RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 ECI2O75521 394 aa12.83□□□□□ -0.36
CSNK1E-212ENST00000494610 NDUFA8P51970 172 aa12.83□□□□□ -0.36
CSNK1E-212ENST00000494610 SATB1Q01826 763 aa12.83□□□□□ -0.36
CSNK1E-212ENST00000494610 ADCY1Q08828 1119 aa12.83□□□□□ -0.36
CSNK1E-212ENST00000494610 GAS6Q14393 721 aa12.83□□□□□ -0.36
CSNK1E-212ENST00000494610 ECM1Q16610 540 aa12.83□□□□□ -0.36
CSNK1E-212ENST00000494610 UPP1Q16831 310 aa12.83□□□□□ -0.36
CSNK1E-212ENST00000494610 FAM187BQ17R55 369 aa12.83□□□□□ -0.36
CSNK1E-212ENST00000494610 WDR44Q5JSH3 913 aa12.83□□□□□ -0.36
CSNK1E-212ENST00000494610 PRSS36Q5K4E3 855 aa12.83□□□□□ -0.36
CSNK1E-212ENST00000494610 CAVIN1Q6NZI2 390 aaKnown RBP12.83□□□□□ -0.36
CSNK1E-212ENST00000494610 FMR1NBQ8N0W7 255 aaPredicted RBP12.83□□□□□ -0.36
CSNK1E-212ENST00000494610 SNX29Q8TEQ0 813 aa12.83□□□□□ -0.36
CSNK1E-212ENST00000494610 RSPRY1Q96DX4 576 aa12.83□□□□□ -0.36
CSNK1E-212ENST00000494610 ZMAT2Q96NC0 199 aaKnown RBP12.83□□□□□ -0.36
CSNK1E-212ENST00000494610 LRRC27Q9C0I9 530 aa12.83□□□□□ -0.36
CSNK1E-212ENST00000494610 GOLPH3LQ9H4A5 285 aa12.83□□□□□ -0.36
CSNK1E-212ENST00000494610 CLSTN2Q9H4D0 955 aa12.83□□□□□ -0.36
CSNK1E-212ENST00000494610 RBM12Q9NTZ6 932 aaKnown RBP12.83□□□□□ -0.36
CSNK1E-212ENST00000494610 CNOT1A5YKK6 2376 aaKnown RBP12.83□□□□□ -0.36
CSNK1E-212ENST00000494610 SPEGQ15772 3267 aa12.82□□□□□ -0.36
CSNK1E-212ENST00000494610 ACKR2O00590 384 aa12.82□□□□□ -0.36
CSNK1E-212ENST00000494610 MOSPD3O75425 235 aa12.82□□□□□ -0.36
CSNK1E-212ENST00000494610 ZNF202O95125 648 aa12.82□□□□□ -0.36
CSNK1E-212ENST00000494610 MYL1P05976 194 aa12.82□□□□□ -0.36
CSNK1E-212ENST00000494610 STAT6P42226 847 aa12.82□□□□□ -0.36
CSNK1E-212ENST00000494610 SOX9P48436 509 aa12.82□□□□□ -0.36
CSNK1E-212ENST00000494610 CDR1P51861 262 aa12.82□□□□□ -0.36
CSNK1E-212ENST00000494610 UVSSAQ2YD98 709 aa12.82□□□□□ -0.36
CSNK1E-212ENST00000494610 PADI6Q6TGC4 694 aa12.82□□□□□ -0.36
CSNK1E-212ENST00000494610 VITQ6UXI7 678 aa12.82□□□□□ -0.36
CSNK1E-212ENST00000494610 PRR23BQ6ZRT6 265 aa12.82□□□□□ -0.36
CSNK1E-212ENST00000494610 ZBTB8OSQ8IWT0 167 aa12.82□□□□□ -0.36
CSNK1E-212ENST00000494610 ENGASEQ8NFI3 743 aa12.82□□□□□ -0.36
CSNK1E-212ENST00000494610 TTC8Q8TAM2 541 aa12.82□□□□□ -0.36
CSNK1E-212ENST00000494610 C18orf25Q96B23 403 aaPredicted RBP12.82□□□□□ -0.36
CSNK1E-212ENST00000494610 ELSPBP1Q96BH3 223 aa12.82□□□□□ -0.36
CSNK1E-212ENST00000494610 PRIMPOLQ96LW4 560 aa12.82□□□□□ -0.36
CSNK1E-212ENST00000494610 TNMDQ9H2S6 317 aa12.82□□□□□ -0.36
CSNK1E-212ENST00000494610 BRD9Q9H8M2 597 aa12.82□□□□□ -0.36
CSNK1E-212ENST00000494610 LMAN1LQ9HAT1 526 aa12.82□□□□□ -0.36
CSNK1E-212ENST00000494610 TUFT1Q9NNX1 390 aa12.82□□□□□ -0.36
CSNK1E-212ENST00000494610 ZMYM2Q9UBW7 1377 aa12.81□□□□□ -0.36
CSNK1E-212ENST00000494610 SMIM28A0A1B0GU29 152 aa12.81□□□□□ -0.36
CSNK1E-212ENST00000494610 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.81□□□□□ -0.36
CSNK1E-212ENST00000494610 PRRG1O14668 218 aa12.81□□□□□ -0.36
CSNK1E-212ENST00000494610 LRG1P02750 347 aa12.81□□□□□ -0.36
CSNK1E-212ENST00000494610 PTPN2P17706 415 aa12.81□□□□□ -0.36
CSNK1E-212ENST00000494610 KCNA4P22459 653 aa12.81□□□□□ -0.36
CSNK1E-212ENST00000494610 GDI1P31150 447 aa12.81□□□□□ -0.36
CSNK1E-212ENST00000494610 CCT6AP40227 531 aaKnown RBP12.81□□□□□ -0.36
CSNK1E-212ENST00000494610 RPS9P46781 194 aaKnown RBP12.81□□□□□ -0.36
CSNK1E-212ENST00000494610 AMPD3Q01432 767 aa12.81□□□□□ -0.36
CSNK1E-212ENST00000494610 GRIN1Q05586 938 aa12.81□□□□□ -0.36
CSNK1E-212ENST00000494610 ZRSR1Q15695 479 aaKnown RBP12.81□□□□□ -0.36
CSNK1E-212ENST00000494610 IL17AQ16552 155 aa12.81□□□□□ -0.36
CSNK1E-212ENST00000494610 MAPK6Q16659 721 aa12.81□□□□□ -0.36
CSNK1E-212ENST00000494610 HYIQ5T013 277 aa12.81□□□□□ -0.36
CSNK1E-212ENST00000494610 RRAGBQ5VZM2 374 aa12.81□□□□□ -0.36
CSNK1E-212ENST00000494610 DEPTORQ8TB45 409 aa12.81□□□□□ -0.36
CSNK1E-212ENST00000494610 EPSTI1Q96J88 318 aa12.81□□□□□ -0.36
CSNK1E-212ENST00000494610 POLR3CQ9BUI4 534 aaPredicted RBP12.81□□□□□ -0.36
CSNK1E-212ENST00000494610 CYP4F11Q9HBI6 524 aa12.81□□□□□ -0.36
CSNK1E-212ENST00000494610 GDE1Q9NZC3 331 aa12.81□□□□□ -0.36
CSNK1E-212ENST00000494610 CEP72Q9P209 647 aa12.81□□□□□ -0.36
CSNK1E-212ENST00000494610 BACE2Q9Y5Z0 518 aa12.81□□□□□ -0.36
CSNK1E-212ENST00000494610 RALGAPA1Q6GYQ0 2036 aa12.81□□□□□ -0.36
CSNK1E-212ENST00000494610 ARHGEF37A1IGU5 675 aa12.8□□□□□ -0.36
CSNK1E-212ENST00000494610 CHURC1-FNTBB4DL54 471 aa12.8□□□□□ -0.36
CSNK1E-212ENST00000494610 TMEM189-UBE2V1I3L0A0 370 aa12.8□□□□□ -0.36
CSNK1E-212ENST00000494610 POLR2DO15514 142 aaKnown RBP12.8□□□□□ -0.36
CSNK1E-212ENST00000494610 HRO43593 1189 aa12.8□□□□□ -0.36
CSNK1E-212ENST00000494610 TBC1D4O60343 1298 aa12.8□□□□□ -0.36
CSNK1E-212ENST00000494610 ABLIM3O94929 683 aa12.8□□□□□ -0.36
CSNK1E-212ENST00000494610 POU2F2P09086 479 aa12.8□□□□□ -0.36
CSNK1E-212ENST00000494610 SLFN14P0C7P3 912 aa12.8□□□□□ -0.36
CSNK1E-212ENST00000494610 MYL4P12829 197 aa12.8□□□□□ -0.36
CSNK1E-212ENST00000494610 CCNE1P24864 410 aa12.8□□□□□ -0.36
CSNK1E-212ENST00000494610 RPA1P27694 616 aa12.8□□□□□ -0.36
CSNK1E-212ENST00000494610 FNTBP49356 437 aa12.8□□□□□ -0.36
CSNK1E-212ENST00000494610 LMNB2Q03252 620 aa12.8□□□□□ -0.36
CSNK1E-212ENST00000494610 ELAVL2Q12926 359 aaKnown RBP12.8□□□□□ -0.36
CSNK1E-212ENST00000494610 CCDC6Q16204 474 aa12.8□□□□□ -0.36
CSNK1E-212ENST00000494610 SEZ6Q53EL9 994 aa12.8□□□□□ -0.36
CSNK1E-212ENST00000494610 PPM1JQ5JR12 505 aa12.8□□□□□ -0.36
CSNK1E-212ENST00000494610 ATF7IP2Q5U623 682 aa12.8□□□□□ -0.36
CSNK1E-212ENST00000494610 HEATR6Q6AI08 1181 aaKnown RBP12.8□□□□□ -0.36
CSNK1E-212ENST00000494610 KRBA2Q6ZNG9 492 aa12.8□□□□□ -0.36
CSNK1E-212ENST00000494610 Q6ZS52 159 aa12.8□□□□□ -0.36
CSNK1E-212ENST00000494610 MAP4K3Q8IVH8 894 aa12.8□□□□□ -0.36
CSNK1E-212ENST00000494610 ZNF461Q8TAF7 563 aa12.8□□□□□ -0.36
CSNK1E-212ENST00000494610 FAM3CQ92520 227 aa12.8□□□□□ -0.36
CSNK1E-212ENST00000494610 DHX58Q96C10 678 aa12.8□□□□□ -0.36
CSNK1E-212ENST00000494610 ASB16Q96NS5 453 aa12.8□□□□□ -0.36
CSNK1E-212ENST00000494610 NELL2Q99435 816 aa12.8□□□□□ -0.36
CSNK1E-212ENST00000494610 TRMT61BQ9BVS5 477 aaKnown RBP12.8□□□□□ -0.36
CSNK1E-212ENST00000494610 GTPBP4Q9BZE4 634 aaKnown RBP12.8□□□□□ -0.36
CSNK1E-212ENST00000494610 CHRDQ9H2X0 955 aa12.8□□□□□ -0.36
CSNK1E-212ENST00000494610 ZNF334Q9HCZ1 680 aaPredicted RBP12.8□□□□□ -0.36
CSNK1E-212ENST00000494610 FBXL5Q9UKA1 691 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms