RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 SPATA20Q8TB22 786 aa13.26□□□□□ -0.29
UPF3A-210ENST00000493727 DEPTORQ8TB45 409 aa13.26□□□□□ -0.29
UPF3A-210ENST00000493727 HELQQ8TDG4 1101 aa13.26□□□□□ -0.29
UPF3A-210ENST00000493727 TMEM169Q96HH4 297 aa13.26□□□□□ -0.29
UPF3A-210ENST00000493727 FDXACB1Q9BRP7 624 aaPredicted RBP13.26□□□□□ -0.29
UPF3A-210ENST00000493727 IRF2BPLQ9H1B7 796 aa13.26□□□□□ -0.29
UPF3A-210ENST00000493727 SLC39A2Q9NP94 309 aa13.26□□□□□ -0.29
UPF3A-210ENST00000493727 ZNF358Q9NW07 568 aa13.26□□□□□ -0.29
UPF3A-210ENST00000493727 STK39Q9UEW8 545 aa13.26□□□□□ -0.29
UPF3A-210ENST00000493727 PIN4Q9Y237 131 aaKnown RBP13.26□□□□□ -0.29
UPF3A-210ENST00000493727 DMXL1Q9Y485 3027 aa13.26□□□□□ -0.29
UPF3A-210ENST00000493727 LRRIQ4A6NIV6 560 aa13.25□□□□□ -0.29
UPF3A-210ENST00000493727 ZNF623O75123 536 aa13.25□□□□□ -0.29
UPF3A-210ENST00000493727 KIF20AO95235 890 aa13.25□□□□□ -0.29
UPF3A-210ENST00000493727 FGFR4P22455 802 aa13.25□□□□□ -0.29
UPF3A-210ENST00000493727 ZNF131P52739 623 aa13.25□□□□□ -0.29
UPF3A-210ENST00000493727 MORC3Q14149 939 aa13.25□□□□□ -0.29
UPF3A-210ENST00000493727 TFDP1Q14186 410 aa13.25□□□□□ -0.29
UPF3A-210ENST00000493727 MXD4Q14582 209 aaPredicted RBP13.25□□□□□ -0.29
UPF3A-210ENST00000493727 CRTC2Q53ET0 693 aaPredicted RBP13.25□□□□□ -0.29
UPF3A-210ENST00000493727 SRGAP1Q7Z6B7 1085 aa13.25□□□□□ -0.29
UPF3A-210ENST00000493727 DAW1Q8N136 415 aa13.25□□□□□ -0.29
UPF3A-210ENST00000493727 TPCN2Q8NHX9 752 aa13.25□□□□□ -0.29
UPF3A-210ENST00000493727 ASAP3Q8TDY4 903 aa13.25□□□□□ -0.29
UPF3A-210ENST00000493727 ATOH1Q92858 354 aaPredicted RBP13.25□□□□□ -0.29
UPF3A-210ENST00000493727 HPS3Q969F9 1004 aa13.25□□□□□ -0.29
UPF3A-210ENST00000493727 ZNF775Q96BV0 537 aaPredicted RBP13.25□□□□□ -0.29
UPF3A-210ENST00000493727 PGBD4Q96DM1 585 aa13.25□□□□□ -0.29
UPF3A-210ENST00000493727 RIPOR3Q96MK2 946 aa13.25□□□□□ -0.29
UPF3A-210ENST00000493727 NLRP4Q96MN2 994 aa13.25□□□□□ -0.29
UPF3A-210ENST00000493727 C17orf75Q9HAS0 396 aa13.25□□□□□ -0.29
UPF3A-210ENST00000493727 KMT5AQ9NQR1 393 aa13.25□□□□□ -0.29
UPF3A-210ENST00000493727 FAM105AQ9NUU6 356 aa13.25□□□□□ -0.29
UPF3A-210ENST00000493727 CDH22Q9UJ99 828 aa13.25□□□□□ -0.29
UPF3A-210ENST00000493727 GDAQ9Y2T3 454 aa13.25□□□□□ -0.29
UPF3A-210ENST00000493727 ZNF292O60281 2723 aa13.24□□□□□ -0.29
UPF3A-210ENST00000493727 HIDE1A8MVS5 230 aa13.24□□□□□ -0.29
UPF3A-210ENST00000493727 H0Y858 1186 aa13.24□□□□□ -0.29
UPF3A-210ENST00000493727 H0YCG3 227 aa13.24□□□□□ -0.29
UPF3A-210ENST00000493727 ASAP2O43150 1006 aa13.24□□□□□ -0.29
UPF3A-210ENST00000493727 GLRA2P23416 452 aa13.24□□□□□ -0.29
UPF3A-210ENST00000493727 ARL2P36404 184 aa13.24□□□□□ -0.29
UPF3A-210ENST00000493727 NAMPTP43490 491 aa13.24□□□□□ -0.29
UPF3A-210ENST00000493727 NPTX2P47972 431 aa13.24□□□□□ -0.29
UPF3A-210ENST00000493727 BCAR1P56945 870 aa13.24□□□□□ -0.29
UPF3A-210ENST00000493727 ZNF445P59923 1031 aa13.24□□□□□ -0.29
UPF3A-210ENST00000493727 PTSQ03393 145 aa13.24□□□□□ -0.29
UPF3A-210ENST00000493727 LAMTOR4Q0VGL1 99 aa13.24□□□□□ -0.29
UPF3A-210ENST00000493727 KLHL10Q6JEL2 608 aa13.24□□□□□ -0.29
UPF3A-210ENST00000493727 CES5AQ6NT32 575 aa13.24□□□□□ -0.29
UPF3A-210ENST00000493727 LRSAM1Q6UWE0 723 aa13.24□□□□□ -0.29
UPF3A-210ENST00000493727 ZBTB8OSQ8IWT0 167 aa13.24□□□□□ -0.29
UPF3A-210ENST00000493727 SMYD4Q8IYR2 804 aaPredicted RBP13.24□□□□□ -0.29
UPF3A-210ENST00000493727 MRPL43Q8N983 215 aaKnown RBP13.24□□□□□ -0.29
UPF3A-210ENST00000493727 PRPF31Q8WWY3 499 aaKnown RBP13.24□□□□□ -0.29
UPF3A-210ENST00000493727 BSNDQ8WZ55 320 aa13.24□□□□□ -0.29
UPF3A-210ENST00000493727 NECTIN4Q96NY8 510 aa13.24□□□□□ -0.29
UPF3A-210ENST00000493727 TSPY26PQ9H489 355 aa13.24□□□□□ -0.29
UPF3A-210ENST00000493727 OLFML3Q9NRN5 406 aa13.24□□□□□ -0.29
UPF3A-210ENST00000493727 AGPAT5Q9NUQ2 364 aa13.24□□□□□ -0.29
UPF3A-210ENST00000493727 NR2E1Q9Y466 385 aa13.24□□□□□ -0.29
UPF3A-210ENST00000493727 TDRD15B5MCY1 1934 aaKnown RBP13.23□□□□□ -0.29
UPF3A-210ENST00000493727 CNTNAP2Q9UHC6 1331 aa13.23□□□□□ -0.29
UPF3A-210ENST00000493727 C2orf71A6NGG8 1288 aa13.23□□□□□ -0.29
UPF3A-210ENST00000493727 SLC16A4O15374 487 aa13.23□□□□□ -0.29
UPF3A-210ENST00000493727 ZC3H11AO75152 810 aaKnown RBP eCLIP13.23□□□□□ -0.29
UPF3A-210ENST00000493727 CSDE1O75534 798 aaKnown RBP13.23□□□□□ -0.29
UPF3A-210ENST00000493727 SRGAP2CP0DJJ0 459 aa13.23□□□□□ -0.29
UPF3A-210ENST00000493727 MAPTP10636 758 aaKnown RBP13.23□□□□□ -0.29
UPF3A-210ENST00000493727 SCP2P22307 547 aa13.23□□□□□ -0.29
UPF3A-210ENST00000493727 SP100P23497 879 aaPredicted RBP13.23□□□□□ -0.29
UPF3A-210ENST00000493727 NMT1P30419 496 aaKnown RBP13.23□□□□□ -0.29
UPF3A-210ENST00000493727 ABCD1P33897 745 aa13.23□□□□□ -0.29
UPF3A-210ENST00000493727 PBX3P40426 434 aa13.23□□□□□ -0.29
UPF3A-210ENST00000493727 PPP1R2P41236 205 aa13.23□□□□□ -0.29
UPF3A-210ENST00000493727 RNASELQ05823 741 aaKnown RBP13.23□□□□□ -0.29
UPF3A-210ENST00000493727 ITIH3Q06033 890 aa13.23□□□□□ -0.29
UPF3A-210ENST00000493727 EHHADHQ08426 723 aa13.23□□□□□ -0.29
UPF3A-210ENST00000493727 STK4Q13043 487 aa13.23□□□□□ -0.29
UPF3A-210ENST00000493727 ALCAMQ13740 583 aa13.23□□□□□ -0.29
UPF3A-210ENST00000493727 CAPSQ13938 189 aa13.23□□□□□ -0.29
UPF3A-210ENST00000493727 PCBP1Q15365 356 aaKnown RBP eCLIP13.23□□□□□ -0.29
UPF3A-210ENST00000493727 TLR1Q15399 786 aa13.23□□□□□ -0.29
UPF3A-210ENST00000493727 DPCR1Q3MIW9 517 aa13.23□□□□□ -0.29
UPF3A-210ENST00000493727 ANO6Q4KMQ2 910 aa13.23□□□□□ -0.29
UPF3A-210ENST00000493727 NOMO2Q5JPE7 1267 aa13.23□□□□□ -0.29
UPF3A-210ENST00000493727 ASCL5Q7RTU5 278 aa13.23□□□□□ -0.29
UPF3A-210ENST00000493727 MLKLQ8NB16 471 aa13.23□□□□□ -0.29
UPF3A-210ENST00000493727 RNF149Q8NC42 400 aa13.23□□□□□ -0.29
UPF3A-210ENST00000493727 KIAA0895Q8NCT3 520 aa13.23□□□□□ -0.29
UPF3A-210ENST00000493727 KREMEN2Q8NCW0 462 aa13.23□□□□□ -0.29
UPF3A-210ENST00000493727 URGCPQ8TCY9 931 aa13.23□□□□□ -0.29
UPF3A-210ENST00000493727 KIFC3Q9BVG8 833 aa13.23□□□□□ -0.29
UPF3A-210ENST00000493727 NAT10Q9H0A0 1025 aaKnown RBP13.23□□□□□ -0.29
UPF3A-210ENST00000493727 IFT122Q9HBG6 1241 aa13.23□□□□□ -0.29
UPF3A-210ENST00000493727 DZANK1Q9NVP4 752 aa13.23□□□□□ -0.29
UPF3A-210ENST00000493727 KANSL3Q9P2N6 904 aa13.23□□□□□ -0.29
UPF3A-210ENST00000493727 SORCS3Q9UPU3 1222 aa13.23□□□□□ -0.29
UPF3A-210ENST00000493727 MAPK8IP1Q9UQF2 711 aa13.23□□□□□ -0.29
UPF3A-210ENST00000493727 IRAK3Q9Y616 596 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms