RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 RPS3AP61247 264 aaKnown RBP10.24□□□□□ -0.77
VPS8-225ENST00000492449 SNRNP48Q6IEG0 339 aaKnown RBP10.24□□□□□ -0.77
VPS8-225ENST00000492449 RWDD4Q6NW29 188 aaKnown RBP10.24□□□□□ -0.77
VPS8-225ENST00000492449 ELMSAN1Q6PJG2 1045 aa10.24□□□□□ -0.77
VPS8-225ENST00000492449 TMC7Q7Z402 723 aa10.24□□□□□ -0.77
VPS8-225ENST00000492449 NLRX1Q86UT6 975 aa10.24□□□□□ -0.77
VPS8-225ENST00000492449 ZNF276Q8N554 614 aa10.24□□□□□ -0.77
VPS8-225ENST00000492449 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.24□□□□□ -0.77
VPS8-225ENST00000492449 SNF8Q96H20 258 aa10.24□□□□□ -0.77
VPS8-225ENST00000492449 LBHD1Q9BQE6 289 aaPredicted RBP10.24□□□□□ -0.77
VPS8-225ENST00000492449 TRIM55Q9BYV6 548 aa10.24□□□□□ -0.77
VPS8-225ENST00000492449 TUT1Q9H6E5 874 aaKnown RBP10.24□□□□□ -0.77
VPS8-225ENST00000492449 BLOC1S4Q9NUP1 217 aa10.24□□□□□ -0.77
VPS8-225ENST00000492449 SELENONQ9NZV5 590 aa10.24□□□□□ -0.77
VPS8-225ENST00000492449 SLC7A8Q9UHI5 535 aa10.24□□□□□ -0.77
VPS8-225ENST00000492449 MTUS1Q9ULD2 1270 aa10.24□□□□□ -0.77
VPS8-225ENST00000492449 TRIM17Q9Y577 477 aa10.24□□□□□ -0.77
VPS8-225ENST00000492449 COL1A1P02452 1464 aaPredicted RBP10.24□□□□□ -0.77
VPS8-225ENST00000492449 BAG2O95816 211 aa10.23□□□□□ -0.77
VPS8-225ENST00000492449 LMNB1P20700 586 aa10.23□□□□□ -0.77
VPS8-225ENST00000492449 IVDP26440 423 aa10.23□□□□□ -0.77
VPS8-225ENST00000492449 GCAP28676 217 aa10.23□□□□□ -0.77
VPS8-225ENST00000492449 RXRGP48443 463 aa10.23□□□□□ -0.77
VPS8-225ENST00000492449 FOLH1Q04609 750 aa10.23□□□□□ -0.77
VPS8-225ENST00000492449 PDAP1Q13442 181 aaKnown RBP10.23□□□□□ -0.77
VPS8-225ENST00000492449 KRT81Q14533 505 aa10.23□□□□□ -0.77
VPS8-225ENST00000492449 C16orf87Q6PH81 154 aa10.23□□□□□ -0.77
VPS8-225ENST00000492449 POTEHQ6S545 545 aa10.23□□□□□ -0.77
VPS8-225ENST00000492449 DNAAF5Q86Y56 855 aa10.23□□□□□ -0.77
VPS8-225ENST00000492449 CCDC105Q8IYK2 499 aa10.23□□□□□ -0.77
VPS8-225ENST00000492449 ZCRB1Q8TBF4 217 aaKnown RBP10.23□□□□□ -0.77
VPS8-225ENST00000492449 MORC4Q8TE76 937 aa10.23□□□□□ -0.77
VPS8-225ENST00000492449 U2AF1L4Q8WU68 220 aaKnown RBP10.23□□□□□ -0.77
VPS8-225ENST00000492449 ZSWIM1Q9BR11 485 aa10.23□□□□□ -0.77
VPS8-225ENST00000492449 MRPL46Q9H2W6 279 aaKnown RBP10.23□□□□□ -0.77
VPS8-225ENST00000492449 PPCSQ9HAB8 311 aa10.23□□□□□ -0.77
VPS8-225ENST00000492449 DKC1O60832 514 aaKnown RBP eCLIP10.23□□□□□ -0.77
VPS8-225ENST00000492449 BAIAP3O94812 1187 aa10.23□□□□□ -0.77
VPS8-225ENST00000492449 LDHAP00338 332 aaKnown RBP10.23□□□□□ -0.77
VPS8-225ENST00000492449 CHRNB2P17787 502 aa10.23□□□□□ -0.77
VPS8-225ENST00000492449 RPA3P35244 121 aaPredicted RBP10.23□□□□□ -0.77
VPS8-225ENST00000492449 PTK6Q13882 451 aa10.23□□□□□ -0.77
VPS8-225ENST00000492449 SLC1A5Q15758 541 aa10.23□□□□□ -0.77
VPS8-225ENST00000492449 NIPAL1Q6NVV3 410 aa10.23□□□□□ -0.77
VPS8-225ENST00000492449 DCLRE1AQ6PJP8 1040 aa10.23□□□□□ -0.77
VPS8-225ENST00000492449 RNF111Q6ZNA4 994 aa10.23□□□□□ -0.77
VPS8-225ENST00000492449 PEX5LQ8IYB4 626 aa10.23□□□□□ -0.77
VPS8-225ENST00000492449 ANKK1Q8NFD2 765 aa10.23□□□□□ -0.77
VPS8-225ENST00000492449 TTLL11Q8NHH1 800 aa10.23□□□□□ -0.77
VPS8-225ENST00000492449 LNX1Q8TBB1 728 aaPredicted RBP10.23□□□□□ -0.77
VPS8-225ENST00000492449 SYT11Q9BT88 431 aa10.23□□□□□ -0.77
VPS8-225ENST00000492449 UNKQ9C0B0 810 aaKnown RBP10.23□□□□□ -0.77
VPS8-225ENST00000492449 DRC3Q9H069 523 aa10.23□□□□□ -0.77
VPS8-225ENST00000492449 TRABDQ9H4I3 376 aa10.23□□□□□ -0.77
VPS8-225ENST00000492449 RSL24D1Q9UHA3 163 aaKnown RBP10.23□□□□□ -0.77
VPS8-225ENST00000492449 TBK1Q9UHD2 729 aa10.23□□□□□ -0.77
VPS8-225ENST00000492449 RAB26Q9ULW5 256 aa10.23□□□□□ -0.77
VPS8-225ENST00000492449 IGSF9BQ9UPX0 1349 aa10.23□□□□□ -0.77
VPS8-225ENST00000492449 CCDC160A6NGH7 325 aa10.23□□□□□ -0.77
VPS8-225ENST00000492449 TTLL13PA6NNM8 815 aa10.23□□□□□ -0.77
VPS8-225ENST00000492449 SPECC1L-ADORA2AF8WAN1 911 aa10.23□□□□□ -0.77
VPS8-225ENST00000492449 TRAF5O00463 557 aa10.23□□□□□ -0.77
VPS8-225ENST00000492449 SPTLC1O15269 473 aa10.23□□□□□ -0.77
VPS8-225ENST00000492449 OR52Z1P0C646 297 aa10.23□□□□□ -0.77
VPS8-225ENST00000492449 VDRP11473 427 aa10.23□□□□□ -0.77
VPS8-225ENST00000492449 NUP107P57740 925 aa10.23□□□□□ -0.77
VPS8-225ENST00000492449 KCNH2Q12809 1159 aa10.23□□□□□ -0.77
VPS8-225ENST00000492449 TMED2Q15363 201 aa10.23□□□□□ -0.77
VPS8-225ENST00000492449 MAPK6Q16659 721 aa10.23□□□□□ -0.77
VPS8-225ENST00000492449 IFIT1BQ5T764 474 aaKnown RBP10.23□□□□□ -0.77
VPS8-225ENST00000492449 DCDC5Q6ZRR9 648 aa10.23□□□□□ -0.77
VPS8-225ENST00000492449 NGDNQ8NEJ9 315 aaKnown RBP10.23□□□□□ -0.77
VPS8-225ENST00000492449 JADE3Q92613 823 aa10.23□□□□□ -0.77
VPS8-225ENST00000492449 EME1Q96AY2 570 aa10.23□□□□□ -0.77
VPS8-225ENST00000492449 CALML4Q96GE6 196 aa10.23□□□□□ -0.77
VPS8-225ENST00000492449 CDK5RAP3Q96JB5 506 aa10.23□□□□□ -0.77
VPS8-225ENST00000492449 GRIP2Q9C0E4 1043 aa10.23□□□□□ -0.77
VPS8-225ENST00000492449 Q9H521 79 aa10.23□□□□□ -0.77
VPS8-225ENST00000492449 PPP1R1BQ9UD71 204 aaPredicted RBP10.23□□□□□ -0.77
VPS8-225ENST00000492449 SUGT1Q9Y2Z0 365 aa10.23□□□□□ -0.77
VPS8-225ENST00000492449 LAMB2P55268 1798 aa10.22□□□□□ -0.77
VPS8-225ENST00000492449 ITM2AO43736 263 aa10.22□□□□□ -0.77
VPS8-225ENST00000492449 PON1P27169 355 aa10.22□□□□□ -0.77
VPS8-225ENST00000492449 FDFT1P37268 417 aa10.22□□□□□ -0.77
VPS8-225ENST00000492449 ORC2Q13416 577 aaPredicted RBP10.22□□□□□ -0.77
VPS8-225ENST00000492449 NDUFA5Q16718 116 aa10.22□□□□□ -0.77
VPS8-225ENST00000492449 OGFRL1Q5TC84 451 aaPredicted RBP10.22□□□□□ -0.77
VPS8-225ENST00000492449 SEL1L2Q5TEA6 688 aa10.22□□□□□ -0.77
VPS8-225ENST00000492449 NOP9Q86U38 636 aaKnown RBP10.22□□□□□ -0.77
VPS8-225ENST00000492449 ICA1LQ8NDH6 482 aa10.22□□□□□ -0.77
VPS8-225ENST00000492449 GDPD5Q8WTR4 605 aa10.22□□□□□ -0.77
VPS8-225ENST00000492449 MTBPQ96DY7 904 aa10.22□□□□□ -0.77
VPS8-225ENST00000492449 FHDC1Q9C0D6 1143 aaPredicted RBP10.22□□□□□ -0.77
VPS8-225ENST00000492449 KLC2Q9H0B6 622 aa10.22□□□□□ -0.77
VPS8-225ENST00000492449 ADAMTS6Q9UKP5 1117 aa10.22□□□□□ -0.77
VPS8-225ENST00000492449 MYH14Q7Z406 1995 aaKnown RBP10.22□□□□□ -0.77
VPS8-225ENST00000492449 CCDC194A0A1B0GVG4 234 aa10.22□□□□□ -0.77
VPS8-225ENST00000492449 B2RBV5 119 aa10.22□□□□□ -0.77
VPS8-225ENST00000492449 SNRPA1P09661 255 aaKnown RBP10.22□□□□□ -0.77
VPS8-225ENST00000492449 HOXD11P31277 338 aaPredicted RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 240.4 ms