RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 C9orf57Q5W0N0 161 aa13.69□□□□□ -0.22
HSPG2-212ENST00000493940 PDXDC1Q6P996 788 aa13.69□□□□□ -0.22
HSPG2-212ENST00000493940 GET4Q7L5D6 327 aaPredicted RBP13.69□□□□□ -0.22
HSPG2-212ENST00000493940 SLC44A3Q8N4M1 653 aa13.69□□□□□ -0.22
HSPG2-212ENST00000493940 CXorf38Q8TB03 319 aa13.69□□□□□ -0.22
HSPG2-212ENST00000493940 POMGNT1Q8WZA1 660 aa13.69□□□□□ -0.22
HSPG2-212ENST00000493940 ACCSQ96QU6 501 aa13.69□□□□□ -0.22
HSPG2-212ENST00000493940 TRIM9Q9C026 710 aa13.69□□□□□ -0.22
HSPG2-212ENST00000493940 BLZF1Q9H2G9 400 aa13.69□□□□□ -0.22
HSPG2-212ENST00000493940 DPP7Q9UHL4 492 aa13.69□□□□□ -0.22
HSPG2-212ENST00000493940 POLIQ9UNA4 740 aa13.69□□□□□ -0.22
HSPG2-212ENST00000493940 ANAPC1Q9H1A4 1944 aa13.68□□□□□ -0.22
HSPG2-212ENST00000493940 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.68□□□□□ -0.22
HSPG2-212ENST00000493940 ARHGEF37A1IGU5 675 aa13.68□□□□□ -0.22
HSPG2-212ENST00000493940 ANHXE9PGG2 379 aa13.68□□□□□ -0.22
HSPG2-212ENST00000493940 OAZ2O95190 189 aa13.68□□□□□ -0.22
HSPG2-212ENST00000493940 HNRNPA1P09651 372 aaKnown RBP eCLIP13.68□□□□□ -0.22
HSPG2-212ENST00000493940 ATF2P15336 505 aa13.68□□□□□ -0.22
HSPG2-212ENST00000493940 SCP2P22307 547 aa13.68□□□□□ -0.22
HSPG2-212ENST00000493940 FSHRP23945 695 aa13.68□□□□□ -0.22
HSPG2-212ENST00000493940 CCR2P41597 374 aa13.68□□□□□ -0.22
HSPG2-212ENST00000493940 EHHADHQ08426 723 aa13.68□□□□□ -0.22
HSPG2-212ENST00000493940 UVSSAQ2YD98 709 aa13.68□□□□□ -0.22
HSPG2-212ENST00000493940 RESP18Q5W5W9 173 aa13.68□□□□□ -0.22
HSPG2-212ENST00000493940 PARM1Q6UWI2 310 aa13.68□□□□□ -0.22
HSPG2-212ENST00000493940 EPM2AIP1Q7L775 607 aaPredicted RBP13.68□□□□□ -0.22
HSPG2-212ENST00000493940 HS6ST3Q8IZP7 471 aa13.68□□□□□ -0.22
HSPG2-212ENST00000493940 FGF14Q92915 247 aa13.68□□□□□ -0.22
HSPG2-212ENST00000493940 HVCN1Q96D96 273 aa13.68□□□□□ -0.22
HSPG2-212ENST00000493940 TCEAL4Q96EI5 215 aa13.68□□□□□ -0.22
HSPG2-212ENST00000493940 SENP8Q96LD8 212 aa13.68□□□□□ -0.22
HSPG2-212ENST00000493940 RTP3Q9BQQ7 232 aa13.68□□□□□ -0.22
HSPG2-212ENST00000493940 FAM213AQ9BRX8 229 aa13.68□□□□□ -0.22
HSPG2-212ENST00000493940 PTPRDP23468 1912 aa13.68□□□□□ -0.22
HSPG2-212ENST00000493940 TICRRQ7Z2Z1 1910 aa13.68□□□□□ -0.22
HSPG2-212ENST00000493940 PTPRJQ12913 1337 aa13.67□□□□□ -0.22
HSPG2-212ENST00000493940 KRBA1A5PL33 1030 aa13.67□□□□□ -0.22
HSPG2-212ENST00000493940 PI15O43692 258 aa13.67□□□□□ -0.22
HSPG2-212ENST00000493940 MOSPD3O75425 235 aa13.67□□□□□ -0.22
HSPG2-212ENST00000493940 HSP90AA1P07900 732 aaKnown RBP13.67□□□□□ -0.22
HSPG2-212ENST00000493940 AVPR2P30518 371 aa13.67□□□□□ -0.22
HSPG2-212ENST00000493940 HOXA9P31269 272 aa13.67□□□□□ -0.22
HSPG2-212ENST00000493940 TDGQ13569 410 aa13.67□□□□□ -0.22
HSPG2-212ENST00000493940 CUL4BQ13620 913 aa13.67□□□□□ -0.22
HSPG2-212ENST00000493940 HTR4Q13639 388 aa13.67□□□□□ -0.22
HSPG2-212ENST00000493940 TMEM132DQ14C87 1099 aa13.67□□□□□ -0.22
HSPG2-212ENST00000493940 KYAT1Q16773 422 aa13.67□□□□□ -0.22
HSPG2-212ENST00000493940 LIN9Q5TKA1 542 aa13.67□□□□□ -0.22
HSPG2-212ENST00000493940 SLFN12LQ6IEE8 588 aa13.67□□□□□ -0.22
HSPG2-212ENST00000493940 TCEAL8Q8IYN2 117 aa13.67□□□□□ -0.22
HSPG2-212ENST00000493940 UBALD2Q8IYN6 164 aa13.67□□□□□ -0.22
HSPG2-212ENST00000493940 TTC9BQ8N6N2 239 aa13.67□□□□□ -0.22
HSPG2-212ENST00000493940 TMEM105Q8N8V8 129 aa13.67□□□□□ -0.22
HSPG2-212ENST00000493940 BEST2Q8NFU1 509 aa13.67□□□□□ -0.22
HSPG2-212ENST00000493940 ING5Q8WYH8 240 aa13.67□□□□□ -0.22
HSPG2-212ENST00000493940 FGF13Q92913 245 aa13.67□□□□□ -0.22
HSPG2-212ENST00000493940 PGLYRP2Q96PD5 576 aa13.67□□□□□ -0.22
HSPG2-212ENST00000493940 C7orf25Q9BPX7 421 aa13.67□□□□□ -0.22
HSPG2-212ENST00000493940 PLA2G2FQ9BZM2 168 aa13.67□□□□□ -0.22
HSPG2-212ENST00000493940 TNMDQ9H2S6 317 aa13.67□□□□□ -0.22
HSPG2-212ENST00000493940 CYP4F11Q9HBI6 524 aa13.67□□□□□ -0.22
HSPG2-212ENST00000493940 DPP3Q9NY33 737 aa13.67□□□□□ -0.22
HSPG2-212ENST00000493940 CEP72Q9P209 647 aa13.67□□□□□ -0.22
HSPG2-212ENST00000493940 SERTAD1Q9UHV2 236 aa13.67□□□□□ -0.22
HSPG2-212ENST00000493940 DUSP12Q9UNI6 340 aa13.67□□□□□ -0.22
HSPG2-212ENST00000493940 TGFB1I1O43294 461 aa13.66□□□□□ -0.22
HSPG2-212ENST00000493940 KLRC4O43908 158 aa13.66□□□□□ -0.22
HSPG2-212ENST00000493940 SOAT2O75908 522 aa13.66□□□□□ -0.22
HSPG2-212ENST00000493940 RHOP08100 348 aa13.66□□□□□ -0.22
HSPG2-212ENST00000493940 YWHAHQ04917 246 aaPredicted RBP13.66□□□□□ -0.22
HSPG2-212ENST00000493940 ADCY1Q08828 1119 aa13.66□□□□□ -0.22
HSPG2-212ENST00000493940 PRSS36Q5K4E3 855 aa13.66□□□□□ -0.22
HSPG2-212ENST00000493940 LMBRD2Q68DH5 695 aaPredicted RBP13.66□□□□□ -0.22
HSPG2-212ENST00000493940 CNNM4Q6P4Q7 775 aa13.66□□□□□ -0.22
HSPG2-212ENST00000493940 DSTYKQ6XUX3 929 aa13.66□□□□□ -0.22
HSPG2-212ENST00000493940 LRRTM3Q86VH5 581 aa13.66□□□□□ -0.22
HSPG2-212ENST00000493940 CD302Q8IX05 232 aa13.66□□□□□ -0.22
HSPG2-212ENST00000493940 OR10T2Q8NGX3 314 aa13.66□□□□□ -0.22
HSPG2-212ENST00000493940 ZNF507Q8TCN5 953 aa13.66□□□□□ -0.22
HSPG2-212ENST00000493940 IRF2BPLQ9H1B7 796 aa13.66□□□□□ -0.22
HSPG2-212ENST00000493940 ASB7Q9H672 318 aa13.66□□□□□ -0.22
HSPG2-212ENST00000493940 PDE11AQ9HCR9 933 aa13.66□□□□□ -0.22
HSPG2-212ENST00000493940 CDH7Q9ULB5 785 aa13.66□□□□□ -0.22
HSPG2-212ENST00000493940 DERAQ9Y315 318 aa13.66□□□□□ -0.22
HSPG2-212ENST00000493940 PCDHB13Q9Y5F0 798 aa13.66□□□□□ -0.22
HSPG2-212ENST00000493940 NUMBLQ9Y6R0 609 aa13.66□□□□□ -0.22
HSPG2-212ENST00000493940 COL4A2P08572 1712 aa13.66□□□□□ -0.22
HSPG2-212ENST00000493940 A0A1B0GVL5 298 aa13.65□□□□□ -0.22
HSPG2-212ENST00000493940 H7C4K7 107 aa13.65□□□□□ -0.22
HSPG2-212ENST00000493940 ACTN4O43707 911 aaKnown RBP13.65□□□□□ -0.22
HSPG2-212ENST00000493940 CFHP08603 1231 aa13.65□□□□□ -0.22
HSPG2-212ENST00000493940 POU2F2P09086 479 aa13.65□□□□□ -0.22
HSPG2-212ENST00000493940 GJA1P17302 382 aa13.65□□□□□ -0.22
HSPG2-212ENST00000493940 CEBPBP17676 345 aa13.65□□□□□ -0.22
HSPG2-212ENST00000493940 GARTP22102 1010 aa13.65□□□□□ -0.22
HSPG2-212ENST00000493940 AFMP43652 599 aa13.65□□□□□ -0.22
HSPG2-212ENST00000493940 ME1P48163 572 aa13.65□□□□□ -0.22
HSPG2-212ENST00000493940 PABPC1LQ4VXU2 614 aaKnown RBP13.65□□□□□ -0.22
HSPG2-212ENST00000493940 CWF19L1Q69YN2 538 aaKnown RBP13.65□□□□□ -0.22
HSPG2-212ENST00000493940 ZNF280DQ6N043 979 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms