RNA–Protein interactions for RNA: ENST00000493613.5

NUDCD3-210, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-210ENST00000493613 ARSHQ5FYA8 562 aa11.18□□□□□ -0.62
NUDCD3-210ENST00000493613 ARL6IP4Q66PJ3 421 aaKnown RBP11.18□□□□□ -0.62
NUDCD3-210ENST00000493613 HAUS6Q7Z4H7 955 aa11.18□□□□□ -0.62
NUDCD3-210ENST00000493613 HS6ST3Q8IZP7 471 aa11.18□□□□□ -0.62
NUDCD3-210ENST00000493613 TMEM130Q8N3G9 435 aa11.18□□□□□ -0.62
NUDCD3-210ENST00000493613 RUBCNQ92622 972 aa11.18□□□□□ -0.62
NUDCD3-210ENST00000493613 CLDN23Q96B33 292 aa11.18□□□□□ -0.62
NUDCD3-210ENST00000493613 KIF12Q96FN5 646 aa11.18□□□□□ -0.62
NUDCD3-210ENST00000493613 ASB16Q96NS5 453 aa11.18□□□□□ -0.62
NUDCD3-210ENST00000493613 REEP2Q9BRK0 252 aa11.18□□□□□ -0.62
NUDCD3-210ENST00000493613 TRMT61BQ9BVS5 477 aaKnown RBP11.18□□□□□ -0.62
NUDCD3-210ENST00000493613 ASAH2Q9NR71 780 aa11.18□□□□□ -0.62
NUDCD3-210ENST00000493613 CEP72Q9P209 647 aa11.18□□□□□ -0.62
NUDCD3-210ENST00000493613 ODF2LQ9ULJ1 636 aa11.18□□□□□ -0.62
NUDCD3-210ENST00000493613 UBQLN1Q9UMX0 589 aaKnown RBP11.18□□□□□ -0.62
NUDCD3-210ENST00000493613 MRPS17Q9Y2R5 130 aaKnown RBP11.18□□□□□ -0.62
NUDCD3-210ENST00000493613 TIMM13Q9Y5L4 95 aaPredicted RBP11.18□□□□□ -0.62
NUDCD3-210ENST00000493613 NRG2O14511 850 aaPredicted RBP11.17□□□□□ -0.62
NUDCD3-210ENST00000493613 XPOTO43592 962 aaKnown RBP11.17□□□□□ -0.62
NUDCD3-210ENST00000493613 OAZ2O95190 189 aa11.17□□□□□ -0.62
NUDCD3-210ENST00000493613 CD2BP2O95400 341 aaKnown RBP11.17□□□□□ -0.62
NUDCD3-210ENST00000493613 GJA1P17302 382 aa11.17□□□□□ -0.62
NUDCD3-210ENST00000493613 PSMC3P17980 439 aa11.17□□□□□ -0.62
NUDCD3-210ENST00000493613 LRPAP1P30533 357 aa11.17□□□□□ -0.62
NUDCD3-210ENST00000493613 DHX8Q14562 1220 aaKnown RBP11.17□□□□□ -0.62
NUDCD3-210ENST00000493613 ZBTB6Q15916 424 aa11.17□□□□□ -0.62
NUDCD3-210ENST00000493613 USP37Q86T82 979 aa11.17□□□□□ -0.62
NUDCD3-210ENST00000493613 GPBP1Q86WP2 473 aa11.17□□□□□ -0.62
NUDCD3-210ENST00000493613 DCLK2Q8N568 766 aa11.17□□□□□ -0.62
NUDCD3-210ENST00000493613 SUMF1Q8NBK3 374 aa11.17□□□□□ -0.62
NUDCD3-210ENST00000493613 LEMD2Q8NC56 503 aa11.17□□□□□ -0.62
NUDCD3-210ENST00000493613 ATRIPQ8WXE1 791 aa11.17□□□□□ -0.62
NUDCD3-210ENST00000493613 SMARCD2Q92925 531 aa11.17□□□□□ -0.62
NUDCD3-210ENST00000493613 IRF7Q92985 503 aa11.17□□□□□ -0.62
NUDCD3-210ENST00000493613 CALML4Q96GE6 196 aa11.17□□□□□ -0.62
NUDCD3-210ENST00000493613 BORCS6Q96GS4 357 aa11.17□□□□□ -0.62
NUDCD3-210ENST00000493613 AK8Q96MA6 479 aa11.17□□□□□ -0.62
NUDCD3-210ENST00000493613 ZSWIM3Q96MP5 696 aa11.17□□□□□ -0.62
NUDCD3-210ENST00000493613 PGLYRP2Q96PD5 576 aa11.17□□□□□ -0.62
NUDCD3-210ENST00000493613 OXCT2Q9BYC2 517 aaPredicted RBP11.17□□□□□ -0.62
NUDCD3-210ENST00000493613 TBX20Q9UMR3 447 aa11.17□□□□□ -0.62
NUDCD3-210ENST00000493613 NDRG2Q9UN36 371 aaKnown RBP11.17□□□□□ -0.62
NUDCD3-210ENST00000493613 SMC3Q9UQE7 1217 aa11.17□□□□□ -0.62
NUDCD3-210ENST00000493613 YIPF1Q9Y548 306 aa11.17□□□□□ -0.62
NUDCD3-210ENST00000493613 PCDHGA2Q9Y5H1 932 aa11.17□□□□□ -0.62
NUDCD3-210ENST00000493613 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.17□□□□□ -0.62
NUDCD3-210ENST00000493613 HELZP42694 1942 aaKnown RBP11.17□□□□□ -0.62
NUDCD3-210ENST00000493613 MYO16Q9Y6X6 1858 aa11.17□□□□□ -0.62
NUDCD3-210ENST00000493613 SHISA7A6NL88 538 aa11.16□□□□□ -0.62
NUDCD3-210ENST00000493613 LACTBL1A8MY62 500 aa11.16□□□□□ -0.62
NUDCD3-210ENST00000493613 K7ENM7 598 aa11.16□□□□□ -0.62
NUDCD3-210ENST00000493613 MAN2B1O00754 1011 aa11.16□□□□□ -0.62
NUDCD3-210ENST00000493613 SPTLC1O15269 473 aa11.16□□□□□ -0.62
NUDCD3-210ENST00000493613 OGTO15294 1046 aa11.16□□□□□ -0.62
NUDCD3-210ENST00000493613 MOSPD3O75425 235 aa11.16□□□□□ -0.62
NUDCD3-210ENST00000493613 FAM13AO94988 1023 aa11.16□□□□□ -0.62
NUDCD3-210ENST00000493613 OR4Q2P0C623 313 aa11.16□□□□□ -0.62
NUDCD3-210ENST00000493613 CYP3A5P20815 502 aa11.16□□□□□ -0.62
NUDCD3-210ENST00000493613 SCP2P22307 547 aa11.16□□□□□ -0.62
NUDCD3-210ENST00000493613 GDI1P31150 447 aa11.16□□□□□ -0.62
NUDCD3-210ENST00000493613 UBA7P41226 1012 aa11.16□□□□□ -0.62
NUDCD3-210ENST00000493613 VIPR2P41587 438 aa11.16□□□□□ -0.62
NUDCD3-210ENST00000493613 AARSP49588 968 aaKnown RBP eCLIP11.16□□□□□ -0.62
NUDCD3-210ENST00000493613 GUCY2FP51841 1108 aa11.16□□□□□ -0.62
NUDCD3-210ENST00000493613 EPHA5P54756 1037 aa11.16□□□□□ -0.62
NUDCD3-210ENST00000493613 FZD5Q13467 585 aa11.16□□□□□ -0.62
NUDCD3-210ENST00000493613 ENOX2Q16206 610 aaKnown RBP11.16□□□□□ -0.62
NUDCD3-210ENST00000493613 KYAT1Q16773 422 aa11.16□□□□□ -0.62
NUDCD3-210ENST00000493613 TSSK4Q6SA08 328 aa11.16□□□□□ -0.62
NUDCD3-210ENST00000493613 VITQ6UXI7 678 aa11.16□□□□□ -0.62
NUDCD3-210ENST00000493613 DSTYKQ6XUX3 929 aa11.16□□□□□ -0.62
NUDCD3-210ENST00000493613 MAP4K3Q8IVH8 894 aa11.16□□□□□ -0.62
NUDCD3-210ENST00000493613 MYCT1Q8N699 235 aa11.16□□□□□ -0.62
NUDCD3-210ENST00000493613 BEST2Q8NFU1 509 aa11.16□□□□□ -0.62
NUDCD3-210ENST00000493613 ZSCAN18Q8TBC5 510 aaPredicted RBP11.16□□□□□ -0.62
NUDCD3-210ENST00000493613 RMDN1Q96DB5 314 aa11.16□□□□□ -0.62
NUDCD3-210ENST00000493613 SLITRK6Q9H5Y7 841 aa11.16□□□□□ -0.62
NUDCD3-210ENST00000493613 RPF1Q9H9Y2 349 aaKnown RBP11.16□□□□□ -0.62
NUDCD3-210ENST00000493613 UPF2Q9HAU5 1272 aaKnown RBP11.16□□□□□ -0.62
NUDCD3-210ENST00000493613 ZNF334Q9HCZ1 680 aaPredicted RBP11.16□□□□□ -0.62
NUDCD3-210ENST00000493613 NCDNQ9UBB6 729 aa11.16□□□□□ -0.62
NUDCD3-210ENST00000493613 KIAA1549LQ6ZVL6 1849 aa11.16□□□□□ -0.62
NUDCD3-210ENST00000493613 EML5Q05BV3 1969 aa11.16□□□□□ -0.62
NUDCD3-210ENST00000493613 GREB1Q4ZG55 1949 aa11.15□□□□□ -0.62
NUDCD3-210ENST00000493613 ANAPC1Q9H1A4 1944 aa11.15□□□□□ -0.62
NUDCD3-210ENST00000493613 OR6C75A6NL08 312 aa11.15□□□□□ -0.62
NUDCD3-210ENST00000493613 SLC26A4O43511 780 aa11.15□□□□□ -0.62
NUDCD3-210ENST00000493613 TRAK2O60296 914 aa11.15□□□□□ -0.62
NUDCD3-210ENST00000493613 FAM189A1O60320 539 aa11.15□□□□□ -0.62
NUDCD3-210ENST00000493613 VNN2O95498 520 aa11.15□□□□□ -0.62
NUDCD3-210ENST00000493613 PIGRP01833 764 aa11.15□□□□□ -0.62
NUDCD3-210ENST00000493613 KRT18P05783 430 aaKnown RBP11.15□□□□□ -0.62
NUDCD3-210ENST00000493613 ALDH1A3P47895 512 aa11.15□□□□□ -0.62
NUDCD3-210ENST00000493613 DUSP4Q13115 394 aa11.15□□□□□ -0.62
NUDCD3-210ENST00000493613 MTAPQ13126 283 aa11.15□□□□□ -0.62
NUDCD3-210ENST00000493613 GPR17Q13304 367 aa11.15□□□□□ -0.62
NUDCD3-210ENST00000493613 PLD1Q13393 1074 aa11.15□□□□□ -0.62
NUDCD3-210ENST00000493613 TEAD2Q15562 447 aa11.15□□□□□ -0.62
NUDCD3-210ENST00000493613 LARP1BQ659C4 914 aaKnown RBP11.15□□□□□ -0.62
NUDCD3-210ENST00000493613 OVOS1Q6IE37 1185 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms