RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 MYO1EQ12965 1108 aa13.44□□□□□ -0.26
TRA2A-209ENST00000494255 BIRC3Q13489 604 aa13.44□□□□□ -0.26
TRA2A-209ENST00000494255 TRPC3Q13507 836 aa13.44□□□□□ -0.26
TRA2A-209ENST00000494255 CAVIN1Q6NZI2 390 aaKnown RBP13.44□□□□□ -0.26
TRA2A-209ENST00000494255 PRSS55Q6UWB4 352 aaPredicted RBP13.44□□□□□ -0.26
TRA2A-209ENST00000494255 PPFIBP1Q86W92 1011 aa13.44□□□□□ -0.26
TRA2A-209ENST00000494255 PLEKHO2Q8TD55 490 aa13.44□□□□□ -0.26
TRA2A-209ENST00000494255 SENP8Q96LD8 212 aa13.44□□□□□ -0.26
TRA2A-209ENST00000494255 KLHL5Q96PQ7 755 aa13.44□□□□□ -0.26
TRA2A-209ENST00000494255 RXFP1Q9HBX9 757 aa13.44□□□□□ -0.26
TRA2A-209ENST00000494255 CLDND1Q9NY35 253 aa13.44□□□□□ -0.26
TRA2A-209ENST00000494255 FNIP2Q9P278 1114 aa13.44□□□□□ -0.26
TRA2A-209ENST00000494255 SIX4Q9UIU6 781 aa13.44□□□□□ -0.26
TRA2A-209ENST00000494255 VWA8A3KMH1 1905 aa13.44□□□□□ -0.26
TRA2A-209ENST00000494255 SCN1AP35498 2009 aa13.44□□□□□ -0.26
TRA2A-209ENST00000494255 TRANK1O15050 2925 aa13.44□□□□□ -0.26
TRA2A-209ENST00000494255 KPNA7A9QM74 516 aa13.44□□□□□ -0.26
TRA2A-209ENST00000494255 STX10O60499 249 aa13.44□□□□□ -0.26
TRA2A-209ENST00000494255 CLASP2O75122 1294 aaKnown RBP13.44□□□□□ -0.26
TRA2A-209ENST00000494255 CNPP09543 421 aaKnown RBP13.44□□□□□ -0.26
TRA2A-209ENST00000494255 GTF2F1P35269 517 aaKnown RBP eCLIP13.44□□□□□ -0.267e-10■□□□□ 10.7
TRA2A-209ENST00000494255 NDUFV1P49821 464 aa13.44□□□□□ -0.26
TRA2A-209ENST00000494255 DLG4P78352 724 aa13.44□□□□□ -0.26
TRA2A-209ENST00000494255 CLDN10P78369 228 aa13.44□□□□□ -0.26
TRA2A-209ENST00000494255 TPD52L1Q16890 204 aaPredicted RBP13.44□□□□□ -0.26
TRA2A-209ENST00000494255 KLHL40Q2TBA0 621 aa13.44□□□□□ -0.26
TRA2A-209ENST00000494255 DPCR1Q3MIW9 517 aa13.44□□□□□ -0.26
TRA2A-209ENST00000494255 CCDC40Q4G0X9 1142 aa13.44□□□□□ -0.26
TRA2A-209ENST00000494255 FILIP1Q7Z7B0 1213 aa13.44□□□□□ -0.26
TRA2A-209ENST00000494255 LNX1Q8TBB1 728 aaPredicted RBP13.44□□□□□ -0.26
TRA2A-209ENST00000494255 ZNF516Q92618 1163 aa13.44□□□□□ -0.26
TRA2A-209ENST00000494255 PABPC5Q96DU9 382 aaKnown RBP13.44□□□□□ -0.26
TRA2A-209ENST00000494255 DUSP9Q99956 384 aaKnown RBP13.44□□□□□ -0.26
TRA2A-209ENST00000494255 GZF1Q9H116 711 aaPredicted RBP13.44□□□□□ -0.26
TRA2A-209ENST00000494255 METTL14Q9HCE5 456 aaKnown RBP13.44□□□□□ -0.26
TRA2A-209ENST00000494255 TMEM63CQ9P1W3 806 aa13.44□□□□□ -0.26
TRA2A-209ENST00000494255 ARMCX3Q9UH62 379 aaPredicted RBP13.44□□□□□ -0.26
TRA2A-209ENST00000494255 DSEQ9UL01 958 aa13.44□□□□□ -0.26
TRA2A-209ENST00000494255 CYB561D2O14569 222 aa13.43□□□□□ -0.26
TRA2A-209ENST00000494255 SPTLC1O15269 473 aa13.43□□□□□ -0.26
TRA2A-209ENST00000494255 TEX28O15482 410 aa13.43□□□□□ -0.26
TRA2A-209ENST00000494255 CLSTN1O94985 981 aa13.43□□□□□ -0.26
TRA2A-209ENST00000494255 GNA14O95837 355 aa13.43□□□□□ -0.26
TRA2A-209ENST00000494255 TRIM49P0CI25 452 aa13.43□□□□□ -0.26
TRA2A-209ENST00000494255 TRIM49CP0CI26 452 aa13.43□□□□□ -0.26
TRA2A-209ENST00000494255 TYMPP19971 482 aa13.43□□□□□ -0.26
TRA2A-209ENST00000494255 ERCC5P28715 1186 aaPredicted RBP13.43□□□□□ -0.26
TRA2A-209ENST00000494255 ADAM15Q13444 863 aa13.43□□□□□ -0.26
TRA2A-209ENST00000494255 SKOR2Q2VWA4 1001 aaPredicted RBP13.43□□□□□ -0.26
TRA2A-209ENST00000494255 CT47A1Q5JQC4 288 aaPredicted RBP13.43□□□□□ -0.26
TRA2A-209ENST00000494255 VARS2Q5ST30 1063 aaKnown RBP13.43□□□□□ -0.26
TRA2A-209ENST00000494255 TCERG1LQ5VWI1 586 aa13.43□□□□□ -0.26
TRA2A-209ENST00000494255 ZNF280DQ6N043 979 aa13.43□□□□□ -0.26
TRA2A-209ENST00000494255 METTL23Q86XA0 190 aa13.43□□□□□ -0.26
TRA2A-209ENST00000494255 GLYCTKQ8IVS8 523 aa13.43□□□□□ -0.26
TRA2A-209ENST00000494255 HLA-CQ95604 372 aa13.43□□□□□ -0.26
TRA2A-209ENST00000494255 HPDLQ96IR7 371 aa13.43□□□□□ -0.26
TRA2A-209ENST00000494255 SRRTQ9BXP5 876 aaKnown RBP13.43□□□□□ -0.26
TRA2A-209ENST00000494255 ANO10Q9NW15 660 aa13.43□□□□□ -0.26
TRA2A-209ENST00000494255 MTRRQ9UBK8 725 aa13.43□□□□□ -0.26
TRA2A-209ENST00000494255 COG5Q9UP83 839 aa13.43□□□□□ -0.26
TRA2A-209ENST00000494255 SZT2Q5T011 3432 aa13.43□□□□□ -0.26
TRA2A-209ENST00000494255 HUS1O60921 280 aa13.42□□□□□ -0.26
TRA2A-209ENST00000494255 C4BPAP04003 597 aaKnown RBP13.42□□□□□ -0.26
TRA2A-209ENST00000494255 RPL17P18621 184 aaKnown RBP13.42□□□□□ -0.26
TRA2A-209ENST00000494255 YWHAHQ04917 246 aaPredicted RBP13.42□□□□□ -0.26
TRA2A-209ENST00000494255 STX1AQ16623 288 aa13.42□□□□□ -0.26
TRA2A-209ENST00000494255 CTXN3Q4LDR2 81 aa13.42□□□□□ -0.26
TRA2A-209ENST00000494255 DCAF17Q5H9S7 520 aaPredicted RBP13.42□□□□□ -0.26
TRA2A-209ENST00000494255 TDRD10Q5VZ19 366 aaKnown RBP13.42□□□□□ -0.26
TRA2A-209ENST00000494255 LLGL2Q6P1M3 1020 aa13.42□□□□□ -0.26
TRA2A-209ENST00000494255 ELMSAN1Q6PJG2 1045 aa13.42□□□□□ -0.26
TRA2A-209ENST00000494255 FRMD5Q7Z6J6 570 aa13.42□□□□□ -0.26
TRA2A-209ENST00000494255 CXorf38Q8TB03 319 aa13.42□□□□□ -0.26
TRA2A-209ENST00000494255 BORCS6Q96GS4 357 aa13.42□□□□□ -0.26
TRA2A-209ENST00000494255 OXCT2Q9BYC2 517 aaPredicted RBP13.42□□□□□ -0.26
TRA2A-209ENST00000494255 UBE2ZQ9H832 354 aaPredicted RBP13.42□□□□□ -0.26
TRA2A-209ENST00000494255 MMRN2Q9H8L6 949 aa13.42□□□□□ -0.26
TRA2A-209ENST00000494255 TIMM13Q9Y5L4 95 aaPredicted RBP13.42□□□□□ -0.26
TRA2A-209ENST00000494255 BACE2Q9Y5Z0 518 aa13.42□□□□□ -0.26
TRA2A-209ENST00000494255 SPDYE4A6NLX3 237 aa13.41□□□□□ -0.26
TRA2A-209ENST00000494255 LINC01565O15544 149 aa13.41□□□□□ -0.26
TRA2A-209ENST00000494255 GLUD1P00367 558 aa13.41□□□□□ -0.26
TRA2A-209ENST00000494255 ATICP31939 592 aa13.41□□□□□ -0.26
TRA2A-209ENST00000494255 GTF2H1P32780 548 aa13.41□□□□□ -0.26
TRA2A-209ENST00000494255 PIK3CAP42336 1068 aa13.41□□□□□ -0.26
TRA2A-209ENST00000494255 GCLMP48507 274 aa13.41□□□□□ -0.26
TRA2A-209ENST00000494255 NCOA4Q13772 614 aa13.41□□□□□ -0.26
TRA2A-209ENST00000494255 COL19A1Q14993 1142 aa13.41□□□□□ -0.26
TRA2A-209ENST00000494255 CTC1Q2NKJ3 1217 aa13.41□□□□□ -0.26
TRA2A-209ENST00000494255 ZACNQ401N2 412 aa13.41□□□□□ -0.26
TRA2A-209ENST00000494255 OVOS1Q6IE37 1185 aa13.41□□□□□ -0.26
TRA2A-209ENST00000494255 SV2AQ7L0J3 742 aa13.41□□□□□ -0.26
TRA2A-209ENST00000494255 CASP10Q92851 521 aa13.41□□□□□ -0.26
TRA2A-209ENST00000494255 CLSTN3Q9BQT9 956 aa13.41□□□□□ -0.26
TRA2A-209ENST00000494255 TMEM8AQ9HCN3 771 aa13.41□□□□□ -0.26
TRA2A-209ENST00000494255 GDAP2Q9NXN4 497 aa13.41□□□□□ -0.26
TRA2A-209ENST00000494255 THEGQ9P2T0 379 aa13.41□□□□□ -0.26
TRA2A-209ENST00000494255 DPP7Q9UHL4 492 aa13.41□□□□□ -0.26
TRA2A-209ENST00000494255 SNX9Q9Y5X1 595 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms