RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 MAGEB18Q96M61 343 aa12.2□□□□□ -0.46
RFC4-214ENST00000494047 UIMC1Q96RL1 719 aa12.2□□□□□ -0.46
RFC4-214ENST00000494047 OSBPL7Q9BZF2 842 aa12.2□□□□□ -0.46
RFC4-214ENST00000494047 DCLK3Q9C098 648 aa12.2□□□□□ -0.46
RFC4-214ENST00000494047 SSU72Q9NP77 194 aaKnown RBP12.2□□□□□ -0.46
RFC4-214ENST00000494047 PICK1Q9NRD5 415 aa12.2□□□□□ -0.46
RFC4-214ENST00000494047 PARVAQ9NVD7 372 aa12.2□□□□□ -0.46
RFC4-214ENST00000494047 ARHGAP28Q9P2N2 729 aa12.2□□□□□ -0.46
RFC4-214ENST00000494047 ANAPC5Q9UJX4 755 aa12.2□□□□□ -0.46
RFC4-214ENST00000494047 STRIP2Q9ULQ0 834 aa12.2□□□□□ -0.46
RFC4-214ENST00000494047 ARL2BPQ9Y2Y0 163 aa12.2□□□□□ -0.46
RFC4-214ENST00000494047 CEP83Q9Y592 693 aa12.2□□□□□ -0.46
RFC4-214ENST00000494047 CCL15-CCL14A0A0B4J2E2 113 aa12.19□□□□□ -0.46
RFC4-214ENST00000494047 TLDC2A0PJX2 215 aa12.19□□□□□ -0.46
RFC4-214ENST00000494047 PHF20L1A8MW92 1017 aa12.19□□□□□ -0.46
RFC4-214ENST00000494047 DDX39AO00148 427 aaKnown RBP12.19□□□□□ -0.46
RFC4-214ENST00000494047 GPR25O00155 361 aa12.19□□□□□ -0.46
RFC4-214ENST00000494047 CXCL11O14625 94 aa12.19□□□□□ -0.46
RFC4-214ENST00000494047 MGRN1O60291 552 aa12.19□□□□□ -0.46
RFC4-214ENST00000494047 SNX3O60493 162 aa12.19□□□□□ -0.46
RFC4-214ENST00000494047 VIMP08670 466 aaKnown RBP12.19□□□□□ -0.46
RFC4-214ENST00000494047 RFC5P40937 340 aa12.19□□□□□ -0.46
RFC4-214ENST00000494047 NAMPTP43490 491 aa12.19□□□□□ -0.46
RFC4-214ENST00000494047 LIG4P49917 911 aa12.19□□□□□ -0.46
RFC4-214ENST00000494047 RPS6P62753 249 aaKnown RBP12.19□□□□□ -0.46
RFC4-214ENST00000494047 MRPS9P82933 396 aaKnown RBP12.19□□□□□ -0.46
RFC4-214ENST00000494047 CNGA2Q16280 664 aa12.19□□□□□ -0.46
RFC4-214ENST00000494047 PKN2Q16513 984 aaKnown RBP12.19□□□□□ -0.46
RFC4-214ENST00000494047 CCL15Q16663 113 aa12.19□□□□□ -0.46
RFC4-214ENST00000494047 SHROOM1Q2M3G4 852 aaPredicted RBP12.19□□□□□ -0.46
RFC4-214ENST00000494047 ZACNQ401N2 412 aa12.19□□□□□ -0.46
RFC4-214ENST00000494047 KCNV1Q6PIU1 500 aa12.19□□□□□ -0.46
RFC4-214ENST00000494047 SV2AQ7L0J3 742 aa12.19□□□□□ -0.46
RFC4-214ENST00000494047 CBWD2Q8IUF1 395 aa12.19□□□□□ -0.46
RFC4-214ENST00000494047 RCOR2Q8IZ40 523 aa12.19□□□□□ -0.46
RFC4-214ENST00000494047 SCYL3Q8IZE3 742 aa12.19□□□□□ -0.46
RFC4-214ENST00000494047 CCDC63Q8NA47 563 aa12.19□□□□□ -0.46
RFC4-214ENST00000494047 TTC13Q8NBP0 860 aa12.19□□□□□ -0.46
RFC4-214ENST00000494047 CEP170P1Q96L14 293 aa12.19□□□□□ -0.46
RFC4-214ENST00000494047 RAB3IPQ96QF0 476 aaPredicted RBP12.19□□□□□ -0.46
RFC4-214ENST00000494047 PCDHB18PQ96TA0 734 aa12.19□□□□□ -0.46
RFC4-214ENST00000494047 SEMA4AQ9H3S1 761 aa12.19□□□□□ -0.46
RFC4-214ENST00000494047 KLHL14Q9P2G3 628 aa12.19□□□□□ -0.46
RFC4-214ENST00000494047 RPL26L1Q9UNX3 145 aaKnown RBP12.19□□□□□ -0.46
RFC4-214ENST00000494047 KCNH4Q9UQ05 1017 aa12.19□□□□□ -0.46
RFC4-214ENST00000494047 CNTN6Q9UQ52 1028 aa12.19□□□□□ -0.46
RFC4-214ENST00000494047 NR2E1Q9Y466 385 aa12.19□□□□□ -0.46
RFC4-214ENST00000494047 PARP14Q460N5 1801 aa12.19□□□□□ -0.46
RFC4-214ENST00000494047 ZNFX1Q9P2E3 1918 aaKnown RBP12.19□□□□□ -0.46
RFC4-214ENST00000494047 LOC285556D6RIA3 1793 aa12.19□□□□□ -0.46
RFC4-214ENST00000494047 IGF2BP3O00425 579 aaKnown RBP eCLIP12.18□□□□□ -0.46
RFC4-214ENST00000494047 IRF6O14896 467 aa12.18□□□□□ -0.46
RFC4-214ENST00000494047 ZBTB39O15060 712 aa12.18□□□□□ -0.46
RFC4-214ENST00000494047 ADSSP30520 456 aa12.18□□□□□ -0.46
RFC4-214ENST00000494047 PHBP35232 272 aa12.18□□□□□ -0.46
RFC4-214ENST00000494047 ADCY8P40145 1251 aa12.18□□□□□ -0.46
RFC4-214ENST00000494047 PIK3CAP42336 1068 aa12.18□□□□□ -0.46
RFC4-214ENST00000494047 RASSF2P50749 326 aa12.18□□□□□ -0.46
RFC4-214ENST00000494047 GSCP56915 257 aaPredicted RBP12.18□□□□□ -0.46
RFC4-214ENST00000494047 UBXN2AP68543 259 aa12.18□□□□□ -0.46
RFC4-214ENST00000494047 JAG1P78504 1218 aa12.18□□□□□ -0.46
RFC4-214ENST00000494047 RNASELQ05823 741 aaKnown RBP12.18□□□□□ -0.46
RFC4-214ENST00000494047 MORF4L2Q15014 288 aa12.18□□□□□ -0.46
RFC4-214ENST00000494047 PREPLQ4J6C6 727 aaPredicted RBP12.18□□□□□ -0.46
RFC4-214ENST00000494047 ZC3H12AQ5D1E8 599 aaKnown RBP12.18□□□□□ -0.46
RFC4-214ENST00000494047 WLSQ5T9L3 541 aa12.18□□□□□ -0.46
RFC4-214ENST00000494047 TTC27Q6P3X3 843 aa12.18□□□□□ -0.46
RFC4-214ENST00000494047 RGS9BPQ6ZS82 235 aa12.18□□□□□ -0.46
RFC4-214ENST00000494047 MON1BQ7L1V2 547 aa12.18□□□□□ -0.46
RFC4-214ENST00000494047 POLNQ7Z5Q5 900 aa12.18□□□□□ -0.46
RFC4-214ENST00000494047 VSIG10LQ86VR7 867 aa12.18□□□□□ -0.46
RFC4-214ENST00000494047 KSR1Q8IVT5 923 aa12.18□□□□□ -0.46
RFC4-214ENST00000494047 ZCCHC9Q8N567 271 aaKnown RBP12.18□□□□□ -0.46
RFC4-214ENST00000494047 GIMAP7Q8NHV1 300 aa12.18□□□□□ -0.46
RFC4-214ENST00000494047 CKAP2Q8WWK9 683 aa12.18□□□□□ -0.46
RFC4-214ENST00000494047 C12orf42Q96LP6 360 aa12.18□□□□□ -0.46
RFC4-214ENST00000494047 TMEM134Q9H6X4 195 aa12.18□□□□□ -0.46
RFC4-214ENST00000494047 JPH1Q9HDC5 661 aaPredicted RBP12.18□□□□□ -0.46
RFC4-214ENST00000494047 TXLNGQ9NUQ3 528 aa12.18□□□□□ -0.46
RFC4-214ENST00000494047 SLC24A2Q9UI40 661 aa12.18□□□□□ -0.46
RFC4-214ENST00000494047 SHOC2Q9UQ13 582 aa12.18□□□□□ -0.46
RFC4-214ENST00000494047 DRG1Q9Y295 367 aaKnown RBP12.18□□□□□ -0.46
RFC4-214ENST00000494047 GSTTP1A0A1W2PQM5 241 aa12.18□□□□□ -0.46
RFC4-214ENST00000494047 C19orf81C9J6K1 198 aa12.18□□□□□ -0.46
RFC4-214ENST00000494047 ANKRD65E5RJM6 399 aa12.18□□□□□ -0.46
RFC4-214ENST00000494047 NFIBO00712 420 aa12.18□□□□□ -0.46
RFC4-214ENST00000494047 CLDN3O15551 220 aa12.18□□□□□ -0.46
RFC4-214ENST00000494047 FKTNO75072 461 aa12.18□□□□□ -0.46
RFC4-214ENST00000494047 GJB6O95452 261 aa12.18□□□□□ -0.46
RFC4-214ENST00000494047 OAS1P00973 400 aaKnown RBP12.18□□□□□ -0.46
RFC4-214ENST00000494047 SHBGP04278 402 aa12.18□□□□□ -0.46
RFC4-214ENST00000494047 DLATP10515 647 aaKnown RBP12.18□□□□□ -0.46
RFC4-214ENST00000494047 FGFR4P22455 802 aa12.18□□□□□ -0.46
RFC4-214ENST00000494047 ALDH3A1P30838 453 aa12.18□□□□□ -0.46
RFC4-214ENST00000494047 POLR2BP30876 1174 aaKnown RBP12.18□□□□□ -0.46
RFC4-214ENST00000494047 STX2P32856 288 aa12.18□□□□□ -0.46
RFC4-214ENST00000494047 EFNA5P52803 228 aa12.18□□□□□ -0.46
RFC4-214ENST00000494047 KLF1Q13351 362 aaPredicted RBP12.18□□□□□ -0.46
RFC4-214ENST00000494047 CUL2Q13617 745 aa12.18□□□□□ -0.46
RFC4-214ENST00000494047 PIGHQ14442 188 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms