RNA–Protein interactions for RNA: ENST00000496852.5

ATPAF2-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 1,662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-208ENST00000496852 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15□□□□□ -0.019e-15■■■■■ 186.3
ATPAF2-208ENST00000496852 FAM207AQ9NSI2 230 aaPredicted RBP15□□□□□ -0.01
ATPAF2-208ENST00000496852 APEX2Q9UBZ4 518 aa15□□□□□ -0.01
ATPAF2-208ENST00000496852 ATG2AQ2TAZ0 1938 aa14.99□□□□□ -0.01
ATPAF2-208ENST00000496852 GRXCR1A8MXD5 290 aa14.99□□□□□ -0.01
ATPAF2-208ENST00000496852 KPNA7A9QM74 516 aa14.99□□□□□ -0.01
ATPAF2-208ENST00000496852 B3GAT3O94766 335 aa14.99□□□□□ -0.01
ATPAF2-208ENST00000496852 ALDH2P05091 517 aa14.99□□□□□ -0.01
ATPAF2-208ENST00000496852 ITGB1P05556 798 aa14.99□□□□□ -0.01
ATPAF2-208ENST00000496852 CDC25BP30305 580 aa14.99□□□□□ -0.01
ATPAF2-208ENST00000496852 AARSP49588 968 aaKnown RBP eCLIP14.99□□□□□ -0.01
ATPAF2-208ENST00000496852 WDR72Q3MJ13 1102 aa14.99□□□□□ -0.01
ATPAF2-208ENST00000496852 SV2CQ496J9 727 aa14.99□□□□□ -0.01
ATPAF2-208ENST00000496852 ZNF667Q5HYK9 610 aa14.99□□□□□ -0.01
ATPAF2-208ENST00000496852 SPECC1LQ69YQ0 1117 aa14.99□□□□□ -0.01
ATPAF2-208ENST00000496852 FIBCD1Q8N539 461 aa14.99□□□□□ -0.01
ATPAF2-208ENST00000496852 FAXDC2Q96IV6 333 aa14.99□□□□□ -0.01
ATPAF2-208ENST00000496852 TTYH3Q9C0H2 523 aa14.99□□□□□ -0.01
ATPAF2-208ENST00000496852 PRO3102Q9H379 93 aa14.99□□□□□ -0.01
ATPAF2-208ENST00000496852 MARCH5Q9NX47 278 aa14.99□□□□□ -0.01
ATPAF2-208ENST00000496852 GDAP2Q9NXN4 497 aa14.99□□□□□ -0.01
ATPAF2-208ENST00000496852 MYH10P35580 1976 aa14.98□□□□□ -0.01
ATPAF2-208ENST00000496852 LCHNA4D1U4 455 aa14.98□□□□□ -0.01
ATPAF2-208ENST00000496852 UCHL3P15374 230 aa14.98□□□□□ -0.01
ATPAF2-208ENST00000496852 LAG3P18627 525 aa14.98□□□□□ -0.01
ATPAF2-208ENST00000496852 PAX3P23760 479 aa14.98□□□□□ -0.01
ATPAF2-208ENST00000496852 PBX3P40426 434 aa14.98□□□□□ -0.01
ATPAF2-208ENST00000496852 RABGGTBP53611 331 aa14.98□□□□□ -0.01
ATPAF2-208ENST00000496852 FIGNQ5HY92 759 aa14.98□□□□□ -0.01
ATPAF2-208ENST00000496852 GJB7Q6PEY0 223 aa14.98□□□□□ -0.01
ATPAF2-208ENST00000496852 KCNT2Q6UVM3 1135 aa14.98□□□□□ -0.01
ATPAF2-208ENST00000496852 TDHQ8IZJ6 230 aa14.98□□□□□ -0.01
ATPAF2-208ENST00000496852 NEK11Q8NG66 645 aa14.98□□□□□ -0.01
ATPAF2-208ENST00000496852 CLP1Q92989 425 aaKnown RBP14.98□□□□□ -0.01
ATPAF2-208ENST00000496852 NAA15Q9BXJ9 866 aaKnown RBP14.98□□□□□ -0.01
ATPAF2-208ENST00000496852 NIF3L1Q9GZT8 377 aa14.98□□□□□ -0.01
ATPAF2-208ENST00000496852 FBXL5Q9UKA1 691 aa14.98□□□□□ -0.01
ATPAF2-208ENST00000496852 AJAP1Q9UKB5 411 aaPredicted RBP14.98□□□□□ -0.01
ATPAF2-208ENST00000496852 POLIQ9UNA4 740 aa14.98□□□□□ -0.01
ATPAF2-208ENST00000496852 FAN1Q9Y2M0 1017 aa14.98□□□□□ -0.01
ATPAF2-208ENST00000496852 PRG3Q9Y2Y8 225 aaPredicted RBP14.98□□□□□ -0.01
ATPAF2-208ENST00000496852 NT5C1B-RDH14C9J2C7 533 aa14.97□□□□□ -0.01
ATPAF2-208ENST00000496852 ASPAP45381 313 aa14.97□□□□□ -0.01
ATPAF2-208ENST00000496852 ALDH7A1P49419 539 aaKnown RBP14.97□□□□□ -0.01
ATPAF2-208ENST00000496852 GCNT1Q02742 428 aa14.97□□□□□ -0.01
ATPAF2-208ENST00000496852 TIGD5Q53EQ6 642 aa14.97□□□□□ -0.01
ATPAF2-208ENST00000496852 TMEM173Q86WV6 379 aaPredicted RBP14.97□□□□□ -0.01
ATPAF2-208ENST00000496852 PPM1KQ8N3J5 372 aa14.97□□□□□ -0.01
ATPAF2-208ENST00000496852 COLGALT1Q8NBJ5 622 aa14.97□□□□□ -0.01
ATPAF2-208ENST00000496852 HASPINQ8TF76 798 aa14.97□□□□□ -0.01
ATPAF2-208ENST00000496852 CPLX3Q8WVH0 158 aa14.97□□□□□ -0.01
ATPAF2-208ENST00000496852 NUP58Q9BVL2 599 aa14.97□□□□□ -0.01
ATPAF2-208ENST00000496852 COLEC11Q9BWP8 271 aa14.97□□□□□ -0.01
ATPAF2-208ENST00000496852 BCO2Q9BYV7 579 aa14.97□□□□□ -0.01
ATPAF2-208ENST00000496852 NXF1Q9UBU9 619 aaKnown RBP14.97□□□□□ -0.01
ATPAF2-208ENST00000496852 ADAM28Q9UKQ2 775 aa14.97□□□□□ -0.01
ATPAF2-208ENST00000496852 DAAM1Q9Y4D1 1078 aa14.97□□□□□ -0.01
ATPAF2-208ENST00000496852 SNX9Q9Y5X1 595 aa14.97□□□□□ -0.01
ATPAF2-208ENST00000496852 FHOD1Q9Y613 1164 aa14.97□□□□□ -0.01
ATPAF2-208ENST00000496852 PTPRDP23468 1912 aa14.97□□□□□ -0.01
ATPAF2-208ENST00000496852 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.97□□□□□ -0.01
ATPAF2-208ENST00000496852 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.97□□□□□ -0.01
ATPAF2-208ENST00000496852 CARNS1A5YM72 827 aa14.97□□□□□ -0.01
ATPAF2-208ENST00000496852 TRIM21P19474 475 aaKnown RBP14.97□□□□□ -0.01
ATPAF2-208ENST00000496852 RFX1P22670 979 aa14.97□□□□□ -0.01
ATPAF2-208ENST00000496852 BRCC3P46736 316 aa14.97□□□□□ -0.01
ATPAF2-208ENST00000496852 POLR2FP61218 127 aaKnown RBP14.97□□□□□ -0.01
ATPAF2-208ENST00000496852 CUL2Q13617 745 aa14.97□□□□□ -0.01
ATPAF2-208ENST00000496852 SPOUT1Q5T280 376 aaKnown RBP14.97□□□□□ -0.01
ATPAF2-208ENST00000496852 IQCEQ6IPM2 695 aa14.97□□□□□ -0.01
ATPAF2-208ENST00000496852 RRAGAQ7L523 313 aa14.97□□□□□ -0.01
ATPAF2-208ENST00000496852 LIMS2Q7Z4I7 341 aa14.97□□□□□ -0.01
ATPAF2-208ENST00000496852 PPFIBP1Q86W92 1011 aa14.97□□□□□ -0.01
ATPAF2-208ENST00000496852 BCL7CQ8WUZ0 217 aaPredicted RBP14.97□□□□□ -0.01
ATPAF2-208ENST00000496852 KAT5Q92993 513 aa14.97□□□□□ -0.01
ATPAF2-208ENST00000496852 SENP8Q96LD8 212 aa14.97□□□□□ -0.01
ATPAF2-208ENST00000496852 KREMEN1Q96MU8 473 aa14.97□□□□□ -0.01
ATPAF2-208ENST00000496852 ZNF558Q96NG5 402 aa14.97□□□□□ -0.01
ATPAF2-208ENST00000496852 PPP1R9BQ96SB3 815 aa14.97□□□□□ -0.01
ATPAF2-208ENST00000496852 ARID3AQ99856 593 aa14.97□□□□□ -0.01
ATPAF2-208ENST00000496852 UBE2TQ9NPD8 197 aaPredicted RBP14.97□□□□□ -0.01
ATPAF2-208ENST00000496852 CEP72Q9P209 647 aa14.97□□□□□ -0.01
ATPAF2-208ENST00000496852 DNAJC12Q9UKB3 198 aa14.97□□□□□ -0.01
ATPAF2-208ENST00000496852 PCDHA11Q9Y5I1 949 aa14.97□□□□□ -0.01
ATPAF2-208ENST00000496852 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.97□□□□□ -0.01
ATPAF2-208ENST00000496852 LINC01553A4QN01 128 aa14.96□□□□□ -0.01
ATPAF2-208ENST00000496852 M0QZQ0 153 aa14.96□□□□□ -0.01
ATPAF2-208ENST00000496852 CLSTN1O94985 981 aa14.96□□□□□ -0.01
ATPAF2-208ENST00000496852 EFEMP2O95967 443 aa14.96□□□□□ -0.01
ATPAF2-208ENST00000496852 GYPCP04921 128 aa14.96□□□□□ -0.01
ATPAF2-208ENST00000496852 TPM1P09493 284 aa14.96□□□□□ -0.01
ATPAF2-208ENST00000496852 P4HA1P13674 534 aa14.96□□□□□ -0.01
ATPAF2-208ENST00000496852 MYOGP15173 224 aa14.96□□□□□ -0.01
ATPAF2-208ENST00000496852 TBXAS1P24557 533 aaPredicted RBP14.96□□□□□ -0.01
ATPAF2-208ENST00000496852 TNNC1P63316 161 aa14.96□□□□□ -0.01
ATPAF2-208ENST00000496852 TBX2Q13207 712 aaPredicted RBP14.96□□□□□ -0.01
ATPAF2-208ENST00000496852 SLC39A11Q8N1S5 342 aa14.96□□□□□ -0.01
ATPAF2-208ENST00000496852 UBR7Q8N806 425 aa14.96□□□□□ -0.01
ATPAF2-208ENST00000496852 IQCDQ96DY2 449 aa14.96□□□□□ -0.01
ATPAF2-208ENST00000496852 IGSF21Q96ID5 467 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms