RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 CTXN3Q4LDR2 81 aa24.49■■□□□ 1.51
SNIP1-203ENST00000493916 ZDHHC14Q8IZN3 488 aa24.49■■□□□ 1.51
SNIP1-203ENST00000493916 ZNF461Q8TAF7 563 aa24.49■■□□□ 1.51
SNIP1-203ENST00000493916 OXCT2Q9BYC2 517 aaPredicted RBP24.49■■□□□ 1.51
SNIP1-203ENST00000493916 GOLPH3LQ9H4A5 285 aa24.49■■□□□ 1.51
SNIP1-203ENST00000493916 AGPAT3Q9NRZ7 376 aa24.49■■□□□ 1.51
SNIP1-203ENST00000493916 EXOC1Q9NV70 894 aa24.49■■□□□ 1.51
SNIP1-203ENST00000493916 HSPBP1Q9NZL4 362 aa24.49■■□□□ 1.51
SNIP1-203ENST00000493916 CLUHO75153 1309 aa24.49■■□□□ 1.51
SNIP1-203ENST00000493916 GPR37L1O60883 481 aa24.48■■□□□ 1.51
SNIP1-203ENST00000493916 TRIOO75962 3097 aa24.48■■□□□ 1.51
SNIP1-203ENST00000493916 ABLIM3O94929 683 aa24.48■■□□□ 1.51
SNIP1-203ENST00000493916 TYMPP19971 482 aa24.48■■□□□ 1.51
SNIP1-203ENST00000493916 YWHAHQ04917 246 aaPredicted RBP24.48■■□□□ 1.51
SNIP1-203ENST00000493916 PSMD2Q13200 908 aa24.48■■□□□ 1.51
SNIP1-203ENST00000493916 PPM1LQ5SGD2 360 aa24.48■■□□□ 1.51
SNIP1-203ENST00000493916 DSTYKQ6XUX3 929 aa24.48■■□□□ 1.51
SNIP1-203ENST00000493916 OTOP3Q7RTS5 596 aa24.48■■□□□ 1.51
SNIP1-203ENST00000493916 PLCD3Q8N3E9 789 aa24.48■■□□□ 1.51
SNIP1-203ENST00000493916 SLC7A14Q8TBB6 771 aa24.48■■□□□ 1.51
SNIP1-203ENST00000493916 KIAA1586Q9HCI6 787 aa24.48■■□□□ 1.51
SNIP1-203ENST00000493916 C11orf16Q9NQ32 467 aa24.48■■□□□ 1.51
SNIP1-203ENST00000493916 CGNQ9P2M7 1197 aaKnown RBP24.48■■□□□ 1.51
SNIP1-203ENST00000493916 WDR27A2RRH5 827 aa24.47■■□□□ 1.51
SNIP1-203ENST00000493916 SPTLC1O15269 473 aa24.47■■□□□ 1.51
SNIP1-203ENST00000493916 ODC1P11926 461 aa24.47■■□□□ 1.51
SNIP1-203ENST00000493916 KMT5BQ4FZB7 885 aa24.47■■□□□ 1.51
SNIP1-203ENST00000493916 TPGS2Q68CL5 300 aa24.47■■□□□ 1.51
SNIP1-203ENST00000493916 HS2ST1Q7LGA3 356 aa24.47■■□□□ 1.51
SNIP1-203ENST00000493916 NELFCDQ8IXH7 590 aa24.47■■□□□ 1.51
SNIP1-203ENST00000493916 ACSF2Q96CM8 615 aaPredicted RBP24.47■■□□□ 1.51
SNIP1-203ENST00000493916 PIDD1Q9HB75 910 aa24.47■■□□□ 1.51
SNIP1-203ENST00000493916 ARHGEF37A1IGU5 675 aa24.46■■□□□ 1.51
SNIP1-203ENST00000493916 ZNF233A6NK53 670 aa24.46■■□□□ 1.51
SNIP1-203ENST00000493916 XYLBO75191 536 aa24.46■■□□□ 1.51
SNIP1-203ENST00000493916 TFAMQ00059 246 aaKnown RBP24.46■■□□□ 1.51
SNIP1-203ENST00000493916 PTPN21Q16825 1174 aa24.46■■□□□ 1.51
SNIP1-203ENST00000493916 KNOP1Q1ED39 458 aaKnown RBP24.46■■□□□ 1.51
SNIP1-203ENST00000493916 TMEM31Q5JXX7 168 aa24.46■■□□□ 1.51
SNIP1-203ENST00000493916 KRBA2Q6ZNG9 492 aa24.46■■□□□ 1.51
SNIP1-203ENST00000493916 C12orf56Q8IXR9 622 aa24.46■■□□□ 1.51
SNIP1-203ENST00000493916 KIAA0895Q8NCT3 520 aa24.46■■□□□ 1.51
SNIP1-203ENST00000493916 NOC3LQ8WTT2 800 aaKnown RBP24.46■■□□□ 1.51
SNIP1-203ENST00000493916 CACTINQ8WUQ7 758 aaKnown RBP24.46■■□□□ 1.51
SNIP1-203ENST00000493916 SENP8Q96LD8 212 aa24.46■■□□□ 1.51
SNIP1-203ENST00000493916 ZNF560Q96MR9 790 aa24.46■■□□□ 1.51
SNIP1-203ENST00000493916 MAFFQ9ULX9 164 aa24.46■■□□□ 1.51
SNIP1-203ENST00000493916 TSC2P49815 1807 aa24.46■■□□□ 1.51
SNIP1-203ENST00000493916 ATF2P15336 505 aa24.45■■□□□ 1.5
SNIP1-203ENST00000493916 TAF6P49848 677 aa24.45■■□□□ 1.5
SNIP1-203ENST00000493916 STK4Q13043 487 aa24.45■■□□□ 1.5
SNIP1-203ENST00000493916 USP37Q86T82 979 aa24.45■■□□□ 1.5
SNIP1-203ENST00000493916 CBWD2Q8IUF1 395 aa24.45■■□□□ 1.5
SNIP1-203ENST00000493916 C1orf127Q8N9H9 656 aa24.45■■□□□ 1.5
SNIP1-203ENST00000493916 EDAQ92838 391 aa24.45■■□□□ 1.5
SNIP1-203ENST00000493916 PDE11AQ9HCR9 933 aa24.45■■□□□ 1.5
SNIP1-203ENST00000493916 TIMM13Q9Y5L4 95 aaPredicted RBP24.45■■□□□ 1.5
SNIP1-203ENST00000493916 OR6C75A6NL08 312 aa24.44■■□□□ 1.5
SNIP1-203ENST00000493916 ZNF202O95125 648 aa24.44■■□□□ 1.5
SNIP1-203ENST00000493916 RPN1P04843 607 aaKnown RBP24.44■■□□□ 1.5
SNIP1-203ENST00000493916 CYP11A1P05108 521 aa24.44■■□□□ 1.5
SNIP1-203ENST00000493916 PNPLA4P41247 253 aa24.44■■□□□ 1.5
SNIP1-203ENST00000493916 ARPP19P56211 112 aa24.44■■□□□ 1.5
SNIP1-203ENST00000493916 SURF1Q15526 300 aa24.44■■□□□ 1.5
SNIP1-203ENST00000493916 OVOS1Q6IE37 1185 aa24.44■■□□□ 1.5
SNIP1-203ENST00000493916 TCEAL8Q8IYN2 117 aa24.44■■□□□ 1.5
SNIP1-203ENST00000493916 GOLGA5Q8TBA6 731 aa24.44■■□□□ 1.5
SNIP1-203ENST00000493916 AFF4Q9UHB7 1163 aaKnown RBP24.44■■□□□ 1.5
SNIP1-203ENST00000493916 ITGA11Q9UKX5 1188 aa24.44■■□□□ 1.5
SNIP1-203ENST00000493916 DSEQ9UL01 958 aa24.44■■□□□ 1.5
SNIP1-203ENST00000493916 FAM86C2PA6NEL3 165 aa24.43■■□□□ 1.5
SNIP1-203ENST00000493916 CCL16O15467 120 aa24.43■■□□□ 1.5
SNIP1-203ENST00000493916 N4BP1O75113 896 aaKnown RBP24.43■■□□□ 1.5
SNIP1-203ENST00000493916 PRR29P0C7W0 189 aa24.43■■□□□ 1.5
SNIP1-203ENST00000493916 ELF1P32519 619 aa24.43■■□□□ 1.5
SNIP1-203ENST00000493916 ZXDAP98168 799 aa24.43■■□□□ 1.5
SNIP1-203ENST00000493916 DPYDQ12882 1025 aa24.43■■□□□ 1.5
SNIP1-203ENST00000493916 SNRNP35Q16560 246 aaKnown RBP24.43■■□□□ 1.5
SNIP1-203ENST00000493916 SV2CQ496J9 727 aa24.43■■□□□ 1.5
SNIP1-203ENST00000493916 XXYLT1Q8NBI6 393 aa24.43■■□□□ 1.5
SNIP1-203ENST00000493916 CXorf38Q8TB03 319 aa24.43■■□□□ 1.5
SNIP1-203ENST00000493916 BORCS6Q96GS4 357 aa24.43■■□□□ 1.5
SNIP1-203ENST00000493916 CIZ1Q9ULV3 898 aaPredicted RBP24.43■■□□□ 1.5
SNIP1-203ENST00000493916 CLIC2O15247 247 aa24.42■■□□□ 1.5
SNIP1-203ENST00000493916 RHOBTB3O94955 611 aa24.42■■□□□ 1.5
SNIP1-203ENST00000493916 ITGB3P05106 788 aa24.42■■□□□ 1.5
SNIP1-203ENST00000493916 CPB1P15086 417 aa24.42■■□□□ 1.5
SNIP1-203ENST00000493916 POLR2BP30876 1174 aaKnown RBP24.42■■□□□ 1.5
SNIP1-203ENST00000493916 CYP2J2P51589 502 aa24.42■■□□□ 1.5
SNIP1-203ENST00000493916 MYBPC2Q14324 1141 aa24.42■■□□□ 1.5
SNIP1-203ENST00000493916 LRRC52Q8N7C0 313 aa24.42■■□□□ 1.5
SNIP1-203ENST00000493916 TMEM174Q8WUU8 243 aa24.42■■□□□ 1.5
SNIP1-203ENST00000493916 CCDC47Q96A33 483 aaKnown RBP24.42■■□□□ 1.5
SNIP1-203ENST00000493916 CCDC34Q96HJ3 373 aa24.42■■□□□ 1.5
SNIP1-203ENST00000493916 LRFN3Q9BTN0 628 aa24.42■■□□□ 1.5
SNIP1-203ENST00000493916 MTMR12Q9C0I1 747 aa24.42■■□□□ 1.5
SNIP1-203ENST00000493916 INTS13Q9NVM9 706 aa24.42■■□□□ 1.5
SNIP1-203ENST00000493916 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.42■■□□□ 1.5
SNIP1-203ENST00000493916 EPS15L1Q9UBC2 864 aa24.42■■□□□ 1.5
SNIP1-203ENST00000493916 PTPRJQ12913 1337 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms