RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 ELAVL2Q12926 359 aaKnown RBP23.39■■□□□ 1.33
C9orf3-222ENST00000496567 C17orf80Q9BSJ5 609 aa23.39■■□□□ 1.33
C9orf3-222ENST00000496567 CRACR2AQ9BSW2 395 aa23.39■■□□□ 1.33
C9orf3-222ENST00000496567 SF3B1O75533 1304 aaKnown RBP eCLIP23.38■■□□□ 1.33
C9orf3-222ENST00000496567 ARHGEF37A1IGU5 675 aa23.38■■□□□ 1.33
C9orf3-222ENST00000496567 C5orf67F2Z3F1 127 aa23.38■■□□□ 1.33
C9orf3-222ENST00000496567 F8W810 466 aa23.38■■□□□ 1.33
C9orf3-222ENST00000496567 ITGB1P05556 798 aa23.38■■□□□ 1.33
C9orf3-222ENST00000496567 AARSP49588 968 aaKnown RBP eCLIP23.38■■□□□ 1.33
C9orf3-222ENST00000496567 WDR72Q3MJ13 1102 aa23.38■■□□□ 1.33
C9orf3-222ENST00000496567 ZNF667Q5HYK9 610 aa23.38■■□□□ 1.33
C9orf3-222ENST00000496567 CD300LGQ6UXG3 332 aa23.38■■□□□ 1.33
C9orf3-222ENST00000496567 TMEM173Q86WV6 379 aaPredicted RBP23.38■■□□□ 1.33
C9orf3-222ENST00000496567 NAP1L5Q96NT1 182 aaPredicted RBP23.38■■□□□ 1.33
C9orf3-222ENST00000496567 GDAP2Q9NXN4 497 aa23.38■■□□□ 1.33
C9orf3-222ENST00000496567 NLRC5Q86WI3 1866 aa23.38■■□□□ 1.33
C9orf3-222ENST00000496567 SCN1AP35498 2009 aa23.37■■□□□ 1.33
C9orf3-222ENST00000496567 LAMA2P24043 3122 aaKnown RBP23.37■■□□□ 1.33
C9orf3-222ENST00000496567 CBFA2T2O43439 604 aa23.37■■□□□ 1.33
C9orf3-222ENST00000496567 FGF18O76093 207 aa23.37■■□□□ 1.33
C9orf3-222ENST00000496567 P4HA1P13674 534 aa23.37■■□□□ 1.33
C9orf3-222ENST00000496567 NOP14P78316 857 aaKnown RBP23.37■■□□□ 1.33
C9orf3-222ENST00000496567 PLCB2Q00722 1185 aa23.37■■□□□ 1.33
C9orf3-222ENST00000496567 PLCB3Q01970 1234 aa23.37■■□□□ 1.33
C9orf3-222ENST00000496567 FUT10Q6P4F1 479 aa23.37■■□□□ 1.33
C9orf3-222ENST00000496567 DSTYKQ6XUX3 929 aa23.37■■□□□ 1.33
C9orf3-222ENST00000496567 KLHL23Q8NBE8 558 aa23.37■■□□□ 1.33
C9orf3-222ENST00000496567 LMO3Q8TAP4 145 aa23.37■■□□□ 1.33
C9orf3-222ENST00000496567 SUSD3Q96L08 255 aa23.37■■□□□ 1.33
C9orf3-222ENST00000496567 PI4K2AQ9BTU6 479 aa23.37■■□□□ 1.33
C9orf3-222ENST00000496567 C11orf84Q9BUA3 381 aaPredicted RBP23.37■■□□□ 1.33
C9orf3-222ENST00000496567 INTS2Q9H0H0 1204 aaKnown RBP23.37■■□□□ 1.33
C9orf3-222ENST00000496567 IFNKQ9P0W0 207 aa23.37■■□□□ 1.33
C9orf3-222ENST00000496567 SPTLC1O15269 473 aa23.36■■□□□ 1.33
C9orf3-222ENST00000496567 IGFBP6P24592 240 aaPredicted RBP23.36■■□□□ 1.33
C9orf3-222ENST00000496567 BRCC3P46736 316 aa23.36■■□□□ 1.33
C9orf3-222ENST00000496567 TNNC1P63316 161 aa23.36■■□□□ 1.33
C9orf3-222ENST00000496567 NR1I3Q14994 352 aa23.36■■□□□ 1.33
C9orf3-222ENST00000496567 TIGD5Q53EQ6 642 aa23.36■■□□□ 1.33
C9orf3-222ENST00000496567 SARM1Q6SZW1 724 aa23.36■■□□□ 1.33
C9orf3-222ENST00000496567 BCL7CQ8WUZ0 217 aaPredicted RBP23.36■■□□□ 1.33
C9orf3-222ENST00000496567 FAXDC2Q96IV6 333 aa23.36■■□□□ 1.33
C9orf3-222ENST00000496567 SENP8Q96LD8 212 aa23.36■■□□□ 1.33
C9orf3-222ENST00000496567 MTUS1Q9ULD2 1270 aa23.36■■□□□ 1.33
C9orf3-222ENST00000496567 SNX9Q9Y5X1 595 aa23.36■■□□□ 1.33
C9orf3-222ENST00000496567 M0QZQ0 153 aa23.35■■□□□ 1.33
C9orf3-222ENST00000496567 TRIM65Q6PJ69 517 aa23.35■■□□□ 1.33
C9orf3-222ENST00000496567 DDX53Q86TM3 631 aaKnown RBP23.35■■□□□ 1.33
C9orf3-222ENST00000496567 NT5C1BQ96P26 610 aa23.35■■□□□ 1.33
C9orf3-222ENST00000496567 ERGIC2Q96RQ1 377 aa23.35■■□□□ 1.33
C9orf3-222ENST00000496567 NXF1Q9UBU9 619 aaKnown RBP23.35■■□□□ 1.33
C9orf3-222ENST00000496567 PUF60Q9UHX1 559 aaKnown RBP23.35■■□□□ 1.33
C9orf3-222ENST00000496567 CYB561D2O14569 222 aa23.35■■□□□ 1.33
C9orf3-222ENST00000496567 TEX33O43247 280 aa23.35■■□□□ 1.33
C9orf3-222ENST00000496567 HUS1O60921 280 aa23.35■■□□□ 1.33
C9orf3-222ENST00000496567 LRRN2O75325 713 aa23.35■■□□□ 1.33
C9orf3-222ENST00000496567 ODC1P11926 461 aa23.35■■□□□ 1.33
C9orf3-222ENST00000496567 SLC9A1P19634 815 aa23.35■■□□□ 1.33
C9orf3-222ENST00000496567 PON1P27169 355 aa23.35■■□□□ 1.33
C9orf3-222ENST00000496567 SPOPLQ6IQ16 392 aa23.35■■□□□ 1.33
C9orf3-222ENST00000496567 DPH6Q7L8W6 267 aa23.35■■□□□ 1.33
C9orf3-222ENST00000496567 FBXO22Q8NEZ5 403 aa23.35■■□□□ 1.33
C9orf3-222ENST00000496567 GPR62Q9BZJ7 368 aa23.35■■□□□ 1.33
C9orf3-222ENST00000496567 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.35■■□□□ 1.33
C9orf3-222ENST00000496567 LZTS1Q9Y250 596 aa23.35■■□□□ 1.33
C9orf3-222ENST00000496567 KCNMA1Q12791 1236 aa23.34■■□□□ 1.33
C9orf3-222ENST00000496567 SYCP1Q15431 976 aa23.34■■□□□ 1.33
C9orf3-222ENST00000496567 MMS19Q96T76 1030 aa23.34■■□□□ 1.33
C9orf3-222ENST00000496567 XPO4Q9C0E2 1151 aaKnown RBP23.34■■□□□ 1.33
C9orf3-222ENST00000496567 NIF3L1Q9GZT8 377 aa23.34■■□□□ 1.33
C9orf3-222ENST00000496567 APOBEC3GQ9HC16 384 aaKnown RBP23.34■■□□□ 1.33
C9orf3-222ENST00000496567 DSEQ9UL01 958 aa23.34■■□□□ 1.33
C9orf3-222ENST00000496567 PCDHB8Q9UN66 801 aa23.34■■□□□ 1.33
C9orf3-222ENST00000496567 A0A1W2PQC6 194 aa23.33■■□□□ 1.33
C9orf3-222ENST00000496567 GOLGA6L3A6NEY3 463 aa23.33■■□□□ 1.33
C9orf3-222ENST00000496567 I3L4J1 428 aa23.33■■□□□ 1.33
C9orf3-222ENST00000496567 SYN3O14994 580 aa23.33■■□□□ 1.33
C9orf3-222ENST00000496567 EFEMP2O95967 443 aa23.33■■□□□ 1.33
C9orf3-222ENST00000496567 SOD2P04179 222 aa23.33■■□□□ 1.33
C9orf3-222ENST00000496567 UBE3AQ05086 875 aa23.33■■□□□ 1.33
C9orf3-222ENST00000496567 LRMPQ12912 555 aa23.33■■□□□ 1.33
C9orf3-222ENST00000496567 USP41Q3LFD5 358 aa23.33■■□□□ 1.33
C9orf3-222ENST00000496567 FAM171A1Q5VUB5 890 aa23.33■■□□□ 1.33
C9orf3-222ENST00000496567 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.33■■□□□ 1.33
C9orf3-222ENST00000496567 SPRED2Q7Z698 418 aa23.33■■□□□ 1.33
C9orf3-222ENST00000496567 RNF168Q8IYW5 571 aaPredicted RBP23.33■■□□□ 1.33
C9orf3-222ENST00000496567 TOP6BLQ8N6T0 577 aa23.33■■□□□ 1.33
C9orf3-222ENST00000496567 APPL2Q8NEU8 664 aa23.33■■□□□ 1.33
C9orf3-222ENST00000496567 FAM81BQ96LP2 452 aa23.33■■□□□ 1.33
C9orf3-222ENST00000496567 PCMTD1Q96MG8 357 aaPredicted RBP23.33■■□□□ 1.33
C9orf3-222ENST00000496567 TRIM5Q9C035 493 aa23.33■■□□□ 1.33
C9orf3-222ENST00000496567 TMEM265A0A087WTH1 108 aa23.32■■□□□ 1.32
C9orf3-222ENST00000496567 FAM163BP0C2L3 166 aa23.32■■□□□ 1.32
C9orf3-222ENST00000496567 TYMPP19971 482 aa23.32■■□□□ 1.32
C9orf3-222ENST00000496567 TBXAS1P24557 533 aaPredicted RBP23.32■■□□□ 1.32
C9orf3-222ENST00000496567 TMEM86AQ8N2M4 240 aa23.32■■□□□ 1.32
C9orf3-222ENST00000496567 ARNTL2Q8WYA1 636 aa23.32■■□□□ 1.32
C9orf3-222ENST00000496567 TATDN2Q93075 761 aa23.32■■□□□ 1.32
C9orf3-222ENST00000496567 ELMO3Q96BJ8 720 aa23.32■■□□□ 1.32
C9orf3-222ENST00000496567 PLCB1Q9NQ66 1216 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms