RNA–Protein interactions for RNA: ENST00000497677.5

CTDSP1-214, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 998 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-214ENST00000497677 RNF135Q8IUD6 432 aa17.29■□□□□ 0.36
CTDSP1-214ENST00000497677 PCDHB8Q9UN66 801 aa17.29■□□□□ 0.36
CTDSP1-214ENST00000497677 CDY1Q9Y6F8 540 aa17.29■□□□□ 0.36
CTDSP1-214ENST00000497677 TRIP11Q15643 1979 aa17.29■□□□□ 0.36
CTDSP1-214ENST00000497677 KIAA0391O15091 583 aaKnown RBP17.28■□□□□ 0.36
CTDSP1-214ENST00000497677 ZMYND10O75800 440 aa17.28■□□□□ 0.36
CTDSP1-214ENST00000497677 MYL1P05976 194 aa17.28■□□□□ 0.36
CTDSP1-214ENST00000497677 KMT5BQ4FZB7 885 aa17.28■□□□□ 0.36
CTDSP1-214ENST00000497677 CYP26C1Q6V0L0 522 aa17.28■□□□□ 0.36
CTDSP1-214ENST00000497677 KRBA2Q6ZNG9 492 aa17.28■□□□□ 0.36
CTDSP1-214ENST00000497677 NT5DC4Q86YG4 428 aa17.28■□□□□ 0.36
CTDSP1-214ENST00000497677 GPD1LQ8N335 351 aa17.28■□□□□ 0.36
CTDSP1-214ENST00000497677 KIAA0895Q8NCT3 520 aa17.28■□□□□ 0.36
CTDSP1-214ENST00000497677 CXorf38Q8TB03 319 aa17.28■□□□□ 0.36
CTDSP1-214ENST00000497677 AGPAT3Q9NRZ7 376 aa17.28■□□□□ 0.36
CTDSP1-214ENST00000497677 ZDHHC7Q9NXF8 308 aa17.28■□□□□ 0.36
CTDSP1-214ENST00000497677 DPP3Q9NY33 737 aa17.28■□□□□ 0.36
CTDSP1-214ENST00000497677 FBXL5Q9UKA1 691 aa17.28■□□□□ 0.36
CTDSP1-214ENST00000497677 UBE4BO95155 1302 aa17.27■□□□□ 0.36
CTDSP1-214ENST00000497677 ABLIM3O94929 683 aa17.27■□□□□ 0.36
CTDSP1-214ENST00000497677 OAZ2O95190 189 aa17.27■□□□□ 0.36
CTDSP1-214ENST00000497677 PRR29P0C7W0 189 aa17.27■□□□□ 0.36
CTDSP1-214ENST00000497677 SNRPFP62306 86 aaKnown RBP17.27■□□□□ 0.36
CTDSP1-214ENST00000497677 CAMK4Q16566 473 aa17.27■□□□□ 0.36
CTDSP1-214ENST00000497677 SCARA3Q6AZY7 606 aa17.27■□□□□ 0.36
CTDSP1-214ENST00000497677 CBWD2Q8IUF1 395 aa17.27■□□□□ 0.36
CTDSP1-214ENST00000497677 NELFCDQ8IXH7 590 aa17.27■□□□□ 0.36
CTDSP1-214ENST00000497677 APPL2Q8NEU8 664 aa17.27■□□□□ 0.36
CTDSP1-214ENST00000497677 BORCS6Q96GS4 357 aa17.27■□□□□ 0.36
CTDSP1-214ENST00000497677 PRKD2Q9BZL6 878 aa17.27■□□□□ 0.36
CTDSP1-214ENST00000497677 PDE11AQ9HCR9 933 aa17.27■□□□□ 0.36
CTDSP1-214ENST00000497677 RBAKQ9NYW8 714 aaPredicted RBP17.27■□□□□ 0.36
CTDSP1-214ENST00000497677 HSPBP1Q9NZL4 362 aa17.27■□□□□ 0.36
CTDSP1-214ENST00000497677 TIMM13Q9Y5L4 95 aaPredicted RBP17.27■□□□□ 0.36
CTDSP1-214ENST00000497677 SPDYE4A6NLX3 237 aa17.26■□□□□ 0.35
CTDSP1-214ENST00000497677 C2CD4DB7Z1M9 353 aa17.26■□□□□ 0.35
CTDSP1-214ENST00000497677 H7C4K7 107 aa17.26■□□□□ 0.35
CTDSP1-214ENST00000497677 PAX3P23760 479 aa17.26■□□□□ 0.35
CTDSP1-214ENST00000497677 ROR1Q01973 937 aa17.26■□□□□ 0.35
CTDSP1-214ENST00000497677 DPYDQ12882 1025 aa17.26■□□□□ 0.35
CTDSP1-214ENST00000497677 PSMD2Q13200 908 aa17.26■□□□□ 0.35
CTDSP1-214ENST00000497677 KNOP1Q1ED39 458 aaKnown RBP17.26■□□□□ 0.35
CTDSP1-214ENST00000497677 ELMSAN1Q6PJG2 1045 aa17.26■□□□□ 0.35
CTDSP1-214ENST00000497677 ZNF461Q8TAF7 563 aa17.26■□□□□ 0.35
CTDSP1-214ENST00000497677 FAM84AQ96KN4 292 aa17.26■□□□□ 0.35
CTDSP1-214ENST00000497677 SENP8Q96LD8 212 aa17.26■□□□□ 0.35
CTDSP1-214ENST00000497677 FUCA2Q9BTY2 467 aa17.26■□□□□ 0.35
CTDSP1-214ENST00000497677 GRPEL1Q9HAV7 217 aa17.26■□□□□ 0.35
CTDSP1-214ENST00000497677 WDR6Q9NNW5 1121 aaKnown RBP17.26■□□□□ 0.35
CTDSP1-214ENST00000497677 C11orf16Q9NQ32 467 aa17.26■□□□□ 0.35
CTDSP1-214ENST00000497677 USTQ9Y2C2 406 aa17.26■□□□□ 0.35
CTDSP1-214ENST00000497677 CITO14578 2027 aa17.26■□□□□ 0.35
CTDSP1-214ENST00000497677 WDR27A2RRH5 827 aa17.25■□□□□ 0.35
CTDSP1-214ENST00000497677 ZNF233A6NK53 670 aa17.25■□□□□ 0.35
CTDSP1-214ENST00000497677 CLIC2O15247 247 aa17.25■□□□□ 0.35
CTDSP1-214ENST00000497677 DCXO43602 365 aa17.25■□□□□ 0.35
CTDSP1-214ENST00000497677 RPN1P04843 607 aaKnown RBP17.25■□□□□ 0.35
CTDSP1-214ENST00000497677 TYMPP19971 482 aa17.25■□□□□ 0.35
CTDSP1-214ENST00000497677 SP100P23497 879 aaPredicted RBP17.25■□□□□ 0.35
CTDSP1-214ENST00000497677 TFAMQ00059 246 aaKnown RBP17.25■□□□□ 0.35
CTDSP1-214ENST00000497677 UVSSAQ2YD98 709 aa17.25■□□□□ 0.35
CTDSP1-214ENST00000497677 CTXN3Q4LDR2 81 aa17.25■□□□□ 0.35
CTDSP1-214ENST00000497677 GAS2L3Q86XJ1 694 aa17.25■□□□□ 0.35
CTDSP1-214ENST00000497677 C12orf56Q8IXR9 622 aa17.25■□□□□ 0.35
CTDSP1-214ENST00000497677 C1orf127Q8N9H9 656 aa17.25■□□□□ 0.35
CTDSP1-214ENST00000497677 SMG7Q92540 1137 aaKnown RBP17.25■□□□□ 0.35
CTDSP1-214ENST00000497677 KIAA1586Q9HCI6 787 aa17.25■□□□□ 0.35
CTDSP1-214ENST00000497677 EXOC1Q9NV70 894 aa17.25■□□□□ 0.35
CTDSP1-214ENST00000497677 KIAA1468Q9P260 1216 aa17.25■□□□□ 0.35
CTDSP1-214ENST00000497677 MUTYHQ9UIF7 546 aa17.25■□□□□ 0.35
CTDSP1-214ENST00000497677 NR2E1Q9Y466 385 aa17.25■□□□□ 0.35
CTDSP1-214ENST00000497677 VWA8A3KMH1 1905 aa17.25■□□□□ 0.35
CTDSP1-214ENST00000497677 N4BP1O75113 896 aaKnown RBP17.24■□□□□ 0.35
CTDSP1-214ENST00000497677 RHOBTB3O94955 611 aa17.24■□□□□ 0.35
CTDSP1-214ENST00000497677 C8AP07357 584 aa17.24■□□□□ 0.35
CTDSP1-214ENST00000497677 HNRNPA1P09651 372 aaKnown RBP eCLIP17.24■□□□□ 0.35
CTDSP1-214ENST00000497677 ATF2P15336 505 aa17.24■□□□□ 0.35
CTDSP1-214ENST00000497677 HOXA9P31269 272 aa17.24■□□□□ 0.35
CTDSP1-214ENST00000497677 YWHAHQ04917 246 aaPredicted RBP17.24■□□□□ 0.35
CTDSP1-214ENST00000497677 TYRO3Q06418 890 aa17.24■□□□□ 0.35
CTDSP1-214ENST00000497677 STX1AQ16623 288 aa17.24■□□□□ 0.35
CTDSP1-214ENST00000497677 ZNF280DQ6N043 979 aa17.24■□□□□ 0.35
CTDSP1-214ENST00000497677 DSTYKQ6XUX3 929 aa17.24■□□□□ 0.35
CTDSP1-214ENST00000497677 RTL10Q7L3V2 364 aa17.24■□□□□ 0.35
CTDSP1-214ENST00000497677 KCTD10Q9H3F6 313 aa17.24■□□□□ 0.35
CTDSP1-214ENST00000497677 ANO10Q9NW15 660 aa17.24■□□□□ 0.35
CTDSP1-214ENST00000497677 CGNQ9P2M7 1197 aaKnown RBP17.24■□□□□ 0.35
CTDSP1-214ENST00000497677 PTPRJQ12913 1337 aa17.23■□□□□ 0.35
CTDSP1-214ENST00000497677 SEC24AO95486 1093 aa17.23■□□□□ 0.35
CTDSP1-214ENST00000497677 CYP11A1P05108 521 aa17.23■□□□□ 0.35
CTDSP1-214ENST00000497677 POU2F2P09086 479 aa17.23■□□□□ 0.35
CTDSP1-214ENST00000497677 ALADP13716 330 aa17.23■□□□□ 0.35
CTDSP1-214ENST00000497677 DEKP35659 375 aaKnown RBP17.23■□□□□ 0.35
CTDSP1-214ENST00000497677 ARPP19P56211 112 aa17.23■□□□□ 0.35
CTDSP1-214ENST00000497677 PPM1LQ5SGD2 360 aa17.23■□□□□ 0.35
CTDSP1-214ENST00000497677 LIN9Q5TKA1 542 aa17.23■□□□□ 0.35
CTDSP1-214ENST00000497677 TPGS2Q68CL5 300 aa17.23■□□□□ 0.35
CTDSP1-214ENST00000497677 CCDC149Q6ZUS6 474 aa17.23■□□□□ 0.35
CTDSP1-214ENST00000497677 HS2ST1Q7LGA3 356 aa17.23■□□□□ 0.35
CTDSP1-214ENST00000497677 ZDHHC14Q8IZN3 488 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms