RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 PLXNA3P51805 1871 aa19.08■□□□□ 0.65
HDAC4-211ENST00000494800 FAM237AA0A1B0GTK4 181 aa19.08■□□□□ 0.64
HDAC4-211ENST00000494800 GOLGA8IPA6NC78 632 aa19.08■□□□□ 0.64
HDAC4-211ENST00000494800 ZNF233A6NK53 670 aa19.08■□□□□ 0.64
HDAC4-211ENST00000494800 GOLGA8JA6NMD2 632 aa19.08■□□□□ 0.64
HDAC4-211ENST00000494800 PIRO00625 290 aa19.08■□□□□ 0.64
HDAC4-211ENST00000494800 PRRG1O14668 218 aa19.08■□□□□ 0.64
HDAC4-211ENST00000494800 CPB1P15086 417 aa19.08■□□□□ 0.64
HDAC4-211ENST00000494800 PNPLA4P41247 253 aa19.08■□□□□ 0.64
HDAC4-211ENST00000494800 TAF6P49848 677 aa19.08■□□□□ 0.64
HDAC4-211ENST00000494800 NDUFA8P51970 172 aa19.08■□□□□ 0.64
HDAC4-211ENST00000494800 TFAMQ00059 246 aaKnown RBP19.08■□□□□ 0.64
HDAC4-211ENST00000494800 EHHADHQ08426 723 aa19.08■□□□□ 0.64
HDAC4-211ENST00000494800 MRPL58Q14197 206 aaKnown RBP19.08■□□□□ 0.64
HDAC4-211ENST00000494800 PTPN21Q16825 1174 aa19.08■□□□□ 0.64
HDAC4-211ENST00000494800 TPGS2Q68CL5 300 aa19.08■□□□□ 0.64
HDAC4-211ENST00000494800 RSPO2Q6UXX9 243 aaPredicted RBP19.08■□□□□ 0.64
HDAC4-211ENST00000494800 GLIS3Q8NEA6 775 aa19.08■□□□□ 0.64
HDAC4-211ENST00000494800 GOLGA5Q8TBA6 731 aa19.08■□□□□ 0.64
HDAC4-211ENST00000494800 ZNF707Q96C28 371 aaPredicted RBP19.08■□□□□ 0.64
HDAC4-211ENST00000494800 SLC39A2Q9NP94 309 aa19.08■□□□□ 0.64
HDAC4-211ENST00000494800 HSPBP1Q9NZL4 362 aa19.08■□□□□ 0.64
HDAC4-211ENST00000494800 DSEQ9UL01 958 aa19.08■□□□□ 0.64
HDAC4-211ENST00000494800 MAFFQ9ULX9 164 aa19.08■□□□□ 0.64
HDAC4-211ENST00000494800 POLIQ9UNA4 740 aa19.08■□□□□ 0.64
HDAC4-211ENST00000494800 PDCD11Q14690 1871 aaKnown RBP19.07■□□□□ 0.64
HDAC4-211ENST00000494800 ANO9A1A5B4 782 aa19.07■□□□□ 0.64
HDAC4-211ENST00000494800 OAZ2O95190 189 aa19.07■□□□□ 0.64
HDAC4-211ENST00000494800 POU2F2P09086 479 aa19.07■□□□□ 0.64
HDAC4-211ENST00000494800 TYMPP19971 482 aa19.07■□□□□ 0.64
HDAC4-211ENST00000494800 GBP2P32456 591 aaPredicted RBP19.07■□□□□ 0.64
HDAC4-211ENST00000494800 SV2CQ496J9 727 aa19.07■□□□□ 0.64
HDAC4-211ENST00000494800 OVOS1Q6IE37 1185 aa19.07■□□□□ 0.64
HDAC4-211ENST00000494800 METTL23Q86XA0 190 aa19.07■□□□□ 0.64
HDAC4-211ENST00000494800 NELFCDQ8IXH7 590 aa19.07■□□□□ 0.64
HDAC4-211ENST00000494800 SCFD1Q8WVM8 642 aa19.07■□□□□ 0.64
HDAC4-211ENST00000494800 EDAQ92838 391 aa19.07■□□□□ 0.64
HDAC4-211ENST00000494800 AGPAT3Q9NRZ7 376 aa19.07■□□□□ 0.64
HDAC4-211ENST00000494800 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.07■□□□□ 0.64
HDAC4-211ENST00000494800 WDR27A2RRH5 827 aa19.06■□□□□ 0.64
HDAC4-211ENST00000494800 OR6C75A6NL08 312 aa19.06■□□□□ 0.64
HDAC4-211ENST00000494800 PRR33A8MZF0 331 aa19.06■□□□□ 0.64
HDAC4-211ENST00000494800 TBC1D4O60343 1298 aa19.06■□□□□ 0.64
HDAC4-211ENST00000494800 ABLIM3O94929 683 aa19.06■□□□□ 0.64
HDAC4-211ENST00000494800 KIF20AO95235 890 aa19.06■□□□□ 0.64
HDAC4-211ENST00000494800 LRG1P02750 347 aa19.06■□□□□ 0.64
HDAC4-211ENST00000494800 TMEM191BP0C7N4 346 aa19.06■□□□□ 0.64
HDAC4-211ENST00000494800 ATF2P15336 505 aa19.06■□□□□ 0.64
HDAC4-211ENST00000494800 MTMR3Q13615 1198 aa19.06■□□□□ 0.64
HDAC4-211ENST00000494800 KNOP1Q1ED39 458 aaKnown RBP19.06■□□□□ 0.64
HDAC4-211ENST00000494800 BMT2Q1RMZ1 405 aa19.06■□□□□ 0.64
HDAC4-211ENST00000494800 EFCAB13Q8IY85 973 aa19.06■□□□□ 0.64
HDAC4-211ENST00000494800 ANKRD36BP1Q96IX9 119 aa19.06■□□□□ 0.64
HDAC4-211ENST00000494800 SENP8Q96LD8 212 aa19.06■□□□□ 0.64
HDAC4-211ENST00000494800 CYP4F11Q9HBI6 524 aa19.06■□□□□ 0.64
HDAC4-211ENST00000494800 GDPD2Q9HCC8 539 aa19.06■□□□□ 0.64
HDAC4-211ENST00000494800 ITGA11Q9UKX5 1188 aa19.06■□□□□ 0.64
HDAC4-211ENST00000494800 SORCS3Q9UPU3 1222 aa19.06■□□□□ 0.64
HDAC4-211ENST00000494800 TIMM13Q9Y5L4 95 aaPredicted RBP19.06■□□□□ 0.64
HDAC4-211ENST00000494800 VWA8A3KMH1 1905 aa19.06■□□□□ 0.64
HDAC4-211ENST00000494800 FAM86C2PA6NEL3 165 aa19.05■□□□□ 0.64
HDAC4-211ENST00000494800 PPEF2O14830 753 aa19.05■□□□□ 0.64
HDAC4-211ENST00000494800 CCL16O15467 120 aa19.05■□□□□ 0.64
HDAC4-211ENST00000494800 RPN1P04843 607 aaKnown RBP19.05■□□□□ 0.64
HDAC4-211ENST00000494800 HOXD13P35453 343 aa19.05■□□□□ 0.64
HDAC4-211ENST00000494800 ZXDAP98168 799 aa19.05■□□□□ 0.64
HDAC4-211ENST00000494800 KMT5BQ4FZB7 885 aa19.05■□□□□ 0.64
HDAC4-211ENST00000494800 GRASPQ7Z6J2 395 aaPredicted RBP19.05■□□□□ 0.64
HDAC4-211ENST00000494800 TCEAL8Q8IYN2 117 aa19.05■□□□□ 0.64
HDAC4-211ENST00000494800 UBALD2Q8IYN6 164 aa19.05■□□□□ 0.64
HDAC4-211ENST00000494800 ELMOD1Q8N336 334 aa19.05■□□□□ 0.64
HDAC4-211ENST00000494800 TMEM130Q8N3G9 435 aa19.05■□□□□ 0.64
HDAC4-211ENST00000494800 XXYLT1Q8NBI6 393 aa19.05■□□□□ 0.64
HDAC4-211ENST00000494800 LIMD1Q9UGP4 676 aa19.05■□□□□ 0.64
HDAC4-211ENST00000494800 AFF4Q9UHB7 1163 aaKnown RBP19.05■□□□□ 0.64
HDAC4-211ENST00000494800 CYB561D2O14569 222 aa19.04■□□□□ 0.64
HDAC4-211ENST00000494800 TGFB1I1O43294 461 aa19.04■□□□□ 0.64
HDAC4-211ENST00000494800 PRPF40AO75400 957 aaKnown RBP19.04■□□□□ 0.64
HDAC4-211ENST00000494800 ZNF202O95125 648 aa19.04■□□□□ 0.64
HDAC4-211ENST00000494800 TNNC2P02585 160 aa19.04■□□□□ 0.64
HDAC4-211ENST00000494800 ITGB3P05106 788 aa19.04■□□□□ 0.64
HDAC4-211ENST00000494800 FSHRP23945 695 aa19.04■□□□□ 0.64
HDAC4-211ENST00000494800 CYP2J2P51589 502 aa19.04■□□□□ 0.64
HDAC4-211ENST00000494800 MYBPC2Q14324 1141 aa19.04■□□□□ 0.64
HDAC4-211ENST00000494800 SNRNP35Q16560 246 aaKnown RBP19.04■□□□□ 0.64
HDAC4-211ENST00000494800 KRBA2Q6ZNG9 492 aa19.04■□□□□ 0.64
HDAC4-211ENST00000494800 GET4Q7L5D6 327 aaPredicted RBP19.04■□□□□ 0.64
HDAC4-211ENST00000494800 THEM5Q8N1Q8 247 aa19.04■□□□□ 0.64
HDAC4-211ENST00000494800 ZSWIM2Q8NEG5 633 aa19.04■□□□□ 0.64
HDAC4-211ENST00000494800 FEZF2Q8TBJ5 459 aa19.04■□□□□ 0.64
HDAC4-211ENST00000494800 FNBP1Q96RU3 617 aa19.04■□□□□ 0.64
HDAC4-211ENST00000494800 LRFN3Q9BTN0 628 aa19.04■□□□□ 0.64
HDAC4-211ENST00000494800 PDE11AQ9HCR9 933 aa19.04■□□□□ 0.64
HDAC4-211ENST00000494800 AGAP1Q9UPQ3 857 aa19.04■□□□□ 0.64
HDAC4-211ENST00000494800 ZFP37Q9Y6Q3 630 aaPredicted RBP19.04■□□□□ 0.64
HDAC4-211ENST00000494800 KPNA7A9QM74 516 aa19.03■□□□□ 0.64
HDAC4-211ENST00000494800 CLIC2O15247 247 aa19.03■□□□□ 0.64
HDAC4-211ENST00000494800 SPTLC1O15269 473 aa19.03■□□□□ 0.64
HDAC4-211ENST00000494800 KLRC4O43908 158 aa19.03■□□□□ 0.64
HDAC4-211ENST00000494800 CYP11A1P05108 521 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms