RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 PLCG1P19174 1290 aa9.06□□□□□ -0.96
RIF1-211ENST00000494333 IBSPP21815 317 aaPredicted RBP9.06□□□□□ -0.96
RIF1-211ENST00000494333 CLCN3P51790 818 aa9.06□□□□□ -0.96
RIF1-211ENST00000494333 CRYBB1P53674 252 aaPredicted RBP9.06□□□□□ -0.96
RIF1-211ENST00000494333 NLRP11P59045 1033 aaKnown RBP9.06□□□□□ -0.96
RIF1-211ENST00000494333 PRKCEQ02156 737 aa9.06□□□□□ -0.96
RIF1-211ENST00000494333 GPM6BQ13491 265 aa9.06□□□□□ -0.96
RIF1-211ENST00000494333 BTG3Q14201 252 aaPredicted RBP9.06□□□□□ -0.96
RIF1-211ENST00000494333 UGCGQ16739 394 aa9.06□□□□□ -0.96
RIF1-211ENST00000494333 PPP4R3AQ6IN85 833 aa9.06□□□□□ -0.96
RIF1-211ENST00000494333 SLITRK4Q8IW52 837 aa9.06□□□□□ -0.96
RIF1-211ENST00000494333 LRRC71Q8N4P6 559 aa9.06□□□□□ -0.96
RIF1-211ENST00000494333 RDM1Q8NG50 284 aa9.06□□□□□ -0.96
RIF1-211ENST00000494333 ETNPPLQ8TBG4 499 aa9.06□□□□□ -0.96
RIF1-211ENST00000494333 TMEM40Q8WWA1 233 aa9.06□□□□□ -0.96
RIF1-211ENST00000494333 LINC01599Q8WXQ3 324 aa9.06□□□□□ -0.96
RIF1-211ENST00000494333 GTF3C6Q969F1 213 aa9.06□□□□□ -0.96
RIF1-211ENST00000494333 ZNF689Q96CS4 500 aaPredicted RBP9.06□□□□□ -0.96
RIF1-211ENST00000494333 TMX1Q9H3N1 280 aa9.06□□□□□ -0.96
RIF1-211ENST00000494333 ADAM30Q9UKF2 790 aa9.06□□□□□ -0.96
RIF1-211ENST00000494333 ST3GAL5Q9UNP4 418 aa9.06□□□□□ -0.96
RIF1-211ENST00000494333 AKT3Q9Y243 479 aa9.06□□□□□ -0.96
RIF1-211ENST00000494333 GBF1Q92538 1859 aa9.06□□□□□ -0.96
RIF1-211ENST00000494333 DENND3A2RUS2 1198 aa9.05□□□□□ -0.96
RIF1-211ENST00000494333 FAM170BA6NMN3 283 aa9.05□□□□□ -0.96
RIF1-211ENST00000494333 H3BNC9 293 aa9.05□□□□□ -0.96
RIF1-211ENST00000494333 JAK2O60674 1132 aa9.05□□□□□ -0.96
RIF1-211ENST00000494333 GPR32O75388 356 aa9.05□□□□□ -0.96
RIF1-211ENST00000494333 HTR3BO95264 441 aa9.05□□□□□ -0.96
RIF1-211ENST00000494333 STAG3L1P0CL83 205 aa9.05□□□□□ -0.96
RIF1-211ENST00000494333 GCFC2P16383 781 aaKnown RBP9.05□□□□□ -0.96
RIF1-211ENST00000494333 KRT2P35908 639 aa9.05□□□□□ -0.96
RIF1-211ENST00000494333 BMPR1AP36894 532 aa9.05□□□□□ -0.96
RIF1-211ENST00000494333 PTPROQ16827 1216 aa9.05□□□□□ -0.96
RIF1-211ENST00000494333 AAK1Q2M2I8 961 aa9.05□□□□□ -0.96
RIF1-211ENST00000494333 XKR3Q5GH77 459 aa9.05□□□□□ -0.96
RIF1-211ENST00000494333 EARS2Q5JPH6 523 aaKnown RBP9.05□□□□□ -0.96
RIF1-211ENST00000494333 ODR4Q5SWX8 454 aa9.05□□□□□ -0.96
RIF1-211ENST00000494333 B3GNT9Q6UX72 402 aa9.05□□□□□ -0.96
RIF1-211ENST00000494333 ARMCX6Q7L4S7 300 aa9.05□□□□□ -0.96
RIF1-211ENST00000494333 ZDHHC13Q8IUH4 622 aa9.05□□□□□ -0.96
RIF1-211ENST00000494333 NSUN7Q8NE18 718 aaKnown RBP9.05□□□□□ -0.96
RIF1-211ENST00000494333 ACSF2Q96CM8 615 aaPredicted RBP9.05□□□□□ -0.96
RIF1-211ENST00000494333 ZNF668Q96K58 619 aaPredicted RBP9.05□□□□□ -0.96
RIF1-211ENST00000494333 FAM20AQ96MK3 541 aa9.05□□□□□ -0.96
RIF1-211ENST00000494333 MAP7D2Q96T17 732 aa9.05□□□□□ -0.96
RIF1-211ENST00000494333 ADAM2Q99965 735 aa9.05□□□□□ -0.96
RIF1-211ENST00000494333 SH2D3AQ9BRG2 576 aa9.05□□□□□ -0.96
RIF1-211ENST00000494333 FOXQ1Q9C009 403 aa9.05□□□□□ -0.96
RIF1-211ENST00000494333 CCSER2Q9H7U1 834 aa9.05□□□□□ -0.96
RIF1-211ENST00000494333 ERVK-5Q9HDB9 667 aa9.05□□□□□ -0.96
RIF1-211ENST00000494333 KCNMB3Q9NPA1 279 aa9.05□□□□□ -0.96
RIF1-211ENST00000494333 REV1Q9UBZ9 1251 aa9.05□□□□□ -0.96
RIF1-211ENST00000494333 COG5Q9UP83 839 aa9.05□□□□□ -0.96
RIF1-211ENST00000494333 PCDHB7Q9Y5E2 793 aa9.05□□□□□ -0.96
RIF1-211ENST00000494333 PCDHB14Q9Y5E9 798 aa9.05□□□□□ -0.96
RIF1-211ENST00000494333 ADGRA3Q8IWK6 1321 aa9.05□□□□□ -0.96
RIF1-211ENST00000494333 KAT6AQ92794 2004 aa9.04□□□□□ -0.96
RIF1-211ENST00000494333 TMEM150BA6NC51 233 aa9.04□□□□□ -0.96
RIF1-211ENST00000494333 BTBD18B2RXH4 712 aa9.04□□□□□ -0.96
RIF1-211ENST00000494333 MGEA5O60502 916 aa9.04□□□□□ -0.96
RIF1-211ENST00000494333 LRIG2O94898 1065 aa9.04□□□□□ -0.96
RIF1-211ENST00000494333 STBD1O95210 358 aa9.04□□□□□ -0.96
RIF1-211ENST00000494333 BAG4O95429 457 aaKnown RBP9.04□□□□□ -0.96
RIF1-211ENST00000494333 RB1P06400 928 aa9.04□□□□□ -0.96
RIF1-211ENST00000494333 FAM87AP0C7U9 286 aa9.04□□□□□ -0.96
RIF1-211ENST00000494333 MCM4P33991 863 aa9.04□□□□□ -0.96
RIF1-211ENST00000494333 CTNNB1P35222 781 aa9.04□□□□□ -0.96
RIF1-211ENST00000494333 SARSP49591 514 aaKnown RBP9.04□□□□□ -0.96
RIF1-211ENST00000494333 KCNQ1P51787 676 aa9.04□□□□□ -0.96
RIF1-211ENST00000494333 PSMC5P62195 406 aa9.04□□□□□ -0.96
RIF1-211ENST00000494333 PPP2R5CQ13362 524 aa9.04□□□□□ -0.96
RIF1-211ENST00000494333 TRIM29Q14134 588 aa9.04□□□□□ -0.96
RIF1-211ENST00000494333 TARBP2Q15633 366 aaKnown RBP9.04□□□□□ -0.96
RIF1-211ENST00000494333 MTERF2Q49AM1 385 aa9.04□□□□□ -0.96
RIF1-211ENST00000494333 TMEM201Q5SNT2 666 aa9.04□□□□□ -0.96
RIF1-211ENST00000494333 PRAMEF13Q5VWM6 474 aa9.04□□□□□ -0.96
RIF1-211ENST00000494333 SLC6A19Q695T7 634 aa9.04□□□□□ -0.96
RIF1-211ENST00000494333 OGFOD3Q6PK18 319 aa9.04□□□□□ -0.96
RIF1-211ENST00000494333 FAM43BQ6ZT52 329 aaPredicted RBP9.04□□□□□ -0.96
RIF1-211ENST00000494333 SLC24A5Q71RS6 500 aa9.04□□□□□ -0.96
RIF1-211ENST00000494333 FAM228AQ86W67 206 aa9.04□□□□□ -0.96
RIF1-211ENST00000494333 MCATQ8IVS2 390 aaKnown RBP9.04□□□□□ -0.96
RIF1-211ENST00000494333 MRPL41Q8IXM3 137 aaKnown RBP9.04□□□□□ -0.96
RIF1-211ENST00000494333 LINC01465Q8N7H1 131 aa9.04□□□□□ -0.96
RIF1-211ENST00000494333 GIMAP7Q8NHV1 300 aa9.04□□□□□ -0.96
RIF1-211ENST00000494333 HAS1Q92839 578 aa9.04□□□□□ -0.96
RIF1-211ENST00000494333 MRPL38Q96DV4 380 aaKnown RBP9.04□□□□□ -0.96
RIF1-211ENST00000494333 NAP1L4Q99733 375 aaKnown RBP9.04□□□□□ -0.96
RIF1-211ENST00000494333 DUSP23Q9BVJ7 150 aa9.04□□□□□ -0.96
RIF1-211ENST00000494333 ADAMTS10Q9H324 1103 aa9.04□□□□□ -0.96
RIF1-211ENST00000494333 RC3H2Q9HBD1 1191 aaKnown RBP9.04□□□□□ -0.96
RIF1-211ENST00000494333 RGS18Q9NS28 235 aa9.04□□□□□ -0.96
RIF1-211ENST00000494333 LIMCH1Q9UPQ0 1083 aa9.04□□□□□ -0.96
RIF1-211ENST00000494333 RWDD3Q9Y3V2 267 aa9.04□□□□□ -0.96
RIF1-211ENST00000494333 EYSQ5T1H1 3165 aa9.04□□□□□ -0.96
RIF1-211ENST00000494333 PRRC2BQ5JSZ5 2229 aaKnown RBP9.03□□□□□ -0.96
RIF1-211ENST00000494333 C9IYK1 514 aa9.03□□□□□ -0.96
RIF1-211ENST00000494333 C5orf67F2Z3F1 127 aa9.03□□□□□ -0.96
RIF1-211ENST00000494333 TBX3O15119 743 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms