RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-233ENST00000495899 H7C4K7 107 aa13.39□□□□□ -0.27
MRPL55-233ENST00000495899 M0QZQ0 153 aa13.39□□□□□ -0.27
MRPL55-233ENST00000495899 TNFRSF10AO00220 468 aa13.39□□□□□ -0.27
MRPL55-233ENST00000495899 PIRO00625 290 aa13.39□□□□□ -0.27
MRPL55-233ENST00000495899 TGM5O43548 720 aa13.39□□□□□ -0.27
MRPL55-233ENST00000495899 RHOBTB3O94955 611 aa13.39□□□□□ -0.27
MRPL55-233ENST00000495899 PAPLNO95428 1278 aa13.39□□□□□ -0.27
MRPL55-233ENST00000495899 HOXB1P14653 301 aaPredicted RBP13.39□□□□□ -0.27
MRPL55-233ENST00000495899 TKTP29401 623 aaKnown RBP13.39□□□□□ -0.27
MRPL55-233ENST00000495899 MCM4P33991 863 aa13.39□□□□□ -0.27
MRPL55-233ENST00000495899 MTHFRP42898 656 aa13.39□□□□□ -0.27
MRPL55-233ENST00000495899 AARSP49588 968 aaKnown RBP eCLIP13.39□□□□□ -0.27
MRPL55-233ENST00000495899 ZP2Q05996 745 aa13.39□□□□□ -0.27
MRPL55-233ENST00000495899 SNW1Q13573 536 aaKnown RBP13.39□□□□□ -0.27
MRPL55-233ENST00000495899 RAB33AQ14088 237 aa13.39□□□□□ -0.27
MRPL55-233ENST00000495899 MRPL58Q14197 206 aaKnown RBP13.39□□□□□ -0.27
MRPL55-233ENST00000495899 KCNB1Q14721 858 aa13.39□□□□□ -0.27
MRPL55-233ENST00000495899 ATAT1Q5SQI0 421 aa13.39□□□□□ -0.27
MRPL55-233ENST00000495899 C15orf39Q6ZRI6 1047 aa13.39□□□□□ -0.27
MRPL55-233ENST00000495899 RTL10Q7L3V2 364 aa13.39□□□□□ -0.27
MRPL55-233ENST00000495899 PALB2Q86YC2 1186 aa13.39□□□□□ -0.27
MRPL55-233ENST00000495899 NELFCDQ8IXH7 590 aa13.39□□□□□ -0.27
MRPL55-233ENST00000495899 ELOA2Q8IYF1 753 aaPredicted RBP13.39□□□□□ -0.27
MRPL55-233ENST00000495899 GJD3Q8N144 294 aa13.39□□□□□ -0.27
MRPL55-233ENST00000495899 CMASQ8NFW8 434 aaPredicted RBP13.39□□□□□ -0.27
MRPL55-233ENST00000495899 RIPOR3Q96MK2 946 aa13.39□□□□□ -0.27
MRPL55-233ENST00000495899 TIGD1Q96MW7 591 aa13.39□□□□□ -0.27
MRPL55-233ENST00000495899 NECAB3Q96P71 396 aaPredicted RBP13.39□□□□□ -0.27
MRPL55-233ENST00000495899 RHOBTB2Q9BYZ6 727 aa13.39□□□□□ -0.27
MRPL55-233ENST00000495899 ZMYND15Q9H091 742 aa13.39□□□□□ -0.27
MRPL55-233ENST00000495899 DPP3Q9NY33 737 aa13.39□□□□□ -0.27
MRPL55-233ENST00000495899 HSPBP1Q9NZL4 362 aa13.39□□□□□ -0.27
MRPL55-233ENST00000495899 ARHGEF37A1IGU5 675 aa13.38□□□□□ -0.27
MRPL55-233ENST00000495899 GOLGA8IPA6NC78 632 aa13.38□□□□□ -0.27
MRPL55-233ENST00000495899 GOLGA8JA6NMD2 632 aa13.38□□□□□ -0.27
MRPL55-233ENST00000495899 I3L4J1 428 aa13.38□□□□□ -0.27
MRPL55-233ENST00000495899 RPL17P18621 184 aaKnown RBP13.38□□□□□ -0.27
MRPL55-233ENST00000495899 OR1D2P34982 312 aa13.38□□□□□ -0.27
MRPL55-233ENST00000495899 LILRA4P59901 499 aa13.38□□□□□ -0.27
MRPL55-233ENST00000495899 VARS2Q5ST30 1063 aaKnown RBP13.38□□□□□ -0.27
MRPL55-233ENST00000495899 C9orf57Q5W0N0 161 aa13.38□□□□□ -0.27
MRPL55-233ENST00000495899 SLC8B1Q6J4K2 584 aa13.38□□□□□ -0.27
MRPL55-233ENST00000495899 GPR149Q86SP6 731 aa13.38□□□□□ -0.27
MRPL55-233ENST00000495899 XXYLT1Q8NBI6 393 aa13.38□□□□□ -0.27
MRPL55-233ENST00000495899 KIAA0895Q8NCT3 520 aa13.38□□□□□ -0.27
MRPL55-233ENST00000495899 ZSWIM2Q8NEG5 633 aa13.38□□□□□ -0.27
MRPL55-233ENST00000495899 PHF7Q9BWX1 381 aaPredicted RBP13.38□□□□□ -0.27
MRPL55-233ENST00000495899 MAN1C1Q9NR34 630 aa13.38□□□□□ -0.27
MRPL55-233ENST00000495899 ZDHHC7Q9NXF8 308 aa13.38□□□□□ -0.27
MRPL55-233ENST00000495899 HOOK1Q9UJC3 728 aaKnown RBP13.38□□□□□ -0.27
MRPL55-233ENST00000495899 BRWD1Q9NSI6 2320 aa13.38□□□□□ -0.27
MRPL55-233ENST00000495899 SPTBN5Q9NRC6 3674 aaKnown RBP13.37□□□□□ -0.27
MRPL55-233ENST00000495899 PDXKO00764 312 aa13.37□□□□□ -0.27
MRPL55-233ENST00000495899 TBC1D4O60343 1298 aa13.37□□□□□ -0.27
MRPL55-233ENST00000495899 ZMYND10O75800 440 aa13.37□□□□□ -0.27
MRPL55-233ENST00000495899 OAZ2O95190 189 aa13.37□□□□□ -0.27
MRPL55-233ENST00000495899 PNPLA4P41247 253 aa13.37□□□□□ -0.27
MRPL55-233ENST00000495899 TFAMQ00059 246 aaKnown RBP13.37□□□□□ -0.27
MRPL55-233ENST00000495899 MYBPC2Q14324 1141 aa13.37□□□□□ -0.27
MRPL55-233ENST00000495899 SNRNP35Q16560 246 aaKnown RBP13.37□□□□□ -0.27
MRPL55-233ENST00000495899 UVSSAQ2YD98 709 aa13.37□□□□□ -0.27
MRPL55-233ENST00000495899 RARS2Q5T160 578 aaKnown RBP13.37□□□□□ -0.27
MRPL55-233ENST00000495899 DSTYKQ6XUX3 929 aa13.37□□□□□ -0.27
MRPL55-233ENST00000495899 SLC9A9Q8IVB4 645 aa13.37□□□□□ -0.27
MRPL55-233ENST00000495899 EFCAB13Q8IY85 973 aa13.37□□□□□ -0.27
MRPL55-233ENST00000495899 C12orf76Q8N812 135 aaPredicted RBP13.37□□□□□ -0.27
MRPL55-233ENST00000495899 KREMEN2Q8NCW0 462 aa13.37□□□□□ -0.27
MRPL55-233ENST00000495899 GSDMAQ96QA5 445 aa13.37□□□□□ -0.27
MRPL55-233ENST00000495899 APOL5Q9BWW9 433 aa13.37□□□□□ -0.27
MRPL55-233ENST00000495899 GTPBP4Q9BZE4 634 aaKnown RBP13.37□□□□□ -0.27
MRPL55-233ENST00000495899 PDE11AQ9HCR9 933 aa13.37□□□□□ -0.27
MRPL55-233ENST00000495899 RMND1Q9NWS8 449 aa13.37□□□□□ -0.27
MRPL55-233ENST00000495899 MAFFQ9ULX9 164 aa13.37□□□□□ -0.27
MRPL55-233ENST00000495899 CDY1Q9Y6F8 540 aa13.37□□□□□ -0.27
MRPL55-233ENST00000495899 CCDC195A0A1B0GUA6 201 aa13.36□□□□□ -0.27
MRPL55-233ENST00000495899 LOC730098B7Z3J9 87 aa13.36□□□□□ -0.27
MRPL55-233ENST00000495899 PRPF40AO75400 957 aaKnown RBP13.36□□□□□ -0.27
MRPL55-233ENST00000495899 SMC2O95347 1197 aa13.36□□□□□ -0.27
MRPL55-233ENST00000495899 SPATA31D3P0C874 917 aa13.36□□□□□ -0.27
MRPL55-233ENST00000495899 TYMPP19971 482 aa13.36□□□□□ -0.27
MRPL55-233ENST00000495899 SSTR3P32745 418 aaPredicted RBP13.36□□□□□ -0.27
MRPL55-233ENST00000495899 GUCY2FP51841 1108 aa13.36□□□□□ -0.27
MRPL55-233ENST00000495899 YWHAHQ04917 246 aaPredicted RBP13.36□□□□□ -0.27
MRPL55-233ENST00000495899 RSPO2Q6UXX9 243 aaPredicted RBP13.36□□□□□ -0.27
MRPL55-233ENST00000495899 TMC5Q6UXY8 1006 aa13.36□□□□□ -0.27
MRPL55-233ENST00000495899 SPATA31D4Q6ZUB0 917 aa13.36□□□□□ -0.27
MRPL55-233ENST00000495899 CBWD2Q8IUF1 395 aa13.36□□□□□ -0.27
MRPL55-233ENST00000495899 GLYCTKQ8IVS8 523 aa13.36□□□□□ -0.27
MRPL55-233ENST00000495899 ZNF454Q8N9F8 522 aa13.36□□□□□ -0.27
MRPL55-233ENST00000495899 ZNF461Q8TAF7 563 aa13.36□□□□□ -0.27
MRPL55-233ENST00000495899 NOC3LQ8WTT2 800 aaKnown RBP13.36□□□□□ -0.27
MRPL55-233ENST00000495899 KCTD10Q9H3F6 313 aa13.36□□□□□ -0.27
MRPL55-233ENST00000495899 FBXW11Q9UKB1 542 aa13.36□□□□□ -0.27
MRPL55-233ENST00000495899 ITGA11Q9UKX5 1188 aa13.36□□□□□ -0.27
MRPL55-233ENST00000495899 DSEQ9UL01 958 aa13.36□□□□□ -0.27
MRPL55-233ENST00000495899 TTC28Q96AY4 2481 aa13.36□□□□□ -0.27
MRPL55-233ENST00000495899 BDP1A6H8Y1 2624 aa13.36□□□□□ -0.27
MRPL55-233ENST00000495899 PPEF2O14830 753 aa13.35□□□□□ -0.27
MRPL55-233ENST00000495899 CLIC2O15247 247 aa13.35□□□□□ -0.27
MRPL55-233ENST00000495899 SPTLC1O15269 473 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms