RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 POLMQ9NP87 494 aaPredicted RBP7.39□□□□□ -1.23
VPS52-219ENST00000493379 FAM105AQ9NUU6 356 aa7.39□□□□□ -1.23
VPS52-219ENST00000493379 ZDHHC3Q9NYG2 299 aa7.39□□□□□ -1.23
VPS52-219ENST00000493379 GINS2Q9Y248 185 aa7.39□□□□□ -1.23
VPS52-219ENST00000493379 TNFSF13BQ9Y275 285 aa7.39□□□□□ -1.23
VPS52-219ENST00000493379 R4GN57 208 aa7.39□□□□□ -1.23
VPS52-219ENST00000493379 NPHP3-ACAD11A0A0J9YXS1 232 aa7.38□□□□□ -1.23
VPS52-219ENST00000493379 DENND3A2RUS2 1198 aa7.38□□□□□ -1.23
VPS52-219ENST00000493379 INO80B-WBP1J3KQ70 363 aa7.38□□□□□ -1.23
VPS52-219ENST00000493379 KLRC4O43908 158 aa7.38□□□□□ -1.23
VPS52-219ENST00000493379 UPP2O95045 317 aa7.38□□□□□ -1.23
VPS52-219ENST00000493379 ZNF202O95125 648 aa7.38□□□□□ -1.23
VPS52-219ENST00000493379 EDN1P05305 212 aa7.38□□□□□ -1.23
VPS52-219ENST00000493379 ADRB2P07550 413 aa7.38□□□□□ -1.23
VPS52-219ENST00000493379 PFKFB1P16118 471 aa7.38□□□□□ -1.23
VPS52-219ENST00000493379 GAP43P17677 238 aa7.38□□□□□ -1.23
VPS52-219ENST00000493379 FGFR4P22455 802 aa7.38□□□□□ -1.23
VPS52-219ENST00000493379 STAT6P42226 847 aa7.38□□□□□ -1.23
VPS52-219ENST00000493379 NDUFA8P51970 172 aa7.38□□□□□ -1.23
VPS52-219ENST00000493379 PEX3P56589 373 aa7.38□□□□□ -1.23
VPS52-219ENST00000493379 ERVK-21P61565 698 aa7.38□□□□□ -1.23
VPS52-219ENST00000493379 NCBP1Q09161 790 aaKnown RBP7.38□□□□□ -1.23
VPS52-219ENST00000493379 DMP1Q13316 513 aaPredicted RBP7.38□□□□□ -1.23
VPS52-219ENST00000493379 FOXD4L6Q3SYB3 417 aaPredicted RBP7.38□□□□□ -1.23
VPS52-219ENST00000493379 LONRF3Q496Y0 759 aa7.38□□□□□ -1.23
VPS52-219ENST00000493379 XKR4Q5GH76 650 aa7.38□□□□□ -1.23
VPS52-219ENST00000493379 SLC27A1Q6PCB7 646 aa7.38□□□□□ -1.23
VPS52-219ENST00000493379 ALKAL1Q6UXT8 129 aa7.38□□□□□ -1.23
VPS52-219ENST00000493379 FOXD4L3Q6VB84 417 aaPredicted RBP7.38□□□□□ -1.23
VPS52-219ENST00000493379 AGMOQ6ZNB7 445 aa7.38□□□□□ -1.23
VPS52-219ENST00000493379 MAEAQ7L5Y9 396 aa7.38□□□□□ -1.23
VPS52-219ENST00000493379 HAUS6Q7Z4H7 955 aa7.38□□□□□ -1.23
VPS52-219ENST00000493379 ZBTB8OSQ8IWT0 167 aa7.38□□□□□ -1.23
VPS52-219ENST00000493379 CMTR2Q8IYT2 770 aaKnown RBP7.38□□□□□ -1.23
VPS52-219ENST00000493379 GSTCDQ8NEC7 633 aa7.38□□□□□ -1.23
VPS52-219ENST00000493379 DEPTORQ8TB45 409 aa7.38□□□□□ -1.23
VPS52-219ENST00000493379 MRPS27Q92552 414 aaKnown RBP7.38□□□□□ -1.23
VPS52-219ENST00000493379 HVCN1Q96D96 273 aa7.38□□□□□ -1.23
VPS52-219ENST00000493379 PAGE5Q96GU1 130 aa7.38□□□□□ -1.23
VPS52-219ENST00000493379 ZNF668Q96K58 619 aaPredicted RBP7.38□□□□□ -1.23
VPS52-219ENST00000493379 PPP1R16BQ96T49 567 aa7.38□□□□□ -1.23
VPS52-219ENST00000493379 PANK2Q9BZ23 570 aa7.38□□□□□ -1.23
VPS52-219ENST00000493379 POLD4Q9HCU8 107 aa7.38□□□□□ -1.23
VPS52-219ENST00000493379 UBN1Q9NPG3 1134 aa7.38□□□□□ -1.23
VPS52-219ENST00000493379 KMT5AQ9NQR1 393 aa7.38□□□□□ -1.23
VPS52-219ENST00000493379 PCDHB7Q9Y5E2 793 aa7.38□□□□□ -1.23
VPS52-219ENST00000493379 PCDHB2Q9Y5E7 798 aa7.38□□□□□ -1.23
VPS52-219ENST00000493379 ITPR1Q14643 2758 aa7.37□□□□□ -1.23
VPS52-219ENST00000493379 TENM4Q6N022 2769 aa7.37□□□□□ -1.23
VPS52-219ENST00000493379 CNOT1A5YKK6 2376 aaKnown RBP7.37□□□□□ -1.23
VPS52-219ENST00000493379 ARID2Q68CP9 1835 aa7.37□□□□□ -1.23
VPS52-219ENST00000493379 A0A1B0GVL5 298 aa7.37□□□□□ -1.23
VPS52-219ENST00000493379 LINC01553A4QN01 128 aa7.37□□□□□ -1.23
VPS52-219ENST00000493379 LRRIQ4A6NIV6 560 aa7.37□□□□□ -1.23
VPS52-219ENST00000493379 N4BP3O15049 544 aa7.37□□□□□ -1.23
VPS52-219ENST00000493379 B4GALT5O43286 388 aa7.37□□□□□ -1.23
VPS52-219ENST00000493379 OFD1O75665 1012 aa7.37□□□□□ -1.23
VPS52-219ENST00000493379 TOM1L1O75674 476 aa7.37□□□□□ -1.23
VPS52-219ENST00000493379 ERLIN2O94905 339 aa7.37□□□□□ -1.23
VPS52-219ENST00000493379 EFEMP2O95967 443 aa7.37□□□□□ -1.23
VPS52-219ENST00000493379 PRKCBP05771 671 aa7.37□□□□□ -1.23
VPS52-219ENST00000493379 RB1P06400 928 aa7.37□□□□□ -1.23
VPS52-219ENST00000493379 BMPR1AP36894 532 aa7.37□□□□□ -1.23
VPS52-219ENST00000493379 SYKP43405 635 aa7.37□□□□□ -1.23
VPS52-219ENST00000493379 MAPK8P45983 427 aa7.37□□□□□ -1.23
VPS52-219ENST00000493379 RING1Q06587 406 aa7.37□□□□□ -1.23
VPS52-219ENST00000493379 MCL1Q07820 350 aa7.37□□□□□ -1.23
VPS52-219ENST00000493379 PSMD2Q13200 908 aa7.37□□□□□ -1.23
VPS52-219ENST00000493379 ALCAMQ13740 583 aa7.37□□□□□ -1.23
VPS52-219ENST00000493379 ZRSR1Q15695 479 aaKnown RBP7.37□□□□□ -1.23
VPS52-219ENST00000493379 KANK3Q6NY19 840 aa7.37□□□□□ -1.23
VPS52-219ENST00000493379 KRBA2Q6ZNG9 492 aa7.37□□□□□ -1.23
VPS52-219ENST00000493379 PRR23BQ6ZRT6 265 aa7.37□□□□□ -1.23
VPS52-219ENST00000493379 LRRC55Q6ZSA7 311 aa7.37□□□□□ -1.23
VPS52-219ENST00000493379 UNC13DQ70J99 1090 aa7.37□□□□□ -1.23
VPS52-219ENST00000493379 EPM2AIP1Q7L775 607 aaPredicted RBP7.37□□□□□ -1.23
VPS52-219ENST00000493379 MAP4K3Q8IVH8 894 aa7.37□□□□□ -1.23
VPS52-219ENST00000493379 MYOCDQ8IZQ8 938 aa7.37□□□□□ -1.23
VPS52-219ENST00000493379 MYCT1Q8N699 235 aa7.37□□□□□ -1.23
VPS52-219ENST00000493379 PDILTQ8N807 584 aa7.37□□□□□ -1.23
VPS52-219ENST00000493379 ZNF507Q8TCN5 953 aa7.37□□□□□ -1.23
VPS52-219ENST00000493379 P2RX5Q93086 422 aa7.37□□□□□ -1.23
VPS52-219ENST00000493379 DHX58Q96C10 678 aa7.37□□□□□ -1.23
VPS52-219ENST00000493379 PGBD4Q96DM1 585 aa7.37□□□□□ -1.23
VPS52-219ENST00000493379 SAMD11Q96NU1 681 aa7.37□□□□□ -1.23
VPS52-219ENST00000493379 PLVAPQ9BX97 442 aa7.37□□□□□ -1.23
VPS52-219ENST00000493379 TMEM117Q9H0C3 514 aa7.37□□□□□ -1.23
VPS52-219ENST00000493379 GOLPH3LQ9H4A5 285 aa7.37□□□□□ -1.23
VPS52-219ENST00000493379 PDZD7Q9H5P4 517 aa7.37□□□□□ -1.23
VPS52-219ENST00000493379 CWH43Q9H720 699 aa7.37□□□□□ -1.23
VPS52-219ENST00000493379 KANSL3Q9P2N6 904 aa7.37□□□□□ -1.23
VPS52-219ENST00000493379 TBX20Q9UMR3 447 aa7.37□□□□□ -1.23
VPS52-219ENST00000493379 PIN4Q9Y237 131 aaKnown RBP7.37□□□□□ -1.23
VPS52-219ENST00000493379 GIT1Q9Y2X7 761 aa7.37□□□□□ -1.23
VPS52-219ENST00000493379 IGSF10Q6WRI0 2623 aa7.37□□□□□ -1.23
VPS52-219ENST00000493379 MICAL3Q7RTP6 2002 aa7.37□□□□□ -1.23
VPS52-219ENST00000493379 LOXHD1Q8IVV2 1947 aa7.37□□□□□ -1.23
VPS52-219ENST00000493379 MYH15Q9Y2K3 1946 aa7.37□□□□□ -1.23
VPS52-219ENST00000493379 PTPN13Q12923 2485 aa7.36□□□□□ -1.23
VPS52-219ENST00000493379 A0A0B4J269 797 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms