RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 PREPLQ4J6C6 727 aaPredicted RBP6.78□□□□□ -1.32
NCKAP1-208ENST00000495619 FLYWCH1Q4VC44 716 aa6.78□□□□□ -1.32
NCKAP1-208ENST00000495619 CCDC93Q567U6 631 aa6.78□□□□□ -1.32
NCKAP1-208ENST00000495619 Q6YL49 198 aa6.78□□□□□ -1.32
NCKAP1-208ENST00000495619 HEATR3Q7Z4Q2 680 aa6.78□□□□□ -1.32
NCKAP1-208ENST00000495619 SLC17A8Q8NDX2 589 aa6.78□□□□□ -1.32
NCKAP1-208ENST00000495619 SCAMP4Q969E2 229 aa6.78□□□□□ -1.32
NCKAP1-208ENST00000495619 MTFMTQ96DP5 389 aaKnown RBP6.78□□□□□ -1.32
NCKAP1-208ENST00000495619 MVB12AQ96EY5 273 aa6.78□□□□□ -1.32
NCKAP1-208ENST00000495619 PTCD3Q96EY7 689 aaKnown RBP6.78□□□□□ -1.32
NCKAP1-208ENST00000495619 DMRTA2Q96SC8 542 aa6.78□□□□□ -1.32
NCKAP1-208ENST00000495619 ZNF180Q9UJW8 692 aa6.78□□□□□ -1.32
NCKAP1-208ENST00000495619 PCDHA3Q9Y5H8 950 aa6.78□□□□□ -1.32
NCKAP1-208ENST00000495619 GRID2IPA4D2P6 1211 aa6.77□□□□□ -1.33
NCKAP1-208ENST00000495619 F2RL2O00254 374 aa6.77□□□□□ -1.33
NCKAP1-208ENST00000495619 GNAI2P04899 355 aa6.77□□□□□ -1.33
NCKAP1-208ENST00000495619 U2AF1L5P0DN76 240 aaPredicted RBP6.77□□□□□ -1.33
NCKAP1-208ENST00000495619 KCNA2P16389 499 aa6.77□□□□□ -1.33
NCKAP1-208ENST00000495619 KRT4P19013 534 aa6.77□□□□□ -1.33
NCKAP1-208ENST00000495619 SLC6A4P31645 630 aa6.77□□□□□ -1.33
NCKAP1-208ENST00000495619 PIK3CGP48736 1102 aa6.77□□□□□ -1.33
NCKAP1-208ENST00000495619 FXR1P51114 621 aaKnown RBP eCLIP6.77□□□□□ -1.331e-6■■■□□ 19
NCKAP1-208ENST00000495619 HK3P52790 923 aa6.77□□□□□ -1.33
NCKAP1-208ENST00000495619 INHBEP58166 350 aa6.77□□□□□ -1.33
NCKAP1-208ENST00000495619 RPS7P62081 194 aaKnown RBP6.77□□□□□ -1.33
NCKAP1-208ENST00000495619 U2AF1Q01081 240 aaKnown RBP eCLIP6.77□□□□□ -1.33
NCKAP1-208ENST00000495619 SLFN5Q08AF3 891 aa6.77□□□□□ -1.33
NCKAP1-208ENST00000495619 SP5Q6BEB4 398 aaPredicted RBP6.77□□□□□ -1.33
NCKAP1-208ENST00000495619 Q6ZPA2 131 aa6.77□□□□□ -1.33
NCKAP1-208ENST00000495619 ASB10Q8WXI3 467 aa6.77□□□□□ -1.33
NCKAP1-208ENST00000495619 FUBP1Q96AE4 644 aaKnown RBP6.77□□□□□ -1.33
NCKAP1-208ENST00000495619 PUS7Q96PZ0 661 aaKnown RBP6.77□□□□□ -1.33
NCKAP1-208ENST00000495619 CAMKK2Q96RR4 588 aa6.77□□□□□ -1.33
NCKAP1-208ENST00000495619 SMOQ99835 787 aa6.77□□□□□ -1.33
NCKAP1-208ENST00000495619 LMBRD1Q9NUN5 540 aa6.77□□□□□ -1.33
NCKAP1-208ENST00000495619 ABCF2Q9UG63 623 aa6.77□□□□□ -1.33
NCKAP1-208ENST00000495619 CCDC195A0A1B0GUA6 201 aa6.76□□□□□ -1.33
NCKAP1-208ENST00000495619 SUV39H1O43463 412 aa6.76□□□□□ -1.33
NCKAP1-208ENST00000495619 ABLIM3O94929 683 aa6.76□□□□□ -1.33
NCKAP1-208ENST00000495619 ESRRBO95718 433 aa6.76□□□□□ -1.33
NCKAP1-208ENST00000495619 GJB1P08034 283 aa6.76□□□□□ -1.33
NCKAP1-208ENST00000495619 HSPA6P17066 643 aa6.76□□□□□ -1.33
NCKAP1-208ENST00000495619 IL12RB1P42701 662 aa6.76□□□□□ -1.33
NCKAP1-208ENST00000495619 IFIT1BQ5T764 474 aaKnown RBP6.76□□□□□ -1.33
NCKAP1-208ENST00000495619 CATIPQ7Z7H3 387 aa6.76□□□□□ -1.33
NCKAP1-208ENST00000495619 GPR149Q86SP6 731 aa6.76□□□□□ -1.33
NCKAP1-208ENST00000495619 BEND2Q8NDZ0 799 aa6.76□□□□□ -1.33
NCKAP1-208ENST00000495619 STAG1Q8WVM7 1258 aa6.76□□□□□ -1.33
NCKAP1-208ENST00000495619 LINC00476Q8WZB0 136 aa6.76□□□□□ -1.33
NCKAP1-208ENST00000495619 DDX17Q92841 729 aaKnown RBP6.76□□□□□ -1.33
NCKAP1-208ENST00000495619 CDK5RAP3Q96JB5 506 aa6.76□□□□□ -1.33
NCKAP1-208ENST00000495619 KLHL32Q96NJ5 620 aa6.76□□□□□ -1.33
NCKAP1-208ENST00000495619 C11orf21Q9P2W6 132 aa6.76□□□□□ -1.33
NCKAP1-208ENST00000495619 HSFX1Q9UBD0 423 aa6.76□□□□□ -1.33
NCKAP1-208ENST00000495619 ZDHHC8Q9ULC8 765 aa6.76□□□□□ -1.33
NCKAP1-208ENST00000495619 PRAMEF33A0A0G2JMD5 474 aa6.75□□□□□ -1.33
NCKAP1-208ENST00000495619 A0A1W2PS29 197 aa6.75□□□□□ -1.33
NCKAP1-208ENST00000495619 TOR1BO14657 336 aa6.75□□□□□ -1.33
NCKAP1-208ENST00000495619 PRAMEF10O60809 474 aa6.75□□□□□ -1.33
NCKAP1-208ENST00000495619 PPFIA2O75334 1257 aa6.75□□□□□ -1.33
NCKAP1-208ENST00000495619 POU6F2P78424 691 aaPredicted RBP6.75□□□□□ -1.33
NCKAP1-208ENST00000495619 MCL1Q07820 350 aa6.75□□□□□ -1.33
NCKAP1-208ENST00000495619 SMN1Q16637 294 aaKnown RBP6.75□□□□□ -1.33
NCKAP1-208ENST00000495619 ODR4Q5SWX8 454 aa6.75□□□□□ -1.33
NCKAP1-208ENST00000495619 GRAMD1CQ8IYS0 662 aa6.75□□□□□ -1.33
NCKAP1-208ENST00000495619 CFAP52Q8N1V2 620 aa6.75□□□□□ -1.33
NCKAP1-208ENST00000495619 JPH3Q8WXH2 748 aaPredicted RBP6.75□□□□□ -1.33
NCKAP1-208ENST00000495619 ZG16BQ96DA0 208 aa6.75□□□□□ -1.33
NCKAP1-208ENST00000495619 C1GALT1C1Q96EU7 318 aa6.75□□□□□ -1.33
NCKAP1-208ENST00000495619 Q96MF0 132 aa6.75□□□□□ -1.33
NCKAP1-208ENST00000495619 TLR10Q9BXR5 811 aa6.75□□□□□ -1.33
NCKAP1-208ENST00000495619 GTPBP4Q9BZE4 634 aaKnown RBP6.75□□□□□ -1.33
NCKAP1-208ENST00000495619 UNKLQ9H9P5 680 aaKnown RBP6.75□□□□□ -1.33
NCKAP1-208ENST00000495619 SLAMF7Q9NQ25 335 aa6.75□□□□□ -1.33
NCKAP1-208ENST00000495619 CNNM1Q9NRU3 951 aa6.75□□□□□ -1.33
NCKAP1-208ENST00000495619 SYBUQ9NX95 663 aa6.75□□□□□ -1.33
NCKAP1-208ENST00000495619 LRRC14BA6NHZ5 514 aa6.74□□□□□ -1.33
NCKAP1-208ENST00000495619 NT5C1B-RDH14C9J2C7 533 aa6.74□□□□□ -1.33
NCKAP1-208ENST00000495619 E7ENX8 843 aa6.74□□□□□ -1.33
NCKAP1-208ENST00000495619 H3BUI4 141 aa6.74□□□□□ -1.33
NCKAP1-208ENST00000495619 ORC4O43929 436 aa6.74□□□□□ -1.33
NCKAP1-208ENST00000495619 SOAT2O75908 522 aa6.74□□□□□ -1.33
NCKAP1-208ENST00000495619 RARBP10826 455 aa6.74□□□□□ -1.33
NCKAP1-208ENST00000495619 PRDX5P30044 214 aa6.74□□□□□ -1.33
NCKAP1-208ENST00000495619 ANXA11P50995 505 aaKnown RBP6.74□□□□□ -1.33
NCKAP1-208ENST00000495619 SEC24CP53992 1094 aa6.74□□□□□ -1.33
NCKAP1-208ENST00000495619 PSMC1P62191 440 aaKnown RBP6.74□□□□□ -1.33
NCKAP1-208ENST00000495619 TAP2Q03519 686 aa6.74□□□□□ -1.33
NCKAP1-208ENST00000495619 GEN1Q17RS7 908 aa6.74□□□□□ -1.33
NCKAP1-208ENST00000495619 ANKRD13AQ8IZ07 590 aa6.74□□□□□ -1.33
NCKAP1-208ENST00000495619 SLC44A3Q8N4M1 653 aa6.74□□□□□ -1.33
NCKAP1-208ENST00000495619 CAMKK1Q8N5S9 505 aa6.74□□□□□ -1.33
NCKAP1-208ENST00000495619 PDPRQ8NCN5 879 aa6.74□□□□□ -1.33
NCKAP1-208ENST00000495619 TMIEQ8NEW7 156 aa6.74□□□□□ -1.33
NCKAP1-208ENST00000495619 BRIX1Q8TDN6 353 aaKnown RBP6.74□□□□□ -1.33
NCKAP1-208ENST00000495619 TNPO1Q92973 898 aaKnown RBP6.74□□□□□ -1.33
NCKAP1-208ENST00000495619 HPS3Q969F9 1004 aa6.74□□□□□ -1.33
NCKAP1-208ENST00000495619 NACC2Q96BF6 587 aa6.74□□□□□ -1.33
NCKAP1-208ENST00000495619 AIFM2Q9BRQ8 373 aa6.74□□□□□ -1.33
NCKAP1-208ENST00000495619 CNPPD1Q9BV87 410 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms