RNA–Protein interactions for RNA: ENST00000494891.5

NEPRO-222, Transcript of nucleolus and neural progenitor protein, human

TSL 4

Gene NEPRO, Length 547 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEPRO-222	ENST00000494891	TDG	Q13569	410 aa		11.14	□□□□□ -0.63
NEPRO-222	ENST00000494891	MYBPC2	Q14324	1141 aa		11.14	□□□□□ -0.63
NEPRO-222	ENST00000494891	C9orf57	Q5W0N0	161 aa		11.14	□□□□□ -0.63
NEPRO-222	ENST00000494891	UNC13D	Q70J99	1090 aa		11.14	□□□□□ -0.63
NEPRO-222	ENST00000494891	FBXL6	Q8N531	539 aa		11.14	□□□□□ -0.63
NEPRO-222	ENST00000494891	SLC7A14	Q8TBB6	771 aa		11.14	□□□□□ -0.63
NEPRO-222	ENST00000494891	DHX58	Q96C10	678 aa		11.14	□□□□□ -0.63
NEPRO-222	ENST00000494891	PRRX2	Q99811	253 aa		11.14	□□□□□ -0.63
NEPRO-222	ENST00000494891	FGFBP2	Q9BYJ0	223 aa		11.14	□□□□□ -0.63
NEPRO-222	ENST00000494891	KCNK12	Q9HB15	430 aa		11.14	□□□□□ -0.63
NEPRO-222	ENST00000494891	PIDD1	Q9HB75	910 aa		11.14	□□□□□ -0.63
NEPRO-222	ENST00000494891	USP25	Q9UHP3	1055 aa		11.14	□□□□□ -0.63
NEPRO-222	ENST00000494891	DUSP12	Q9UNI6	340 aa		11.14	□□□□□ -0.63
NEPRO-222	ENST00000494891	HPSE	Q9Y251	543 aa		11.14	□□□□□ -0.63
NEPRO-222	ENST00000494891	ATP6V1D	Q9Y5K8	247 aa		11.14	□□□□□ -0.63
NEPRO-222	ENST00000494891	SCN1A	P35498	2009 aa		11.13	□□□□□ -0.63
NEPRO-222	ENST00000494891	EXTL3	O43909	919 aa		11.13	□□□□□ -0.63
NEPRO-222	ENST00000494891	SLFN14	P0C7P3	912 aa		11.13	□□□□□ -0.63
NEPRO-222	ENST00000494891	ODC1	P11926	461 aa		11.13	□□□□□ -0.63
NEPRO-222	ENST00000494891	SP100	P23497	879 aa	Predicted RBP	11.13	□□□□□ -0.63
NEPRO-222	ENST00000494891	HOXD13	P35453	343 aa		11.13	□□□□□ -0.63
NEPRO-222	ENST00000494891	PNPLA4	P41247	253 aa		11.13	□□□□□ -0.63
NEPRO-222	ENST00000494891	KRT85	P78386	507 aa		11.13	□□□□□ -0.63
NEPRO-222	ENST00000494891	SPAG1	Q07617	926 aa		11.13	□□□□□ -0.63
NEPRO-222	ENST00000494891	GPR17	Q13304	367 aa		11.13	□□□□□ -0.63
NEPRO-222	ENST00000494891	BMT2	Q1RMZ1	405 aa		11.13	□□□□□ -0.63
NEPRO-222	ENST00000494891	CTXN3	Q4LDR2	81 aa		11.13	□□□□□ -0.63
NEPRO-222	ENST00000494891	EFCAB13	Q8IY85	973 aa		11.13	□□□□□ -0.63
NEPRO-222	ENST00000494891	CXorf38	Q8TB03	319 aa		11.13	□□□□□ -0.63
NEPRO-222	ENST00000494891	PBXIP1	Q96AQ6	731 aa		11.13	□□□□□ -0.63
NEPRO-222	ENST00000494891	BORCS6	Q96GS4	357 aa		11.13	□□□□□ -0.63
NEPRO-222	ENST00000494891	MYADM	Q96S97	322 aa		11.13	□□□□□ -0.63
NEPRO-222	ENST00000494891	IKZF4	Q9H2S9	585 aa		11.13	□□□□□ -0.63
NEPRO-222	ENST00000494891	KIAA1586	Q9HCI6	787 aa		11.13	□□□□□ -0.63
NEPRO-222	ENST00000494891	DPP3	Q9NY33	737 aa		11.13	□□□□□ -0.63
NEPRO-222	ENST00000494891	TBC1D7	Q9P0N9	293 aa		11.13	□□□□□ -0.63
NEPRO-222	ENST00000494891	CGN	Q9P2M7	1197 aa	Known RBP	11.13	□□□□□ -0.63
NEPRO-222	ENST00000494891	DSE	Q9UL01	958 aa		11.13	□□□□□ -0.63
NEPRO-222	ENST00000494891	CDH7	Q9ULB5	785 aa		11.13	□□□□□ -0.63
NEPRO-222	ENST00000494891	TSC2	P49815	1807 aa		11.12	□□□□□ -0.63
NEPRO-222	ENST00000494891	SPTLC1	O15269	473 aa		11.12	□□□□□ -0.63
NEPRO-222	ENST00000494891	ASGR2	P07307	311 aa		11.12	□□□□□ -0.63
NEPRO-222	ENST00000494891	FSHR	P23945	695 aa		11.12	□□□□□ -0.63
NEPRO-222	ENST00000494891	ELF1	P32519	619 aa		11.12	□□□□□ -0.63
NEPRO-222	ENST00000494891	TAF6	P49848	677 aa		11.12	□□□□□ -0.63
NEPRO-222	ENST00000494891	EPHA5	P54756	1037 aa		11.12	□□□□□ -0.63
NEPRO-222	ENST00000494891	ASIC1	P78348	528 aa		11.12	□□□□□ -0.63
NEPRO-222	ENST00000494891	SMARCB1	Q12824	385 aa		11.12	□□□□□ -0.63
NEPRO-222	ENST00000494891	HTR4	Q13639	388 aa		11.12	□□□□□ -0.63
NEPRO-222	ENST00000494891	SURF1	Q15526	300 aa		11.12	□□□□□ -0.63
NEPRO-222	ENST00000494891	FAM26F	Q5R3K3	315 aa		11.12	□□□□□ -0.63
NEPRO-222	ENST00000494891	FOXD4L5	Q5VV16	416 aa	Predicted RBP	11.12	□□□□□ -0.63
NEPRO-222	ENST00000494891	OVOS1	Q6IE37	1185 aa		11.12	□□□□□ -0.63
NEPRO-222	ENST00000494891	GRASP	Q7Z6J2	395 aa	Predicted RBP	11.12	□□□□□ -0.63
NEPRO-222	ENST00000494891	C12orf56	Q8IXR9	622 aa		11.12	□□□□□ -0.63
NEPRO-222	ENST00000494891	SYCP3	Q8IZU3	236 aa		11.12	□□□□□ -0.63
NEPRO-222	ENST00000494891	GPD1L	Q8N335	351 aa		11.12	□□□□□ -0.63
NEPRO-222	ENST00000494891	LRRC52	Q8N7C0	313 aa		11.12	□□□□□ -0.63
NEPRO-222	ENST00000494891	LEMD2	Q8NC56	503 aa		11.12	□□□□□ -0.63
NEPRO-222	ENST00000494891	SPATA18	Q8TC71	538 aa		11.12	□□□□□ -0.63
NEPRO-222	ENST00000494891	LEO1	Q8WVC0	666 aa	Predicted RBP	11.12	□□□□□ -0.63
NEPRO-222	ENST00000494891	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	11.12	□□□□□ -0.63
NEPRO-222	ENST00000494891	SENP8	Q96LD8	212 aa		11.12	□□□□□ -0.63
NEPRO-222	ENST00000494891	CBWD1	Q9BRT8	395 aa		11.12	□□□□□ -0.63
NEPRO-222	ENST00000494891	FAM213A	Q9BRX8	229 aa		11.12	□□□□□ -0.63
NEPRO-222	ENST00000494891	SCAND2P	Q9GZW5	306 aa	Predicted RBP	11.12	□□□□□ -0.63
NEPRO-222	ENST00000494891	GDE1	Q9NZC3	331 aa		11.12	□□□□□ -0.63
NEPRO-222	ENST00000494891	DNMT3B	Q9UBC3	853 aa	Known RBP	11.12	□□□□□ -0.63
NEPRO-222	ENST00000494891	WNT16	Q9UBV4	365 aa		11.12	□□□□□ -0.63
NEPRO-222	ENST00000494891	INSL5	Q9Y5Q6	135 aa		11.12	□□□□□ -0.63
NEPRO-222	ENST00000494891	KMT2E	Q8IZD2	1858 aa		11.12	□□□□□ -0.63
NEPRO-222	ENST00000494891	TCHH	Q07283	1943 aa		11.11	□□□□□ -0.63
NEPRO-222	ENST00000494891		A0A1W2PQ27	194 aa		11.11	□□□□□ -0.63
NEPRO-222	ENST00000494891		A0A1W2PQ64	194 aa		11.11	□□□□□ -0.63
NEPRO-222	ENST00000494891		A0A1W2PQD8	194 aa		11.11	□□□□□ -0.63
NEPRO-222	ENST00000494891	PPEF2	O14830	753 aa		11.11	□□□□□ -0.63
NEPRO-222	ENST00000494891	CCL16	O15467	120 aa		11.11	□□□□□ -0.63
NEPRO-222	ENST00000494891	TGFB1I1	O43294	461 aa		11.11	□□□□□ -0.63
NEPRO-222	ENST00000494891	ACTN4	O43707	911 aa	Known RBP	11.11	□□□□□ -0.63
NEPRO-222	ENST00000494891	PRPF6	O94906	941 aa	Known RBP	11.11	□□□□□ -0.63
NEPRO-222	ENST00000494891	SEC24A	O95486	1093 aa		11.11	□□□□□ -0.63
NEPRO-222	ENST00000494891	PTPN2	P17706	415 aa		11.11	□□□□□ -0.63
NEPRO-222	ENST00000494891	GBP2	P32456	591 aa	Predicted RBP	11.11	□□□□□ -0.63
NEPRO-222	ENST00000494891	PLA2G5	P39877	138 aa		11.11	□□□□□ -0.63
NEPRO-222	ENST00000494891	GUCY2F	P51841	1108 aa		11.11	□□□□□ -0.63
NEPRO-222	ENST00000494891	PSMD2	Q13200	908 aa		11.11	□□□□□ -0.63
NEPRO-222	ENST00000494891	PABPC1L	Q4VXU2	614 aa	Known RBP	11.11	□□□□□ -0.63
NEPRO-222	ENST00000494891	ARMCX5	Q6P1M9	558 aa		11.11	□□□□□ -0.63
NEPRO-222	ENST00000494891	DSTYK	Q6XUX3	929 aa		11.11	□□□□□ -0.63
NEPRO-222	ENST00000494891	MTSS1L	Q765P7	747 aa		11.11	□□□□□ -0.63
NEPRO-222	ENST00000494891	USP37	Q86T82	979 aa		11.11	□□□□□ -0.63
NEPRO-222	ENST00000494891	SLC44A3	Q8N4M1	653 aa		11.11	□□□□□ -0.63
NEPRO-222	ENST00000494891	GLIS3	Q8NEA6	775 aa		11.11	□□□□□ -0.63
NEPRO-222	ENST00000494891	CACTIN	Q8WUQ7	758 aa	Known RBP	11.11	□□□□□ -0.63
NEPRO-222	ENST00000494891	SCFD1	Q8WVM8	642 aa		11.11	□□□□□ -0.63
NEPRO-222	ENST00000494891	FGF13	Q92913	245 aa		11.11	□□□□□ -0.63
NEPRO-222	ENST00000494891	FAM212A	Q96EL1	285 aa		11.11	□□□□□ -0.63
NEPRO-222	ENST00000494891	SPATA32	Q96LK8	384 aa		11.11	□□□□□ -0.63
NEPRO-222	ENST00000494891	ZNF560	Q96MR9	790 aa		11.11	□□□□□ -0.63
NEPRO-222	ENST00000494891	SLC2A4RG	Q9NR83	387 aa		11.11	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms