RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 IMPG2Q9BZV3 1241 aa11.91□□□□□ -0.5
CHMP3-209ENST00000494623 AAASQ9NRG9 546 aa11.91□□□□□ -0.5
CHMP3-209ENST00000494623 SNCAIPQ9Y6H5 919 aa11.91□□□□□ -0.5
CHMP3-209ENST00000494623 LTBP3Q9NS15 1303 aa11.91□□□□□ -0.5
CHMP3-209ENST00000494623 MAFO75444 373 aaPredicted RBP11.91□□□□□ -0.5
CHMP3-209ENST00000494623 GAS8O95995 478 aa11.91□□□□□ -0.5
CHMP3-209ENST00000494623 PAEPP09466 180 aa11.91□□□□□ -0.5
CHMP3-209ENST00000494623 MYL6P60660 151 aa11.91□□□□□ -0.5
CHMP3-209ENST00000494623 RPL7AP62424 266 aaKnown RBP11.91□□□□□ -0.5
CHMP3-209ENST00000494623 AUHQ13825 339 aaKnown RBP11.91□□□□□ -0.5
CHMP3-209ENST00000494623 NEDD9Q14511 834 aa11.91□□□□□ -0.5
CHMP3-209ENST00000494623 LONRF1Q17RB8 773 aa11.91□□□□□ -0.5
CHMP3-209ENST00000494623 ERMARDQ5T6L9 678 aa11.91□□□□□ -0.5
CHMP3-209ENST00000494623 KAZNQ674X7 775 aa11.91□□□□□ -0.5
CHMP3-209ENST00000494623 ANKS1BQ7Z6G8 1248 aa11.91□□□□□ -0.5
CHMP3-209ENST00000494623 PRUNE1Q86TP1 453 aa11.91□□□□□ -0.5
CHMP3-209ENST00000494623 PHF13Q86YI8 300 aaPredicted RBP11.91□□□□□ -0.5
CHMP3-209ENST00000494623 LRRC71Q8N4P6 559 aa11.91□□□□□ -0.5
CHMP3-209ENST00000494623 FEZF2Q8TBJ5 459 aa11.91□□□□□ -0.5
CHMP3-209ENST00000494623 SLCO2A1Q92959 643 aa11.91□□□□□ -0.5
CHMP3-209ENST00000494623 SNF8Q96H20 258 aa11.91□□□□□ -0.5
CHMP3-209ENST00000494623 SEC16BQ96JE7 1060 aa11.91□□□□□ -0.5
CHMP3-209ENST00000494623 OSBPL8Q9BZF1 889 aa11.91□□□□□ -0.5
CHMP3-209ENST00000494623 MTMR12Q9C0I1 747 aa11.91□□□□□ -0.5
CHMP3-209ENST00000494623 ANAPC5Q9UJX4 755 aa11.91□□□□□ -0.5
CHMP3-209ENST00000494623 PI4K2BG5E9Z4 385 aa11.9□□□□□ -0.5
CHMP3-209ENST00000494623 AGTP01019 485 aa11.9□□□□□ -0.5
CHMP3-209ENST00000494623 ATF2P15336 505 aa11.9□□□□□ -0.5
CHMP3-209ENST00000494623 IVDP26440 423 aa11.9□□□□□ -0.5
CHMP3-209ENST00000494623 MMP13P45452 471 aa11.9□□□□□ -0.5
CHMP3-209ENST00000494623 PTP4A2Q12974 167 aa11.9□□□□□ -0.5
CHMP3-209ENST00000494623 PLEKHA7Q6IQ23 1121 aa11.9□□□□□ -0.5
CHMP3-209ENST00000494623 TRMT10CQ7L0Y3 403 aaKnown RBP11.9□□□□□ -0.5
CHMP3-209ENST00000494623 TRIM50Q86XT4 487 aa11.9□□□□□ -0.5
CHMP3-209ENST00000494623 RIOX2Q8IUF8 465 aa11.9□□□□□ -0.5
CHMP3-209ENST00000494623 GRK7Q8WTQ7 553 aa11.9□□□□□ -0.5
CHMP3-209ENST00000494623 VCPIP1Q96JH7 1222 aa11.9□□□□□ -0.5
CHMP3-209ENST00000494623 CABS1Q96KC9 395 aa11.9□□□□□ -0.5
CHMP3-209ENST00000494623 ADAM7Q9H2U9 754 aa11.9□□□□□ -0.5
CHMP3-209ENST00000494623 PARVAQ9NVD7 372 aa11.9□□□□□ -0.5
CHMP3-209ENST00000494623 CAPN7Q9Y6W3 813 aa11.9□□□□□ -0.5
CHMP3-209ENST00000494623 SSC5DA1L4H1 1573 aa11.9□□□□□ -0.5
CHMP3-209ENST00000494623 PGK2P07205 417 aa11.9□□□□□ -0.5
CHMP3-209ENST00000494623 WEE2P0C1S8 567 aa11.9□□□□□ -0.5
CHMP3-209ENST00000494623 OSTNP61366 133 aa11.9□□□□□ -0.5
CHMP3-209ENST00000494623 PTK6Q13882 451 aa11.9□□□□□ -0.5
CHMP3-209ENST00000494623 KYNUQ16719 465 aa11.9□□□□□ -0.5
CHMP3-209ENST00000494623 GSTA5Q7RTV2 222 aa11.9□□□□□ -0.5
CHMP3-209ENST00000494623 RNF149Q8NC42 400 aa11.9□□□□□ -0.5
CHMP3-209ENST00000494623 MRPL4Q9BYD3 311 aaKnown RBP11.9□□□□□ -0.5
CHMP3-209ENST00000494623 SPATC1LQ9H0A9 340 aa11.9□□□□□ -0.5
CHMP3-209ENST00000494623 CNTN6Q9UQ52 1028 aa11.9□□□□□ -0.5
CHMP3-209ENST00000494623 SCINQ9Y6U3 715 aa11.9□□□□□ -0.5
CHMP3-209ENST00000494623 PSTPIP1O43586 416 aa11.89□□□□□ -0.51
CHMP3-209ENST00000494623 MSCO60682 206 aa11.89□□□□□ -0.51
CHMP3-209ENST00000494623 TOM1L1O75674 476 aa11.89□□□□□ -0.51
CHMP3-209ENST00000494623 KRT10P13645 584 aa11.89□□□□□ -0.51
CHMP3-209ENST00000494623 MAN1A1P33908 653 aa11.89□□□□□ -0.51
CHMP3-209ENST00000494623 TFAMQ00059 246 aaKnown RBP11.89□□□□□ -0.51
CHMP3-209ENST00000494623 C1QBPQ07021 282 aaKnown RBP11.89□□□□□ -0.51
CHMP3-209ENST00000494623 LAMTOR4Q0VGL1 99 aa11.89□□□□□ -0.51
CHMP3-209ENST00000494623 RHBDF2Q6PJF5 856 aa11.89□□□□□ -0.51
CHMP3-209ENST00000494623 ZPBP2Q6X784 338 aa11.89□□□□□ -0.51
CHMP3-209ENST00000494623 ZNF365Q70YC5 407 aa11.89□□□□□ -0.51
CHMP3-209ENST00000494623 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.89□□□□□ -0.51
CHMP3-209ENST00000494623 CROCCP2Q86T23 111 aa11.89□□□□□ -0.51
CHMP3-209ENST00000494623 CDR2LQ86X02 465 aaPredicted RBP11.89□□□□□ -0.51
CHMP3-209ENST00000494623 BRSK2Q8IWQ3 736 aa11.89□□□□□ -0.51
CHMP3-209ENST00000494623 CENPTQ96BT3 561 aa11.89□□□□□ -0.51
CHMP3-209ENST00000494623 CHMP6Q96FZ7 201 aa11.89□□□□□ -0.51
CHMP3-209ENST00000494623 TMEM109Q9BVC6 243 aa11.89□□□□□ -0.51
CHMP3-209ENST00000494623 FAM129AQ9BZQ8 928 aa11.89□□□□□ -0.51
CHMP3-209ENST00000494623 INTS9Q9NV88 658 aaKnown RBP11.89□□□□□ -0.51
CHMP3-209ENST00000494623 PPP2R3BQ9Y5P8 575 aa11.89□□□□□ -0.51
CHMP3-209ENST00000494623 ARIH2O95376 493 aa11.89□□□□□ -0.51
CHMP3-209ENST00000494623 ASS1P00966 412 aaKnown RBP11.89□□□□□ -0.51
CHMP3-209ENST00000494623 TCF4P15884 667 aa11.89□□□□□ -0.51
CHMP3-209ENST00000494623 DRD4P21917 467 aa11.89□□□□□ -0.51
CHMP3-209ENST00000494623 SLC20A2Q08357 652 aa11.89□□□□□ -0.51
CHMP3-209ENST00000494623 KLF1Q13351 362 aaPredicted RBP11.89□□□□□ -0.51
CHMP3-209ENST00000494623 TRPC3Q13507 836 aa11.89□□□□□ -0.51
CHMP3-209ENST00000494623 CCNG2Q16589 344 aa11.89□□□□□ -0.51
CHMP3-209ENST00000494623 HSDL1Q3SXM5 330 aa11.89□□□□□ -0.51
CHMP3-209ENST00000494623 IER5Q5VY09 327 aa11.89□□□□□ -0.51
CHMP3-209ENST00000494623 C6orf89Q6UWU4 347 aa11.89□□□□□ -0.51
CHMP3-209ENST00000494623 METTL7BQ6UX53 244 aa11.89□□□□□ -0.51
CHMP3-209ENST00000494623 SCARA5Q6ZMJ2 495 aa11.89□□□□□ -0.51
CHMP3-209ENST00000494623 SYDE1Q6ZW31 735 aaPredicted RBP11.89□□□□□ -0.51
CHMP3-209ENST00000494623 THNSL1Q8IYQ7 743 aa11.89□□□□□ -0.51
CHMP3-209ENST00000494623 KATNAL2Q8IYT4 538 aa11.89□□□□□ -0.51
CHMP3-209ENST00000494623 KCNN1Q92952 543 aa11.89□□□□□ -0.51
CHMP3-209ENST00000494623 ACO2Q99798 780 aaKnown RBP11.89□□□□□ -0.51
CHMP3-209ENST00000494623 PRMT1Q99873 361 aaKnown RBP11.89□□□□□ -0.51
CHMP3-209ENST00000494623 MAF1Q9H063 256 aa11.89□□□□□ -0.51
CHMP3-209ENST00000494623 CISHQ9NSE2 258 aa11.89□□□□□ -0.51
CHMP3-209ENST00000494623 IP6K2Q9UHH9 426 aa11.89□□□□□ -0.51
CHMP3-209ENST00000494623 H0YHG0 523 aa11.88□□□□□ -0.51
CHMP3-209ENST00000494623 PRKCBP05771 671 aa11.88□□□□□ -0.51
CHMP3-209ENST00000494623 GJB1P08034 283 aa11.88□□□□□ -0.51
CHMP3-209ENST00000494623 MMP8P22894 467 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms