RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 CASP8AP2Q9UKL3 1982 aa11.34□□□□□ -0.59
PRPF4B-209ENST00000494674 HTTP42858 3142 aa11.34□□□□□ -0.59
PRPF4B-209ENST00000494674 TMEM110-MUSTN1A8MSY1 372 aa11.34□□□□□ -0.59
PRPF4B-209ENST00000494674 MYBL1P10243 752 aa11.34□□□□□ -0.59
PRPF4B-209ENST00000494674 FGFR4P22455 802 aa11.34□□□□□ -0.59
PRPF4B-209ENST00000494674 HOXA11P31270 313 aaPredicted RBP11.34□□□□□ -0.59
PRPF4B-209ENST00000494674 SSTR3P32745 418 aaPredicted RBP11.34□□□□□ -0.59
PRPF4B-209ENST00000494674 CTNNA1P35221 906 aaKnown RBP11.34□□□□□ -0.59
PRPF4B-209ENST00000494674 TNNC1P63316 161 aa11.34□□□□□ -0.59
PRPF4B-209ENST00000494674 TRPC3Q13507 836 aa11.34□□□□□ -0.59
PRPF4B-209ENST00000494674 MFSD10Q14728 455 aa11.34□□□□□ -0.59
PRPF4B-209ENST00000494674 KIZQ2M2Z5 673 aa11.34□□□□□ -0.59
PRPF4B-209ENST00000494674 C2CD6Q53TS8 623 aa11.34□□□□□ -0.59
PRPF4B-209ENST00000494674 PASD1Q8IV76 773 aa11.34□□□□□ -0.59
PRPF4B-209ENST00000494674 ZNF606Q8WXB4 792 aa11.34□□□□□ -0.59
PRPF4B-209ENST00000494674 SOCS4Q8WXH5 440 aa11.34□□□□□ -0.59
PRPF4B-209ENST00000494674 ZIC5Q96T25 663 aa11.34□□□□□ -0.59
PRPF4B-209ENST00000494674 SDCBP2Q9H190 292 aa11.34□□□□□ -0.59
PRPF4B-209ENST00000494674 ASB7Q9H672 318 aa11.34□□□□□ -0.59
PRPF4B-209ENST00000494674 CDHR5Q9HBB8 845 aa11.34□□□□□ -0.59
PRPF4B-209ENST00000494674 TLL2Q9Y6L7 1015 aa11.34□□□□□ -0.59
PRPF4B-209ENST00000494674 SMIM35A0A1B0GVV1 85 aa11.33□□□□□ -0.6
PRPF4B-209ENST00000494674 CCDC188H7C350 402 aa11.33□□□□□ -0.6
PRPF4B-209ENST00000494674 THAP12O43422 761 aa11.33□□□□□ -0.6
PRPF4B-209ENST00000494674 HEXIM1O94992 359 aaKnown RBP11.33□□□□□ -0.6
PRPF4B-209ENST00000494674 FGGP02679 453 aa11.33□□□□□ -0.6
PRPF4B-209ENST00000494674 WEE2P0C1S8 567 aa11.33□□□□□ -0.6
PRPF4B-209ENST00000494674 CD58P19256 250 aa11.33□□□□□ -0.6
PRPF4B-209ENST00000494674 CTNNA2P26232 953 aa11.33□□□□□ -0.6
PRPF4B-209ENST00000494674 HOXC8P31273 242 aa11.33□□□□□ -0.6
PRPF4B-209ENST00000494674 GRM5P41594 1212 aa11.33□□□□□ -0.6
PRPF4B-209ENST00000494674 NSFP46459 744 aaKnown RBP11.33□□□□□ -0.6
PRPF4B-209ENST00000494674 PSEN2P49810 448 aa11.33□□□□□ -0.6
PRPF4B-209ENST00000494674 INHBEP58166 350 aa11.33□□□□□ -0.6
PRPF4B-209ENST00000494674 TMEM62Q0P6H9 643 aa11.33□□□□□ -0.6
PRPF4B-209ENST00000494674 ZNF211Q13398 564 aaPredicted RBP11.33□□□□□ -0.6
PRPF4B-209ENST00000494674 KYAT1Q16773 422 aa11.33□□□□□ -0.6
PRPF4B-209ENST00000494674 AADACL2Q6P093 401 aa11.33□□□□□ -0.6
PRPF4B-209ENST00000494674 SCARA5Q6ZMJ2 495 aa11.33□□□□□ -0.6
PRPF4B-209ENST00000494674 KLHL7Q8IXQ5 586 aa11.33□□□□□ -0.6
PRPF4B-209ENST00000494674 TRPV1Q8NER1 839 aa11.33□□□□□ -0.6
PRPF4B-209ENST00000494674 UBE2Q2Q8WVN8 375 aa11.33□□□□□ -0.6
PRPF4B-209ENST00000494674 TFAP2BQ92481 460 aa11.33□□□□□ -0.6
PRPF4B-209ENST00000494674 TRIM11Q96F44 468 aa11.33□□□□□ -0.6
PRPF4B-209ENST00000494674 VCPIP1Q96JH7 1222 aa11.33□□□□□ -0.6
PRPF4B-209ENST00000494674 FAM49AQ9H0Q0 323 aaPredicted RBP11.33□□□□□ -0.6
PRPF4B-209ENST00000494674 DDX47Q9H0S4 455 aaKnown RBP11.33□□□□□ -0.6
PRPF4B-209ENST00000494674 WNT8AQ9H1J5 351 aa11.33□□□□□ -0.6
PRPF4B-209ENST00000494674 CXCL16Q9H2A7 254 aa11.33□□□□□ -0.6
PRPF4B-209ENST00000494674 VRTNQ9H8Y1 702 aa11.33□□□□□ -0.6
PRPF4B-209ENST00000494674 Q9Y3F1 56 aa11.33□□□□□ -0.6
PRPF4B-209ENST00000494674 H3BQF6 201 aa11.32□□□□□ -0.6
PRPF4B-209ENST00000494674 KRIT1O00522 736 aa11.32□□□□□ -0.6
PRPF4B-209ENST00000494674 ERLIN2O94905 339 aa11.32□□□□□ -0.6
PRPF4B-209ENST00000494674 ITGB3P05106 788 aa11.32□□□□□ -0.6
PRPF4B-209ENST00000494674 BRD2P25440 801 aaKnown RBP11.32□□□□□ -0.6
PRPF4B-209ENST00000494674 CDH5P33151 784 aaPredicted RBP11.32□□□□□ -0.6
PRPF4B-209ENST00000494674 RAP1GAPP47736 663 aa11.32□□□□□ -0.6
PRPF4B-209ENST00000494674 BEX3Q00994 111 aa11.32□□□□□ -0.6
PRPF4B-209ENST00000494674 TRADDQ15628 312 aa11.32□□□□□ -0.6
PRPF4B-209ENST00000494674 MAP9Q49MG5 647 aa11.32□□□□□ -0.6
PRPF4B-209ENST00000494674 PLEKHA7Q6IQ23 1121 aa11.32□□□□□ -0.6
PRPF4B-209ENST00000494674 MMS22LQ6ZRQ5 1243 aa11.32□□□□□ -0.6
PRPF4B-209ENST00000494674 ZDHHC14Q8IZN3 488 aa11.32□□□□□ -0.6
PRPF4B-209ENST00000494674 CASKIN2Q8WXE0 1202 aa11.32□□□□□ -0.6
PRPF4B-209ENST00000494674 FAXDC2Q96IV6 333 aa11.32□□□□□ -0.6
PRPF4B-209ENST00000494674 SCLT1Q96NL6 688 aa11.32□□□□□ -0.6
PRPF4B-209ENST00000494674 C11orf70Q9BRQ4 267 aa11.32□□□□□ -0.6
PRPF4B-209ENST00000494674 ZFYVE28Q9HCC9 887 aa11.32□□□□□ -0.6
PRPF4B-209ENST00000494674 ERVK-5Q9HDB9 667 aa11.32□□□□□ -0.6
PRPF4B-209ENST00000494674 ANAPC7Q9UJX3 599 aa11.32□□□□□ -0.6
PRPF4B-209ENST00000494674 C2CD2Q9Y426 696 aa11.32□□□□□ -0.6
PRPF4B-209ENST00000494674 PCDHA3Q9Y5H8 950 aa11.32□□□□□ -0.6
PRPF4B-209ENST00000494674 TCRBV5S1A1TA0A578 114 aa11.32□□□□□ -0.6
PRPF4B-209ENST00000494674 ESYT3A0FGR9 886 aa11.32□□□□□ -0.6
PRPF4B-209ENST00000494674 TNPO2O14787 897 aaKnown RBP11.32□□□□□ -0.6
PRPF4B-209ENST00000494674 SART1O43290 800 aaKnown RBP11.32□□□□□ -0.6
PRPF4B-209ENST00000494674 LSM8O95777 96 aaKnown RBP11.32□□□□□ -0.6
PRPF4B-209ENST00000494674 CYP2C9P11712 490 aa11.32□□□□□ -0.6
PRPF4B-209ENST00000494674 DARSP14868 501 aaKnown RBP11.32□□□□□ -0.6
PRPF4B-209ENST00000494674 MMP8P22894 467 aa11.32□□□□□ -0.6
PRPF4B-209ENST00000494674 TM4SF4P48230 202 aa11.32□□□□□ -0.6
PRPF4B-209ENST00000494674 CARSP49589 748 aaKnown RBP11.32□□□□□ -0.6
PRPF4B-209ENST00000494674 CPT1AP50416 773 aa11.32□□□□□ -0.6
PRPF4B-209ENST00000494674 GUCY2FP51841 1108 aa11.32□□□□□ -0.6
PRPF4B-209ENST00000494674 MAMLD1Q13495 774 aa11.32□□□□□ -0.6
PRPF4B-209ENST00000494674 SMC1AQ14683 1233 aaKnown RBP11.32□□□□□ -0.6
PRPF4B-209ENST00000494674 TMEM132DQ14C87 1099 aa11.32□□□□□ -0.6
PRPF4B-209ENST00000494674 DCAF4L1Q3SXM0 396 aa11.32□□□□□ -0.6
PRPF4B-209ENST00000494674 PHLDB2Q86SQ0 1253 aa11.32□□□□□ -0.6
PRPF4B-209ENST00000494674 WDTC1Q8N5D0 677 aa11.32□□□□□ -0.6
PRPF4B-209ENST00000494674 UBL4BQ8N7F7 174 aa11.32□□□□□ -0.6
PRPF4B-209ENST00000494674 WHAMMQ8TF30 809 aa11.32□□□□□ -0.6
PRPF4B-209ENST00000494674 OSMRQ99650 979 aa11.32□□□□□ -0.6
PRPF4B-209ENST00000494674 PLEKHA4Q9H4M7 779 aa11.32□□□□□ -0.6
PRPF4B-209ENST00000494674 SLITRK6Q9H5Y7 841 aa11.32□□□□□ -0.6
PRPF4B-209ENST00000494674 SMYD3Q9H7B4 428 aa11.32□□□□□ -0.6
PRPF4B-209ENST00000494674 VIPAS39Q9H9C1 493 aa11.32□□□□□ -0.6
PRPF4B-209ENST00000494674 ADAM22Q9P0K1 906 aa11.32□□□□□ -0.6
PRPF4B-209ENST00000494674 HPCAL4Q9UM19 191 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms