RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 TMX3Q96JJ7 454 aa4.69□□□□□ -1.66
CBX3-208ENST00000497498 KLHL32Q96NJ5 620 aa4.69□□□□□ -1.66
CBX3-208ENST00000497498 KMT5AQ9NQR1 393 aa4.69□□□□□ -1.66
CBX3-208ENST00000497498 JKAMPQ9P055 326 aa4.69□□□□□ -1.66
CBX3-208ENST00000497498 USP35Q9P2H5 1018 aa4.69□□□□□ -1.66
CBX3-208ENST00000497498 IPPQ9Y573 584 aa4.69□□□□□ -1.66
CBX3-208ENST00000497498 PCDHA13Q9Y5I0 950 aa4.69□□□□□ -1.66
CBX3-208ENST00000497498 SETD1BQ9UPS6 1966 aaKnown RBP4.69□□□□□ -1.66
CBX3-208ENST00000497498 CGB1A6NKQ9 187 aa4.68□□□□□ -1.66
CBX3-208ENST00000497498 SUN1O94901 812 aa4.68□□□□□ -1.66
CBX3-208ENST00000497498 GRIA3P42263 894 aa4.68□□□□□ -1.66
CBX3-208ENST00000497498 ANXA11P50995 505 aaKnown RBP4.68□□□□□ -1.66
CBX3-208ENST00000497498 FPGSQ05932 587 aa4.68□□□□□ -1.66
CBX3-208ENST00000497498 ZNF844Q08AG5 666 aa4.68□□□□□ -1.66
CBX3-208ENST00000497498 FLYWCH1Q4VC44 716 aa4.68□□□□□ -1.66
CBX3-208ENST00000497498 ZNF788Q6ZQV5 615 aa4.68□□□□□ -1.66
CBX3-208ENST00000497498 PEG10Q86TG7 708 aaKnown RBP4.68□□□□□ -1.66
CBX3-208ENST00000497498 LPIN2Q92539 896 aa4.68□□□□□ -1.66
CBX3-208ENST00000497498 RAB24Q969Q5 203 aa4.68□□□□□ -1.66
CBX3-208ENST00000497498 HDAC10Q969S8 669 aa4.68□□□□□ -1.66
CBX3-208ENST00000497498 SARAFQ96BY9 339 aa4.68□□□□□ -1.66
CBX3-208ENST00000497498 FBXL20Q96IG2 436 aa4.68□□□□□ -1.66
CBX3-208ENST00000497498 MRGPRX4Q96LA9 322 aa4.68□□□□□ -1.66
CBX3-208ENST00000497498 SLC5A4Q9NY91 659 aa4.68□□□□□ -1.66
CBX3-208ENST00000497498 CDYLQ9Y232 598 aa4.68□□□□□ -1.66
CBX3-208ENST00000497498 KAT6AQ92794 2004 aa4.67□□□□□ -1.66
CBX3-208ENST00000497498 WIPF3A6NGB9 483 aa4.67□□□□□ -1.66
CBX3-208ENST00000497498 ORC4O43929 436 aa4.67□□□□□ -1.66
CBX3-208ENST00000497498 ELFN1P0C7U0 828 aa4.67□□□□□ -1.66
CBX3-208ENST00000497498 C5AR1P21730 350 aa4.67□□□□□ -1.66
CBX3-208ENST00000497498 EDNRBP24530 442 aa4.67□□□□□ -1.66
CBX3-208ENST00000497498 SLC16A1P53985 500 aa4.67□□□□□ -1.66
CBX3-208ENST00000497498 SOX10P56693 466 aa4.67□□□□□ -1.66
CBX3-208ENST00000497498 ZNF280AP59817 542 aaPredicted RBP4.67□□□□□ -1.66
CBX3-208ENST00000497498 POU6F2P78424 691 aaPredicted RBP4.67□□□□□ -1.66
CBX3-208ENST00000497498 RAB39AQ14964 217 aa4.67□□□□□ -1.66
CBX3-208ENST00000497498 CLUL1Q15846 466 aa4.67□□□□□ -1.66
CBX3-208ENST00000497498 CD300EQ496F6 205 aaPredicted RBP4.67□□□□□ -1.66
CBX3-208ENST00000497498 AKNAD1Q5T1N1 836 aa4.67□□□□□ -1.66
CBX3-208ENST00000497498 PGM2L1Q6PCE3 622 aa4.67□□□□□ -1.66
CBX3-208ENST00000497498 ZNF365Q70YC5 407 aa4.67□□□□□ -1.66
CBX3-208ENST00000497498 NECAB2Q7Z6G3 386 aa4.67□□□□□ -1.66
CBX3-208ENST00000497498 ADGRG5Q8IZF4 528 aa4.67□□□□□ -1.66
CBX3-208ENST00000497498 CFAP52Q8N1V2 620 aa4.67□□□□□ -1.66
CBX3-208ENST00000497498 C1orf162Q8NEQ5 155 aaPredicted RBP4.67□□□□□ -1.66
CBX3-208ENST00000497498 TFAP2BQ92481 460 aa4.67□□□□□ -1.66
CBX3-208ENST00000497498 LRIG1Q96JA1 1093 aa4.67□□□□□ -1.66
CBX3-208ENST00000497498 PGBD1Q96JS3 809 aa4.67□□□□□ -1.66
CBX3-208ENST00000497498 DMRTA2Q96SC8 542 aa4.67□□□□□ -1.66
CBX3-208ENST00000497498 CALCOCO1Q9P1Z2 691 aa4.67□□□□□ -1.66
CBX3-208ENST00000497498 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.67□□□□□ -1.66
CBX3-208ENST00000497498 MCM8Q9UJA3 840 aa4.67□□□□□ -1.66
CBX3-208ENST00000497498 LIMCH1Q9UPQ0 1083 aa4.67□□□□□ -1.66
CBX3-208ENST00000497498 CCDC195A0A1B0GUA6 201 aa4.66□□□□□ -1.66
CBX3-208ENST00000497498 WDR27A2RRH5 827 aa4.66□□□□□ -1.66
CBX3-208ENST00000497498 ADM5C9JUS6 153 aa4.66□□□□□ -1.66
CBX3-208ENST00000497498 E7ENX8 843 aa4.66□□□□□ -1.66
CBX3-208ENST00000497498 HTRA2O43464 458 aaPredicted RBP4.66□□□□□ -1.66
CBX3-208ENST00000497498 GPD1P21695 349 aa4.66□□□□□ -1.66
CBX3-208ENST00000497498 IARSP41252 1262 aaKnown RBP4.66□□□□□ -1.66
CBX3-208ENST00000497498 TAP2Q03519 686 aa4.66□□□□□ -1.66
CBX3-208ENST00000497498 TLE1Q04724 770 aa4.66□□□□□ -1.66
CBX3-208ENST00000497498 HLXQ14774 488 aaPredicted RBP4.66□□□□□ -1.66
CBX3-208ENST00000497498 EGFLAMQ63HQ2 1017 aa4.66□□□□□ -1.66
CBX3-208ENST00000497498 TSHZ1Q6ZSZ6 1077 aa4.66□□□□□ -1.66
CBX3-208ENST00000497498 MICALCLQ6ZW33 695 aa4.66□□□□□ -1.66
CBX3-208ENST00000497498 DDX42Q86XP3 938 aaKnown RBP eCLIP4.66□□□□□ -1.66
CBX3-208ENST00000497498 TMIEQ8NEW7 156 aa4.66□□□□□ -1.66
CBX3-208ENST00000497498 NAF1Q96HR8 494 aaKnown RBP4.66□□□□□ -1.66
CBX3-208ENST00000497498 PACSIN1Q9BY11 444 aa4.66□□□□□ -1.66
CBX3-208ENST00000497498 CPNE5Q9HCH3 593 aa4.66□□□□□ -1.66
CBX3-208ENST00000497498 MKS1Q9NXB0 559 aa4.66□□□□□ -1.66
CBX3-208ENST00000497498 SLC45A2Q9UMX9 530 aa4.66□□□□□ -1.66
CBX3-208ENST00000497498 DNAJC9-AS1A6NH13 148 aa4.65□□□□□ -1.67
CBX3-208ENST00000497498 PCDHGA12O60330 932 aa4.65□□□□□ -1.67
CBX3-208ENST00000497498 ANXA1P04083 346 aa4.65□□□□□ -1.67
CBX3-208ENST00000497498 CD1AP06126 327 aa4.65□□□□□ -1.67
CBX3-208ENST00000497498 ITPKBP27987 946 aa4.65□□□□□ -1.67
CBX3-208ENST00000497498 MC2RQ01718 297 aa4.65□□□□□ -1.67
CBX3-208ENST00000497498 PIGFQ07326 219 aa4.65□□□□□ -1.67
CBX3-208ENST00000497498 IL10RAQ13651 578 aa4.65□□□□□ -1.67
CBX3-208ENST00000497498 TXNRD1Q16881 649 aa4.65□□□□□ -1.67
CBX3-208ENST00000497498 C3orf36Q3SXR2 165 aa4.65□□□□□ -1.67
CBX3-208ENST00000497498 PTF1AQ7RTS3 328 aa4.65□□□□□ -1.67
CBX3-208ENST00000497498 PDPRQ8NCN5 879 aa4.65□□□□□ -1.67
CBX3-208ENST00000497498 NSUN7Q8NE18 718 aaKnown RBP4.65□□□□□ -1.67
CBX3-208ENST00000497498 TOR1AIP2Q8NFQ8 470 aa4.65□□□□□ -1.67
CBX3-208ENST00000497498 MYCBPAPQ8TBZ2 947 aa4.65□□□□□ -1.67
CBX3-208ENST00000497498 SNX19Q92543 992 aa4.65□□□□□ -1.67
CBX3-208ENST00000497498 FAXDC2Q96IV6 333 aa4.65□□□□□ -1.67
CBX3-208ENST00000497498 IMPG2Q9BZV3 1241 aa4.65□□□□□ -1.67
CBX3-208ENST00000497498 WDR26Q9H7D7 661 aa4.65□□□□□ -1.67
CBX3-208ENST00000497498 PCDHB1Q9Y5F3 818 aa4.65□□□□□ -1.67
CBX3-208ENST00000497498 PCDHGA9Q9Y5G4 932 aaKnown RBP4.65□□□□□ -1.67
CBX3-208ENST00000497498 PCDHGA8Q9Y5G5 932 aa4.65□□□□□ -1.67
CBX3-208ENST00000497498 PCDHGA7Q9Y5G6 932 aa4.65□□□□□ -1.67
CBX3-208ENST00000497498 PCDHGA6Q9Y5G7 932 aa4.65□□□□□ -1.67
CBX3-208ENST00000497498 PCDHGA3Q9Y5H0 932 aa4.65□□□□□ -1.67
CBX3-208ENST00000497498 KLHL33A6NCF5 533 aa4.64□□□□□ -1.67
CBX3-208ENST00000497498 ABCG1P45844 678 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms