RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 NR2F2P24468 414 aa6.55□□□□□ -1.36
CPSF7-213ENST00000494016 PON1P27169 355 aa6.55□□□□□ -1.36
CPSF7-213ENST00000494016 MAGEA1P43355 309 aa6.55□□□□□ -1.36
CPSF7-213ENST00000494016 VAV2P52735 878 aa6.55□□□□□ -1.36
CPSF7-213ENST00000494016 RING1Q06587 406 aa6.55□□□□□ -1.36
CPSF7-213ENST00000494016 PWP1Q13610 501 aa6.55□□□□□ -1.36
CPSF7-213ENST00000494016 BAATQ14032 418 aaPredicted RBP6.55□□□□□ -1.36
CPSF7-213ENST00000494016 COG2Q14746 738 aa6.55□□□□□ -1.36
CPSF7-213ENST00000494016 TMEM132BQ14DG7 1078 aa6.55□□□□□ -1.36
CPSF7-213ENST00000494016 NOL9Q5SY16 702 aaKnown RBP6.55□□□□□ -1.36
CPSF7-213ENST00000494016 CCDC122Q5T0U0 273 aa6.55□□□□□ -1.36
CPSF7-213ENST00000494016 KLHDC7AQ5VTJ3 777 aa6.55□□□□□ -1.36
CPSF7-213ENST00000494016 PAPD7Q5XG87 772 aaKnown RBP6.55□□□□□ -1.36
CPSF7-213ENST00000494016 SDE2Q6IQ49 451 aa6.55□□□□□ -1.36
CPSF7-213ENST00000494016 FBXO38Q6PIJ6 1188 aa6.55□□□□□ -1.36
CPSF7-213ENST00000494016 PAOXQ6QHF9 649 aa6.55□□□□□ -1.36
CPSF7-213ENST00000494016 DLK2Q6UY11 383 aa6.55□□□□□ -1.36
CPSF7-213ENST00000494016 RNF207Q6ZRF8 634 aa6.55□□□□□ -1.36
CPSF7-213ENST00000494016 TRAPPC11Q7Z392 1133 aa6.55□□□□□ -1.36
CPSF7-213ENST00000494016 IRF2BP2Q7Z5L9 587 aa6.55□□□□□ -1.36
CPSF7-213ENST00000494016 APBB1IPQ7Z5R6 666 aaPredicted RBP6.55□□□□□ -1.36
CPSF7-213ENST00000494016 SRGAP1Q7Z6B7 1085 aa6.55□□□□□ -1.36
CPSF7-213ENST00000494016 RELL1Q8IUW5 271 aa6.55□□□□□ -1.36
CPSF7-213ENST00000494016 APOBEC3FQ8IUX4 373 aaKnown RBP6.55□□□□□ -1.36
CPSF7-213ENST00000494016 NEK9Q8TD19 979 aa6.55□□□□□ -1.36
CPSF7-213ENST00000494016 JAKMIP2Q96AA8 810 aa6.55□□□□□ -1.36
CPSF7-213ENST00000494016 CCDC42Q96M95 316 aa6.55□□□□□ -1.36
CPSF7-213ENST00000494016 TMEM74Q96NL1 305 aa6.55□□□□□ -1.36
CPSF7-213ENST00000494016 WRNIP1Q96S55 665 aa6.55□□□□□ -1.36
CPSF7-213ENST00000494016 RMDN3Q96TC7 470 aa6.55□□□□□ -1.36
CPSF7-213ENST00000494016 NAPGQ99747 312 aaPredicted RBP6.55□□□□□ -1.36
CPSF7-213ENST00000494016 LXNQ9BS40 222 aa6.55□□□□□ -1.36
CPSF7-213ENST00000494016 CRACR2AQ9BSW2 395 aa6.55□□□□□ -1.36
CPSF7-213ENST00000494016 CCDC94Q9BW85 323 aaPredicted RBP6.55□□□□□ -1.36
CPSF7-213ENST00000494016 LSM14BQ9BX40 385 aaKnown RBP6.55□□□□□ -1.36
CPSF7-213ENST00000494016 ZSWIM4Q9H7M6 989 aa6.55□□□□□ -1.36
CPSF7-213ENST00000494016 PARVGQ9HBI0 331 aa6.55□□□□□ -1.36
CPSF7-213ENST00000494016 AS3MTQ9HBK9 375 aa6.55□□□□□ -1.36
CPSF7-213ENST00000494016 SIX2Q9NPC8 291 aa6.55□□□□□ -1.36
CPSF7-213ENST00000494016 PLCB1Q9NQ66 1216 aa6.55□□□□□ -1.36
CPSF7-213ENST00000494016 PICK1Q9NRD5 415 aa6.55□□□□□ -1.36
CPSF7-213ENST00000494016 HOMER2Q9NSB8 354 aa6.55□□□□□ -1.36
CPSF7-213ENST00000494016 TBC1D22BQ9NU19 505 aa6.55□□□□□ -1.36
CPSF7-213ENST00000494016 ZNF446Q9NWS9 450 aa6.55□□□□□ -1.36
CPSF7-213ENST00000494016 AIPL1Q9NZN9 384 aa6.55□□□□□ -1.36
CPSF7-213ENST00000494016 KCND2Q9NZV8 630 aa6.55□□□□□ -1.36
CPSF7-213ENST00000494016 CEP72Q9P209 647 aa6.55□□□□□ -1.36
CPSF7-213ENST00000494016 ARMCX3Q9UH62 379 aaPredicted RBP6.55□□□□□ -1.36
CPSF7-213ENST00000494016 ODF2LQ9ULJ1 636 aa6.55□□□□□ -1.36
CPSF7-213ENST00000494016 MYO6Q9UM54 1294 aa6.55□□□□□ -1.36
CPSF7-213ENST00000494016 GUCA1BQ9UMX6 200 aa6.55□□□□□ -1.36
CPSF7-213ENST00000494016 ZMYM2Q9UBW7 1377 aa6.55□□□□□ -1.36
CPSF7-213ENST00000494016 SSC5DA1L4H1 1573 aa6.54□□□□□ -1.36
CPSF7-213ENST00000494016 SSU72P8A0A1W2PR75 194 aa6.54□□□□□ -1.36
CPSF7-213ENST00000494016 TLDC2A0PJX2 215 aa6.54□□□□□ -1.36
CPSF7-213ENST00000494016 ARHGEF35A5YM69 484 aa6.54□□□□□ -1.36
CPSF7-213ENST00000494016 DCDC2CA8MYV0 355 aa6.54□□□□□ -1.36
CPSF7-213ENST00000494016 RBAK-RBAKDNI3L0D1 243 aa6.54□□□□□ -1.36
CPSF7-213ENST00000494016 SLC16A3O15427 465 aaKnown RBP6.54□□□□□ -1.36
CPSF7-213ENST00000494016 TFRCP02786 760 aaKnown RBP6.54□□□□□ -1.36
CPSF7-213ENST00000494016 ATP1A1P05023 1023 aaKnown RBP6.54□□□□□ -1.36
CPSF7-213ENST00000494016 SERPING1P05155 500 aa6.54□□□□□ -1.36
CPSF7-213ENST00000494016 ZSCAN20P17040 1043 aaPredicted RBP6.54□□□□□ -1.36
CPSF7-213ENST00000494016 RPL13P26373 211 aaKnown RBP6.54□□□□□ -1.36
CPSF7-213ENST00000494016 QARSP47897 775 aaKnown RBP6.54□□□□□ -1.36
CPSF7-213ENST00000494016 RARRES1P49788 294 aa6.54□□□□□ -1.36
CPSF7-213ENST00000494016 KIF11P52732 1056 aa6.54□□□□□ -1.36
CPSF7-213ENST00000494016 OAZ1P54368 228 aa6.54□□□□□ -1.36
CPSF7-213ENST00000494016 HMGCS2P54868 508 aa6.54□□□□□ -1.36
CPSF7-213ENST00000494016 POLR2FP61218 127 aaKnown RBP6.54□□□□□ -1.36
CPSF7-213ENST00000494016 LMNB2Q03252 620 aa6.54□□□□□ -1.36
CPSF7-213ENST00000494016 SEPT6Q14141 434 aa6.54□□□□□ -1.36
CPSF7-213ENST00000494016 MAP7Q14244 749 aa6.54□□□□□ -1.36
CPSF7-213ENST00000494016 INPP5AQ14642 412 aa6.54□□□□□ -1.36
CPSF7-213ENST00000494016 TTLL4Q14679 1199 aa6.54□□□□□ -1.36
CPSF7-213ENST00000494016 UGCGQ16739 394 aa6.54□□□□□ -1.36
CPSF7-213ENST00000494016 SUPT20HL1Q3ZLR7 823 aa6.54□□□□□ -1.36
CPSF7-213ENST00000494016 SFMBT2Q5VUG0 894 aa6.54□□□□□ -1.36
CPSF7-213ENST00000494016 XRRA1Q6P2D8 792 aa6.54□□□□□ -1.36
CPSF7-213ENST00000494016 LRFN4Q6PJG9 635 aa6.54□□□□□ -1.36
CPSF7-213ENST00000494016 NSMFQ6X4W1 530 aa6.54□□□□□ -1.36
CPSF7-213ENST00000494016 KIAA1328Q86T90 577 aa6.54□□□□□ -1.36
CPSF7-213ENST00000494016 PNMA8AQ86V59 439 aaPredicted RBP6.54□□□□□ -1.36
CPSF7-213ENST00000494016 C4orf19Q8IY42 314 aa6.54□□□□□ -1.36
CPSF7-213ENST00000494016 MNS1Q8NEH6 495 aa6.54□□□□□ -1.36
CPSF7-213ENST00000494016 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.54□□□□□ -1.36
CPSF7-213ENST00000494016 TMEM174Q8WUU8 243 aa6.54□□□□□ -1.36
CPSF7-213ENST00000494016 SLC35C1Q96A29 364 aa6.54□□□□□ -1.36
CPSF7-213ENST00000494016 PKNOX2Q96KN3 472 aa6.54□□□□□ -1.36
CPSF7-213ENST00000494016 RHOVQ96L33 236 aa6.54□□□□□ -1.36
CPSF7-213ENST00000494016 SENP7Q9BQF6 1050 aa6.54□□□□□ -1.36
CPSF7-213ENST00000494016 MIR1-1HGQ9H1L0 117 aa6.54□□□□□ -1.36
CPSF7-213ENST00000494016 PIDD1Q9HB75 910 aa6.54□□□□□ -1.36
CPSF7-213ENST00000494016 NLRC4Q9NPP4 1024 aa6.54□□□□□ -1.36
CPSF7-213ENST00000494016 ADARB2Q9NS39 739 aaKnown RBP6.54□□□□□ -1.36
CPSF7-213ENST00000494016 RNF146Q9NTX7 359 aa6.54□□□□□ -1.36
CPSF7-213ENST00000494016 DDX41Q9UJV9 622 aaKnown RBP6.54□□□□□ -1.36
CPSF7-213ENST00000494016 AJAP1Q9UKB5 411 aaPredicted RBP6.54□□□□□ -1.36
CPSF7-213ENST00000494016 ZNF214Q9UL59 606 aaPredicted RBP6.54□□□□□ -1.36
CPSF7-213ENST00000494016 TELO2Q9Y4R8 837 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms