RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 ZIM2Q9NZV7 527 aa6.1□□□□□ -1.43
SSR3-209ENST00000498205 CFAP97Q9P2B7 532 aa6.1□□□□□ -1.43
SSR3-209ENST00000498205 FEZ2Q9UHY8 353 aaPredicted RBP6.1□□□□□ -1.43
SSR3-209ENST00000498205 TTBK1Q5TCY1 1321 aaPredicted RBP6.09□□□□□ -1.43
SSR3-209ENST00000498205 CDHR4A6H8M9 788 aa6.09□□□□□ -1.43
SSR3-209ENST00000498205 CCER2I3L3R5 266 aa6.09□□□□□ -1.43
SSR3-209ENST00000498205 CDKL5O76039 1030 aa6.09□□□□□ -1.43
SSR3-209ENST00000498205 FTLP02792 175 aaPredicted RBP6.09□□□□□ -1.43
SSR3-209ENST00000498205 NR4A1P22736 598 aa6.09□□□□□ -1.43
SSR3-209ENST00000498205 DDX6P26196 483 aaKnown RBP eCLIP6.09□□□□□ -1.43
SSR3-209ENST00000498205 ZNF280AP59817 542 aaPredicted RBP6.09□□□□□ -1.43
SSR3-209ENST00000498205 PIGFQ07326 219 aa6.09□□□□□ -1.43
SSR3-209ENST00000498205 NOGQ13253 232 aa6.09□□□□□ -1.43
SSR3-209ENST00000498205 IFIT1BQ5T764 474 aaKnown RBP6.09□□□□□ -1.43
SSR3-209ENST00000498205 TMEM132CQ8N3T6 1108 aa6.09□□□□□ -1.43
SSR3-209ENST00000498205 SLC16A11Q8NCK7 471 aa6.09□□□□□ -1.43
SSR3-209ENST00000498205 CPEB3Q8NE35 698 aaKnown RBP6.09□□□□□ -1.43
SSR3-209ENST00000498205 TBC1D15Q8TC07 691 aa6.09□□□□□ -1.43
SSR3-209ENST00000498205 HPS3Q969F9 1004 aa6.09□□□□□ -1.43
SSR3-209ENST00000498205 MTFMTQ96DP5 389 aaKnown RBP6.09□□□□□ -1.43
SSR3-209ENST00000498205 NEU1Q99519 415 aa6.09□□□□□ -1.43
SSR3-209ENST00000498205 GTPBP4Q9BZE4 634 aaKnown RBP6.09□□□□□ -1.43
SSR3-209ENST00000498205 ZNF768Q9H5H4 540 aaKnown RBP6.09□□□□□ -1.43
SSR3-209ENST00000498205 METTL14Q9HCE5 456 aaKnown RBP6.09□□□□□ -1.43
SSR3-209ENST00000498205 DKK2Q9UBU2 259 aa6.09□□□□□ -1.43
SSR3-209ENST00000498205 ZDHHC8Q9ULC8 765 aa6.09□□□□□ -1.43
SSR3-209ENST00000498205 GCC2Q8IWJ2 1684 aa6.09□□□□□ -1.43
SSR3-209ENST00000498205 HECW1Q76N89 1606 aa6.09□□□□□ -1.43
SSR3-209ENST00000498205 RAD54L2Q9Y4B4 1467 aa6.09□□□□□ -1.44
SSR3-209ENST00000498205 FHOD3Q2V2M9 1422 aa6.08□□□□□ -1.44
SSR3-209ENST00000498205 PTPN23Q9H3S7 1636 aa6.08□□□□□ -1.44
SSR3-209ENST00000498205 MYADML2A6NDP7 307 aa6.08□□□□□ -1.44
SSR3-209ENST00000498205 NDUFA10O95299 355 aa6.08□□□□□ -1.44
SSR3-209ENST00000498205 CHEK2O96017 543 aa6.08□□□□□ -1.44
SSR3-209ENST00000498205 FOSP01100 380 aaPredicted RBP6.08□□□□□ -1.44
SSR3-209ENST00000498205 AVPR1BP47901 424 aa6.08□□□□□ -1.44
SSR3-209ENST00000498205 SNAPC2Q13487 334 aa6.08□□□□□ -1.44
SSR3-209ENST00000498205 ABHD17BQ5VST6 288 aa6.08□□□□□ -1.44
SSR3-209ENST00000498205 COLGALT2Q8IYK4 626 aa6.08□□□□□ -1.44
SSR3-209ENST00000498205 DDX17Q92841 729 aaKnown RBP6.08□□□□□ -1.44
SSR3-209ENST00000498205 FUBP1Q96AE4 644 aaKnown RBP6.08□□□□□ -1.44
SSR3-209ENST00000498205 CDK5RAP3Q96JB5 506 aa6.08□□□□□ -1.44
SSR3-209ENST00000498205 VRK1Q99986 396 aaPredicted RBP6.08□□□□□ -1.44
SSR3-209ENST00000498205 PCED1AQ9H1Q7 454 aa6.08□□□□□ -1.44
SSR3-209ENST00000498205 NCOA2Q15596 1464 aa6.08□□□□□ -1.44
SSR3-209ENST00000498205 ROCK1Q13464 1354 aa6.07□□□□□ -1.44
SSR3-209ENST00000498205 F2RL2O00254 374 aa6.07□□□□□ -1.44
SSR3-209ENST00000498205 RHOBTB3O94955 611 aa6.07□□□□□ -1.44
SSR3-209ENST00000498205 PIK3CGP48736 1102 aa6.07□□□□□ -1.44
SSR3-209ENST00000498205 TGFB2P61812 414 aa6.07□□□□□ -1.44
SSR3-209ENST00000498205 FAM189BP81408 668 aa6.07□□□□□ -1.44
SSR3-209ENST00000498205 OCA2Q04671 838 aa6.07□□□□□ -1.44
SSR3-209ENST00000498205 ZNF844Q08AG5 666 aa6.07□□□□□ -1.44
SSR3-209ENST00000498205 NFE2Q16621 373 aaPredicted RBP6.07□□□□□ -1.44
SSR3-209ENST00000498205 FLYWCH1Q4VC44 716 aa6.07□□□□□ -1.44
SSR3-209ENST00000498205 CCDC93Q567U6 631 aa6.07□□□□□ -1.44
SSR3-209ENST00000498205 CCDC157Q569K6 752 aa6.07□□□□□ -1.44
SSR3-209ENST00000498205 UTP14CQ5TAP6 766 aaKnown RBP6.07□□□□□ -1.44
SSR3-209ENST00000498205 CATIPQ7Z7H3 387 aa6.07□□□□□ -1.44
SSR3-209ENST00000498205 NEU4Q8WWR8 484 aaPredicted RBP6.07□□□□□ -1.44
SSR3-209ENST00000498205 RAB24Q969Q5 203 aa6.07□□□□□ -1.44
SSR3-209ENST00000498205 SORCS2Q96PQ0 1159 aa6.07□□□□□ -1.44
SSR3-209ENST00000498205 BRD9Q9H8M2 597 aa6.07□□□□□ -1.44
SSR3-209ENST00000498205 GALNT9Q9HCQ5 603 aa6.07□□□□□ -1.44
SSR3-209ENST00000498205 LMBRD1Q9NUN5 540 aa6.07□□□□□ -1.44
SSR3-209ENST00000498205 MTO1Q9Y2Z2 717 aaKnown RBP6.07□□□□□ -1.44
SSR3-209ENST00000498205 NAIPQ13075 1403 aa6.07□□□□□ -1.44
SSR3-209ENST00000498205 MTUS2Q5JR59 1369 aa6.06□□□□□ -1.44
SSR3-209ENST00000498205 ADAMTS12P58397 1594 aa6.06□□□□□ -1.44
SSR3-209ENST00000498205 IQGAP2Q13576 1575 aa6.06□□□□□ -1.44
SSR3-209ENST00000498205 NT5C1B-RDH14C9J2C7 533 aa6.06□□□□□ -1.44
SSR3-209ENST00000498205 B3GALT2O43825 422 aa6.06□□□□□ -1.44
SSR3-209ENST00000498205 ERN1O75460 977 aaKnown RBP6.06□□□□□ -1.44
SSR3-209ENST00000498205 AGFG2O95081 481 aa6.06□□□□□ -1.44
SSR3-209ENST00000498205 FGFR4P22455 802 aa6.06□□□□□ -1.44
SSR3-209ENST00000498205 SLC6A2P23975 617 aa6.06□□□□□ -1.44
SSR3-209ENST00000498205 PRDX5P30044 214 aa6.06□□□□□ -1.44
SSR3-209ENST00000498205 INHBCP55103 352 aa6.06□□□□□ -1.44
SSR3-209ENST00000498205 CXADRP78310 365 aa6.06□□□□□ -1.44
SSR3-209ENST00000498205 DPTQ07507 201 aa6.06□□□□□ -1.44
SSR3-209ENST00000498205 RESTQ13127 1097 aa6.06□□□□□ -1.44
SSR3-209ENST00000498205 FHL2Q14192 279 aa6.06□□□□□ -1.44
SSR3-209ENST00000498205 PPP2R5AQ15172 486 aa6.06□□□□□ -1.44
SSR3-209ENST00000498205 MINDY4Q4G0A6 757 aa6.06□□□□□ -1.44
SSR3-209ENST00000498205 NXNQ6DKJ4 435 aa6.06□□□□□ -1.44
SSR3-209ENST00000498205 HEATR3Q7Z4Q2 680 aa6.06□□□□□ -1.44
SSR3-209ENST00000498205 CHPFQ8IZ52 775 aa6.06□□□□□ -1.44
SSR3-209ENST00000498205 BRIX1Q8TDN6 353 aaKnown RBP6.06□□□□□ -1.44
SSR3-209ENST00000498205 JDP2Q8WYK2 163 aa6.06□□□□□ -1.44
SSR3-209ENST00000498205 SCAMP4Q969E2 229 aa6.06□□□□□ -1.44
SSR3-209ENST00000498205 COQ10AQ96MF6 247 aa6.06□□□□□ -1.44
SSR3-209ENST00000498205 RTFDC1Q9BY42 306 aaPredicted RBP6.06□□□□□ -1.44
SSR3-209ENST00000498205 ALOXE3Q9BYJ1 711 aa6.06□□□□□ -1.44
SSR3-209ENST00000498205 SLC12A5Q9H2X9 1139 aa6.06□□□□□ -1.44
SSR3-209ENST00000498205 CYP4F11Q9HBI6 524 aa6.06□□□□□ -1.44
SSR3-209ENST00000498205 ABCF2Q9UG63 623 aa6.06□□□□□ -1.44
SSR3-209ENST00000498205 WDR33Q9C0J8 1336 aaKnown RBP6.05□□□□□ -1.44
SSR3-209ENST00000498205 CENPVL1A0A0U1RR11 272 aa6.05□□□□□ -1.44
SSR3-209ENST00000498205 E7ENX8 843 aa6.05□□□□□ -1.44
SSR3-209ENST00000498205 H3BML4 177 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms