RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 KCNT2Q6UVM3 1135 aa18.51■□□□□ 0.55
LIME1-208ENST00000493265 C15orf39Q6ZRI6 1047 aa18.51■□□□□ 0.55
LIME1-208ENST00000493265 APTXQ7Z2E3 356 aaKnown RBP18.51■□□□□ 0.55
LIME1-208ENST00000493265 COLGALT1Q8NBJ5 622 aa18.51■□□□□ 0.55
LIME1-208ENST00000493265 FBXL13Q8NEE6 735 aa18.51■□□□□ 0.55
LIME1-208ENST00000493265 SP7Q8TDD2 431 aaPredicted RBP18.51■□□□□ 0.55
LIME1-208ENST00000493265 SEMA4DQ92854 862 aa18.51■□□□□ 0.55
LIME1-208ENST00000493265 DDX27Q96GQ7 796 aaKnown RBP18.51■□□□□ 0.55
LIME1-208ENST00000493265 UROC1Q96N76 676 aa18.51■□□□□ 0.55
LIME1-208ENST00000493265 ZNF558Q96NG5 402 aa18.51■□□□□ 0.55
LIME1-208ENST00000493265 NAP1L5Q96NT1 182 aaPredicted RBP18.51■□□□□ 0.55
LIME1-208ENST00000493265 NUB1Q9Y5A7 615 aa18.51■□□□□ 0.55
LIME1-208ENST00000493265 LINC01553A4QN01 128 aa18.5■□□□□ 0.55
LIME1-208ENST00000493265 LGALS16A8MUM7 142 aa18.5■□□□□ 0.55
LIME1-208ENST00000493265 TADA2AO75478 443 aa18.5■□□□□ 0.55
LIME1-208ENST00000493265 B3GAT3O94766 335 aa18.5■□□□□ 0.55
LIME1-208ENST00000493265 KIF4AO95239 1232 aa18.5■□□□□ 0.55
LIME1-208ENST00000493265 LAG3P18627 525 aa18.5■□□□□ 0.55
LIME1-208ENST00000493265 POU3F3P20264 500 aaPredicted RBP18.5■□□□□ 0.55
LIME1-208ENST00000493265 LRPAP1P30533 357 aa18.5■□□□□ 0.55
LIME1-208ENST00000493265 UBASH3AP57075 661 aa18.5■□□□□ 0.55
LIME1-208ENST00000493265 MCCD1P59942 119 aaPredicted RBP18.5■□□□□ 0.55
LIME1-208ENST00000493265 CETN1Q12798 172 aa18.5■□□□□ 0.55
LIME1-208ENST00000493265 LRMPQ12912 555 aa18.5■□□□□ 0.55
LIME1-208ENST00000493265 C3orf58Q8NDZ4 430 aa18.5■□□□□ 0.55
LIME1-208ENST00000493265 HPDLQ96IR7 371 aa18.5■□□□□ 0.55
LIME1-208ENST00000493265 PCMTD1Q96MG8 357 aaPredicted RBP18.5■□□□□ 0.55
LIME1-208ENST00000493265 TMEM175Q9BSA9 504 aa18.5■□□□□ 0.55
LIME1-208ENST00000493265 COLEC11Q9BWP8 271 aa18.5■□□□□ 0.55
LIME1-208ENST00000493265 GCNT4Q9P109 453 aa18.5■□□□□ 0.55
LIME1-208ENST00000493265 ANO9A1A5B4 782 aa18.49■□□□□ 0.55
LIME1-208ENST00000493265 LRRC10BA6NIK2 292 aa18.49■□□□□ 0.55
LIME1-208ENST00000493265 I3L4J1 428 aa18.49■□□□□ 0.55
LIME1-208ENST00000493265 PIRO00625 290 aa18.49■□□□□ 0.55
LIME1-208ENST00000493265 TEX33O43247 280 aa18.49■□□□□ 0.55
LIME1-208ENST00000493265 ITGB1P05556 798 aa18.49■□□□□ 0.55
LIME1-208ENST00000493265 CTNNB1P35222 781 aa18.49■□□□□ 0.55
LIME1-208ENST00000493265 ZNF699Q32M78 642 aa18.49■□□□□ 0.55
LIME1-208ENST00000493265 SPOPLQ6IQ16 392 aa18.49■□□□□ 0.55
LIME1-208ENST00000493265 DCLRE1AQ6PJP8 1040 aa18.49■□□□□ 0.55
LIME1-208ENST00000493265 GBP6Q6ZN66 633 aa18.49■□□□□ 0.55
LIME1-208ENST00000493265 CCDC150Q8NCX0 1101 aa18.49■□□□□ 0.55
LIME1-208ENST00000493265 CXorf38Q8TB03 319 aa18.49■□□□□ 0.55
LIME1-208ENST00000493265 ZNF560Q96MR9 790 aa18.49■□□□□ 0.55
LIME1-208ENST00000493265 C17orf80Q9BSJ5 609 aa18.49■□□□□ 0.55
LIME1-208ENST00000493265 INTS2Q9H0H0 1204 aaKnown RBP18.49■□□□□ 0.55
LIME1-208ENST00000493265 AAASQ9NRG9 546 aa18.49■□□□□ 0.55
LIME1-208ENST00000493265 RAB20Q9NX57 234 aa18.49■□□□□ 0.55
LIME1-208ENST00000493265 NXF1Q9UBU9 619 aaKnown RBP18.49■□□□□ 0.55
LIME1-208ENST00000493265 PCDHB12Q9Y5F1 795 aa18.49■□□□□ 0.55
LIME1-208ENST00000493265 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.49■□□□□ 0.55
LIME1-208ENST00000493265 KIAA1671Q9BY89 1806 aa18.49■□□□□ 0.55
LIME1-208ENST00000493265 GOLGA6L3A6NEY3 463 aa18.48■□□□□ 0.55
LIME1-208ENST00000493265 SPTLC1O15269 473 aa18.48■□□□□ 0.55
LIME1-208ENST00000493265 SLC9A1P19634 815 aa18.48■□□□□ 0.55
LIME1-208ENST00000493265 BRCC3P46736 316 aa18.48■□□□□ 0.55
LIME1-208ENST00000493265 TAF6P49848 677 aa18.48■□□□□ 0.55
LIME1-208ENST00000493265 MYO1EQ12965 1108 aa18.48■□□□□ 0.55
LIME1-208ENST00000493265 SV2CQ496J9 727 aa18.48■□□□□ 0.55
LIME1-208ENST00000493265 EPC2Q52LR7 807 aa18.48■□□□□ 0.55
LIME1-208ENST00000493265 WDR44Q5JSH3 913 aa18.48■□□□□ 0.55
LIME1-208ENST00000493265 DSTYKQ6XUX3 929 aa18.48■□□□□ 0.55
LIME1-208ENST00000493265 TMEM173Q86WV6 379 aaPredicted RBP18.48■□□□□ 0.55
LIME1-208ENST00000493265 BCL7CQ8WUZ0 217 aaPredicted RBP18.48■□□□□ 0.55
LIME1-208ENST00000493265 IMPG2Q9BZV3 1241 aa18.48■□□□□ 0.55
LIME1-208ENST00000493265 XPO4Q9C0E2 1151 aaKnown RBP18.48■□□□□ 0.55
LIME1-208ENST00000493265 RTN4Q9NQC3 1192 aaKnown RBP18.48■□□□□ 0.55
LIME1-208ENST00000493265 SPG21Q9NZD8 308 aa18.48■□□□□ 0.55
LIME1-208ENST00000493265 A0A1B0GTH6 734 aa18.47■□□□□ 0.55
LIME1-208ENST00000493265 P4HA2O15460 535 aa18.47■□□□□ 0.55
LIME1-208ENST00000493265 AP5Z1O43299 807 aa18.47■□□□□ 0.55
LIME1-208ENST00000493265 KLK7P49862 253 aa18.47■□□□□ 0.55
LIME1-208ENST00000493265 LILRA4P59901 499 aa18.47■□□□□ 0.55
LIME1-208ENST00000493265 APBA1Q02410 837 aa18.47■□□□□ 0.55
LIME1-208ENST00000493265 EXOC3L4Q17RC7 722 aa18.47■□□□□ 0.55
LIME1-208ENST00000493265 SGSM1Q2NKQ1 1148 aa18.47■□□□□ 0.55
LIME1-208ENST00000493265 SCARA5Q6ZMJ2 495 aa18.47■□□□□ 0.55
LIME1-208ENST00000493265 LRRC52Q8N7C0 313 aa18.47■□□□□ 0.55
LIME1-208ENST00000493265 EHBP1Q8NDI1 1231 aa18.47■□□□□ 0.55
LIME1-208ENST00000493265 GDPD5Q8WTR4 605 aa18.47■□□□□ 0.55
LIME1-208ENST00000493265 LSM14BQ9BX40 385 aaKnown RBP18.47■□□□□ 0.55
LIME1-208ENST00000493265 TRIM5Q9C035 493 aa18.47■□□□□ 0.55
LIME1-208ENST00000493265 MARCH5Q9NX47 278 aa18.47■□□□□ 0.55
LIME1-208ENST00000493265 ADAM28Q9UKQ2 775 aa18.47■□□□□ 0.55
LIME1-208ENST00000493265 POLIQ9UNA4 740 aa18.47■□□□□ 0.55
LIME1-208ENST00000493265 COG5Q9UP83 839 aa18.47■□□□□ 0.55
LIME1-208ENST00000493265 KPNA7A9QM74 516 aa18.46■□□□□ 0.55
LIME1-208ENST00000493265 CSPG5O95196 566 aa18.46■□□□□ 0.55
LIME1-208ENST00000493265 ATICP31939 592 aa18.46■□□□□ 0.55
LIME1-208ENST00000493265 BMPR1AP36894 532 aa18.46■□□□□ 0.55
LIME1-208ENST00000493265 PNPLA4P41247 253 aa18.46■□□□□ 0.55
LIME1-208ENST00000493265 TNNC1P63316 161 aa18.46■□□□□ 0.55
LIME1-208ENST00000493265 NOP14P78316 857 aaKnown RBP18.46■□□□□ 0.55
LIME1-208ENST00000493265 SYCP1Q15431 976 aa18.46■□□□□ 0.55
LIME1-208ENST00000493265 UVSSAQ2YD98 709 aa18.46■□□□□ 0.55
LIME1-208ENST00000493265 WDR72Q3MJ13 1102 aa18.46■□□□□ 0.55
LIME1-208ENST00000493265 ZNF667Q5HYK9 610 aa18.46■□□□□ 0.55
LIME1-208ENST00000493265 CD300LGQ6UXG3 332 aa18.46■□□□□ 0.55
LIME1-208ENST00000493265 SLC39A11Q8N1S5 342 aa18.46■□□□□ 0.55
LIME1-208ENST00000493265 CLP1Q92989 425 aaKnown RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms