKB1 542 aa13.83□□□□□ -0.2
HSPG2-213ENST00000498495 AGAP1Q9UPQ3 857 aa13.83□□□□□ -0.2
HSPG2-213ENST00000498495 NR2E1Q9Y466 385 aa13.83□□□□□ -0.2
HSPG2-213ENST00000498495 KPNA7A9QM74 516 aa13.82□□□□□ -0.2
HSPG2-213ENST00000498495 LOC730098B7Z3J9 87 aa13.82□□□□□ -0.2
HSPG2-213ENST00000498495 CYB561D2O14569 222 aa13.82□□□□□ -0.2
HSPG2-213ENST00000498495 SPTLC1O15269 473 aa13.82□□□□□ -0.2
HSPG2-213ENST00000498495 CALUO43852 315 aaPredicted RBP13.82□□□□□ -0.2
HSPG2-213ENST00000498495 TBC1D4O60343 1298 aa13.82□□□□□ -0.2
HSPG2-213ENST00000498495 OAZ2O95190 189 aa13.82□□□□□ -0.2
HSPG2-213ENST00000498495 SMC2O95347 1197 aa13.82□□□□□ -0.2
HSPG2-213ENST00000498495 TNNC2P02585 160 aa13.82□□□□□ -0.2
HSPG2-213ENST00000498495 ITGB3P05106 788 aa13.82□□□□□ -0.2
HSPG2-213ENST00000498495 C8AP07357 584 aa13.82□□□□□ -0.2
HSPG2-213ENST00000498495 KRT19P08727 400 aa13.82□□□□□ -0.2
HSPG2-213ENST00000498495 ODC1P11926 461 aa13.82□□□□□ -0.2
HSPG2-213ENST00000498495 TNNI1P19237 187 aa13.82□□□□□ -0.2
HSPG2-213ENST00000498495 TYMPP19971 482 aa13.82□□□□□ -0.2
HSPG2-213ENST00000498495 POLR2BP30876 1174 aaKnown RBP13.82□□□□□ -0.2
HSPG2-213ENST00000498495 PNPLA4P41247 253 aa13.82□□□□□ -0.2
HSPG2-213ENST00000498495 RBP5P82980 135 aa13.82□□□□□ -0.2
HSPG2-213ENST00000498495 ROR1Q01973 937 aa13.82□□□□□ -0.2
HSPG2-213ENST00000498495 PNOCQ13519 176 aa13.82□□□□□ -0.2
HSPG2-213ENST00000498495 DUOXA2Q1HG44 320 aa13.82□□□□□ -0.2
HSPG2-213ENST00000498495 SV2CQ496J9 727 aa13.82□□□□□ -0.2
HSPG2-213ENST00000498495 CCDC149Q6ZUS6 474 aa13.82□□□□□ -0.2
HSPG2-213ENST00000498495 METTL23Q86XA0 190 aa13.82□□□□□ -0.2
HSPG2-213ENST00000498495 SMG7Q92540 1137 aaKnown RBP13.82□□□□□ -0.2
HSPG2-213ENST00000498495 CCDC127Q96BQ5 260 aa13.82□□□□□ -0.2
HSPG2-213ENST00000498495 ZNF560Q96MR9 790 aa13.82□□□□□ -0.2
HSPG2-213ENST00000498495 PRKD2Q9BZL6 878 aa13.82□□□□□ -0.2
HSPG2-213ENST00000498495 TSHZ2Q9NRE2 1034 aa13.82□□□□□ -0.2
HSPG2-213ENST00000498495 INTS13Q9NVM9 706 aa13.82□□□□□ -0.2
HSPG2-213ENST00000498495 RMND1Q9NWS8 449 aa13.82□□□□□ -0.2
HSPG2-213ENST00000498495 MAPK8IP1Q9UQF2 711 aa13.82□□□□□ -0.2
HSPG2-213ENST00000498495 GADD45BO75293 160 aaPredicted RBP13.81□□□□□ -0.2
HSPG2-213ENST00000498495 PRPF40AO75400 957 aaKnown RBP13.81□□□□□ -0.2
HSPG2-213ENST00000498495 ABLIM3O94929 683 aa13.81□□□□□ -0.2
HSPG2-213ENST00000498495 DLATP10515 647 aaKnown RBP13.81□□□□□ -0.2
HSPG2-213ENST00000498495 SP100P23497 879 aaPredicted RBP13.81□□□□□ -0.2
HSPG2-213ENST00000498495 TPGS2Q68CL5 300 aa13.81□□□□□ -0.2
HSPG2-213ENST00000498495 LMBRD2Q68DH5 695 aaPredicted RBP13.81□□□□□ -0.2
HSPG2-213ENST00000498495 OVOS1Q6IE37 1185 aa13.81□□□□□ -0.2
HSPG2-213ENST00000498495 RTL10Q7L3V2 364 aa13.81□□□□□ -0.2
HSPG2-213ENST00000498495 WDR49Q8IV35 697 aa13.81□□□□□ -0.2
HSPG2-213ENST00000498495 THEM5Q8N1Q8 247 aa13.81□□□□□ -0.2
HSPG2-213ENST00000498495 C1orf127Q8N9H9 656 aa13.81□□□□□ -0.2
HSPG2-213ENST00000498495 FEZF2Q8TBJ5 459 aa13.81□□□□□ -0.2
HSPG2-213ENST00000498495 BORCS6Q96GS4 357 aa13.81□□□□□ -0.2
HSPG2-213ENST00000498495 GSDMAQ96QA5 445 aa13.81□□□□□ -0.2
HSPG2-213ENST00000498495 RHOBTB2Q9BYZ6 727 aa13.81□□□□□ -0.2
HSPG2-213ENST00000498495 MTMR12Q9C0I1 747 aa13.81□□□□□ -0.2
HSPG2-213ENST00000498495 KCTD10Q9H3F6 313 aa13.81□□□□□ -0.2
HSPG2-213ENST00000498495 ITGA11Q9UKX5 1188 aa13.81□□□□□ -0.2
HSPG2-213ENST00000498495 DSEQ9UL01 958 aa13.81□□□□□ -0.2
HSPG2-213ENST00000498495 VWA8A3KMH1 1905 aa13.81□□□□□ -0.2
HSPG2-213ENST00000498495 PLXNA3P51805 1871 aa13.8□□□□□ -0.2
HSPG2-213ENST00000498495 WDR27A2RRH5 827 aa13.8□□□□□ -0.2
HSPG2-213ENST00000498495 OR6C75A6NL08 312 aa13.8□□□□□ -0.2
HSPG2-213ENST00000498495 PRRG1O14668 218 aa13.8□□□□□ -0.2
HSPG2-213ENST00000498495 KINO60870 393 aaKnown RBP13.8□□□□□ -0.2
HSPG2-213ENST00000498495 HNRNPA1P09651 372 aaKnown RBP eCLIP13.8□□□□□ -0.2
HSPG2-213ENST00000498495 ALADP13716 330 aa13.8□□□□□ -0.2
HSPG2-213ENST00000498495 CPB1P15086 417 aa13.8□□□□□ -0.2
HSPG2-213ENST00000498495 ATF2P15336 505 aa13.8□□□□□ -0.2
HSPG2-213ENST00000498495 CYP24A1Q07973 514 aa13.8□□□□□ -0.2
HSPG2-213ENST00000498495 MYBPC2Q14324 1141 aa13.8□□□□□ -0.2
HSPG2-213ENST00000498495 PSMD6Q15008 389 aa13.8□□□□□ -0.2
HSPG2-213ENST00000498495 RNF135Q8IUD6 432 aa13.8□□□□□ -0.2
HSPG2-213ENST00000498495 SLC9A9Q8IVB4 645 aa13.8□□□□□ -0.2
HSPG2-213ENST00000498495 ELOA2Q8IYF1 753 aaPredicted RBP13.8□□□□□ -0.2
HSPG2-213ENST00000498495 PLCD3Q8N3E9 789 aa13.8□□□□□ -0.2
HSPG2-213ENST00000498495 GUF1Q8N442 669 aaKnown RBP13.8□□□□□ -0.2
HSPG2-213ENST00000498495 OR5B17Q8NGF7 314 aa13.8□□□□□ -0.2
HSPG2-213ENST00000498495 SLC7A14Q8TBB6 771 aa13.8□□□□□ -0.2
HSPG2-213ENST00000498495 SMARCE1Q969G3 411 aa13.8□□□□□ -0.2
HSPG2-213ENST00000498495 ZNF707Q96C28 371 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms