RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 EFHBQ8N7U6 833 aa13.03□□□□□ -0.32
CSNK1E-213ENST00000495232 OR5B17Q8NGF7 314 aa13.03□□□□□ -0.32
CSNK1E-213ENST00000495232 TMC2Q8TDI7 906 aa13.03□□□□□ -0.32
CSNK1E-213ENST00000495232 PIK3R5Q8WYR1 880 aa13.03□□□□□ -0.32
CSNK1E-213ENST00000495232 PABPC5Q96DU9 382 aaKnown RBP13.03□□□□□ -0.32
CSNK1E-213ENST00000495232 KLHL5Q96PQ7 755 aa13.03□□□□□ -0.32
CSNK1E-213ENST00000495232 FNIP2Q9P278 1114 aa13.03□□□□□ -0.32
CSNK1E-213ENST00000495232 PCDHB8Q9UN66 801 aa13.03□□□□□ -0.32
CSNK1E-213ENST00000495232 COG5Q9UP83 839 aa13.03□□□□□ -0.32
CSNK1E-213ENST00000495232 MYO7AQ13402 2215 aa13.03□□□□□ -0.32
CSNK1E-213ENST00000495232 LRRIQ3A6PVS8 624 aaPredicted RBP13.02□□□□□ -0.33
CSNK1E-213ENST00000495232 KPNA7A9QM74 516 aa13.02□□□□□ -0.33
CSNK1E-213ENST00000495232 M0QZQ0 153 aa13.02□□□□□ -0.33
CSNK1E-213ENST00000495232 CYB561D2O14569 222 aa13.02□□□□□ -0.33
CSNK1E-213ENST00000495232 PPEF2O14830 753 aa13.02□□□□□ -0.33
CSNK1E-213ENST00000495232 IKBKBO14920 756 aa13.02□□□□□ -0.33
CSNK1E-213ENST00000495232 STX10O60499 249 aa13.02□□□□□ -0.33
CSNK1E-213ENST00000495232 LILRB3O75022 631 aa13.02□□□□□ -0.33
CSNK1E-213ENST00000495232 CLASP2O75122 1294 aaKnown RBP13.02□□□□□ -0.33
CSNK1E-213ENST00000495232 GTF2F1P35269 517 aaKnown RBP eCLIP13.02□□□□□ -0.33
CSNK1E-213ENST00000495232 YWHAHQ04917 246 aaPredicted RBP13.02□□□□□ -0.33
CSNK1E-213ENST00000495232 ENPEPQ07075 957 aa13.02□□□□□ -0.33
CSNK1E-213ENST00000495232 VARS2Q5ST30 1063 aaKnown RBP13.02□□□□□ -0.33
CSNK1E-213ENST00000495232 TCERG1LQ5VWI1 586 aa13.02□□□□□ -0.33
CSNK1E-213ENST00000495232 LLGL2Q6P1M3 1020 aa13.02□□□□□ -0.33
CSNK1E-213ENST00000495232 FOXR2Q6PJQ5 311 aa13.02□□□□□ -0.33
CSNK1E-213ENST00000495232 PRSS55Q6UWB4 352 aaPredicted RBP13.02□□□□□ -0.33
CSNK1E-213ENST00000495232 GLYCTKQ8IVS8 523 aa13.02□□□□□ -0.33
CSNK1E-213ENST00000495232 LNX1Q8TBB1 728 aaPredicted RBP13.02□□□□□ -0.33
CSNK1E-213ENST00000495232 HPDLQ96IR7 371 aa13.02□□□□□ -0.33
CSNK1E-213ENST00000495232 SENP8Q96LD8 212 aa13.02□□□□□ -0.33
CSNK1E-213ENST00000495232 CEP63Q96MT8 703 aa13.02□□□□□ -0.33
CSNK1E-213ENST00000495232 RXFP1Q9HBX9 757 aa13.02□□□□□ -0.33
CSNK1E-213ENST00000495232 ARMCX3Q9UH62 379 aaPredicted RBP13.02□□□□□ -0.33
CSNK1E-213ENST00000495232 DPP7Q9UHL4 492 aa13.02□□□□□ -0.33
CSNK1E-213ENST00000495232 RWDD2AQ9UIY3 292 aa13.02□□□□□ -0.33
CSNK1E-213ENST00000495232 DSEQ9UL01 958 aa13.02□□□□□ -0.33
CSNK1E-213ENST00000495232 PTPRJQ12913 1337 aa13.02□□□□□ -0.33
CSNK1E-213ENST00000495232 TEX28O15482 410 aa13.01□□□□□ -0.33
CSNK1E-213ENST00000495232 HUS1O60921 280 aa13.01□□□□□ -0.33
CSNK1E-213ENST00000495232 GNA14O95837 355 aa13.01□□□□□ -0.33
CSNK1E-213ENST00000495232 GLUD1P00367 558 aa13.01□□□□□ -0.33
CSNK1E-213ENST00000495232 AARSP49588 968 aaKnown RBP eCLIP13.01□□□□□ -0.33
CSNK1E-213ENST00000495232 DLG4P78352 724 aa13.01□□□□□ -0.33
CSNK1E-213ENST00000495232 CLDN10P78369 228 aa13.01□□□□□ -0.33
CSNK1E-213ENST00000495232 ADAM15Q13444 863 aa13.01□□□□□ -0.33
CSNK1E-213ENST00000495232 AAK1Q2M2I8 961 aa13.01□□□□□ -0.33
CSNK1E-213ENST00000495232 CCDC40Q4G0X9 1142 aa13.01□□□□□ -0.33
CSNK1E-213ENST00000495232 CTXN3Q4LDR2 81 aa13.01□□□□□ -0.33
CSNK1E-213ENST00000495232 DCAF17Q5H9S7 520 aaPredicted RBP13.01□□□□□ -0.33
CSNK1E-213ENST00000495232 ZNF280DQ6N043 979 aa13.01□□□□□ -0.33
CSNK1E-213ENST00000495232 TTI2Q6NXR4 508 aa13.01□□□□□ -0.33
CSNK1E-213ENST00000495232 CAVIN1Q6NZI2 390 aaKnown RBP13.01□□□□□ -0.33
CSNK1E-213ENST00000495232 FILIP1Q7Z7B0 1213 aa13.01□□□□□ -0.33
CSNK1E-213ENST00000495232 PALB2Q86YC2 1186 aa13.01□□□□□ -0.33
CSNK1E-213ENST00000495232 THEM5Q8N1Q8 247 aa13.01□□□□□ -0.33
CSNK1E-213ENST00000495232 CASP10Q92851 521 aa13.01□□□□□ -0.33
CSNK1E-213ENST00000495232 FAM84AQ96KN4 292 aa13.01□□□□□ -0.33
CSNK1E-213ENST00000495232 OXCT2Q9BYC2 517 aaPredicted RBP13.01□□□□□ -0.33
CSNK1E-213ENST00000495232 UBE2ZQ9H832 354 aaPredicted RBP13.01□□□□□ -0.33
CSNK1E-213ENST00000495232 MMRN2Q9H8L6 949 aa13.01□□□□□ -0.33
CSNK1E-213ENST00000495232 METTL14Q9HCE5 456 aaKnown RBP13.01□□□□□ -0.33
CSNK1E-213ENST00000495232 THEGQ9P2T0 379 aa13.01□□□□□ -0.33
CSNK1E-213ENST00000495232 TIMM13Q9Y5L4 95 aaPredicted RBP13.01□□□□□ -0.33
CSNK1E-213ENST00000495232 SNX9Q9Y5X1 595 aa13.01□□□□□ -0.33
CSNK1E-213ENST00000495232 HCFC2Q9Y5Z7 792 aa13.01□□□□□ -0.33
CSNK1E-213ENST00000495232 VWA8A3KMH1 1905 aa13□□□□□ -0.33
CSNK1E-213ENST00000495232 SPTLC1O15269 473 aa13□□□□□ -0.33
CSNK1E-213ENST00000495232 LINC01565O15544 149 aa13□□□□□ -0.33
CSNK1E-213ENST00000495232 TRIM49P0CI25 452 aa13□□□□□ -0.33
CSNK1E-213ENST00000495232 TRIM49CP0CI26 452 aa13□□□□□ -0.33
CSNK1E-213ENST00000495232 RPL17P18621 184 aaKnown RBP13□□□□□ -0.33
CSNK1E-213ENST00000495232 TYMPP19971 482 aa13□□□□□ -0.33
CSNK1E-213ENST00000495232 KCNA5P22460 613 aa13□□□□□ -0.33
CSNK1E-213ENST00000495232 ATICP31939 592 aa13□□□□□ -0.33
CSNK1E-213ENST00000495232 ARPP19P56211 112 aa13□□□□□ -0.33
CSNK1E-213ENST00000495232 TNNC1P63316 161 aa13□□□□□ -0.33
CSNK1E-213ENST00000495232 NCOA4Q13772 614 aa13□□□□□ -0.33
CSNK1E-213ENST00000495232 CTC1Q2NKJ3 1217 aa13□□□□□ -0.33
CSNK1E-213ENST00000495232 KLHL40Q2TBA0 621 aa13□□□□□ -0.33
CSNK1E-213ENST00000495232 DPCR1Q3MIW9 517 aa13□□□□□ -0.33
CSNK1E-213ENST00000495232 CT47A1Q5JQC4 288 aaPredicted RBP13□□□□□ -0.33
CSNK1E-213ENST00000495232 TDRD10Q5VZ19 366 aaKnown RBP13□□□□□ -0.33
CSNK1E-213ENST00000495232 OVOS1Q6IE37 1185 aa13□□□□□ -0.33
CSNK1E-213ENST00000495232 RBM43Q6ZSC3 357 aaKnown RBP13□□□□□ -0.33
CSNK1E-213ENST00000495232 FRMD5Q7Z6J6 570 aa13□□□□□ -0.33
CSNK1E-213ENST00000495232 CREBRFQ8IUR6 639 aa13□□□□□ -0.33
CSNK1E-213ENST00000495232 ZC3H3Q8IXZ2 948 aaKnown RBP13□□□□□ -0.33
CSNK1E-213ENST00000495232 CCDC150Q8NCX0 1101 aa13□□□□□ -0.33
CSNK1E-213ENST00000495232 PLEKHO2Q8TD55 490 aa13□□□□□ -0.33
CSNK1E-213ENST00000495232 ZNF516Q92618 1163 aa13□□□□□ -0.33
CSNK1E-213ENST00000495232 MMS19Q96T76 1030 aa13□□□□□ -0.33
CSNK1E-213ENST00000495232 DUSP9Q99956 384 aaKnown RBP13□□□□□ -0.33
CSNK1E-213ENST00000495232 SRRTQ9BXP5 876 aaKnown RBP13□□□□□ -0.33
CSNK1E-213ENST00000495232 IMPG2Q9BZV3 1241 aa13□□□□□ -0.33
CSNK1E-213ENST00000495232 ANO10Q9NW15 660 aa13□□□□□ -0.33
CSNK1E-213ENST00000495232 MTRRQ9UBK8 725 aa13□□□□□ -0.33
CSNK1E-213ENST00000495232 SIX4Q9UIU6 781 aa13□□□□□ -0.33
CSNK1E-213ENST00000495232 BACE2Q9Y5Z0 518 aa13□□□□□ -0.33
CSNK1E-213ENST00000495232 CDY1Q9Y6F8 540 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms