RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 R4GN57 208 aa9.95□□□□□ -0.82
HDAC3-212ENST00000492407 DOCK8Q8NF50 2099 aa9.95□□□□□ -0.82
HDAC3-212ENST00000492407 FAM186AA6NE01 2351 aa9.95□□□□□ -0.82
HDAC3-212ENST00000492407 GVINP1Q7Z2Y8 2422 aa9.94□□□□□ -0.82
HDAC3-212ENST00000492407 PP2D1A8MPX8 630 aa9.94□□□□□ -0.82
HDAC3-212ENST00000492407 MEFVO15553 781 aaPredicted RBP9.94□□□□□ -0.82
HDAC3-212ENST00000492407 LILRB5O75023 590 aa9.94□□□□□ -0.82
HDAC3-212ENST00000492407 SEC24AO95486 1093 aa9.94□□□□□ -0.82
HDAC3-212ENST00000492407 BMP15O95972 392 aa9.94□□□□□ -0.82
HDAC3-212ENST00000492407 PLA2G4BP0C869 781 aa9.94□□□□□ -0.82
HDAC3-212ENST00000492407 CEBPBP17676 345 aa9.94□□□□□ -0.82
HDAC3-212ENST00000492407 PSMC3P17980 439 aa9.94□□□□□ -0.82
HDAC3-212ENST00000492407 TYMPP19971 482 aa9.94□□□□□ -0.82
HDAC3-212ENST00000492407 WEE1P30291 646 aa9.94□□□□□ -0.82
HDAC3-212ENST00000492407 CDC25AP30304 524 aa9.94□□□□□ -0.82
HDAC3-212ENST00000492407 MCM2P49736 904 aa9.94□□□□□ -0.82
HDAC3-212ENST00000492407 YWHAHQ04917 246 aaPredicted RBP9.94□□□□□ -0.82
HDAC3-212ENST00000492407 GPR17Q13304 367 aa9.94□□□□□ -0.82
HDAC3-212ENST00000492407 FZD5Q13467 585 aa9.94□□□□□ -0.82
HDAC3-212ENST00000492407 MYBPC2Q14324 1141 aa9.94□□□□□ -0.82
HDAC3-212ENST00000492407 PUM1Q14671 1186 aaKnown RBP eCLIP9.94□□□□□ -0.82
HDAC3-212ENST00000492407 PPP2R5DQ14738 602 aa9.94□□□□□ -0.82
HDAC3-212ENST00000492407 TMEM119Q4V9L6 283 aa9.94□□□□□ -0.82
HDAC3-212ENST00000492407 FAM78AQ5JUQ0 283 aa9.94□□□□□ -0.82
HDAC3-212ENST00000492407 TPRG1Q6ZUI0 275 aa9.94□□□□□ -0.82
HDAC3-212ENST00000492407 HAUS6Q7Z4H7 955 aa9.94□□□□□ -0.82
HDAC3-212ENST00000492407 MFSD6LQ8IWD5 586 aa9.94□□□□□ -0.82
HDAC3-212ENST00000492407 ZNF687Q8N1G0 1237 aa9.94□□□□□ -0.82
HDAC3-212ENST00000492407 GPATCH11Q8N954 259 aa9.94□□□□□ -0.82
HDAC3-212ENST00000492407 ING5Q8WYH8 240 aa9.94□□□□□ -0.82
HDAC3-212ENST00000492407 C18orf25Q96B23 403 aaPredicted RBP9.94□□□□□ -0.82
HDAC3-212ENST00000492407 CDK5RAP3Q96JB5 506 aa9.94□□□□□ -0.82
HDAC3-212ENST00000492407 EPC1Q9H2F5 836 aa9.94□□□□□ -0.82
HDAC3-212ENST00000492407 BRD9Q9H8M2 597 aa9.94□□□□□ -0.82
HDAC3-212ENST00000492407 PRMT8Q9NR22 394 aaPredicted RBP9.94□□□□□ -0.82
HDAC3-212ENST00000492407 ASAH2Q9NR71 780 aa9.94□□□□□ -0.82
HDAC3-212ENST00000492407 DERAQ9Y315 318 aa9.94□□□□□ -0.82
HDAC3-212ENST00000492407 MTF2Q9Y483 593 aaPredicted RBP9.94□□□□□ -0.82
HDAC3-212ENST00000492407 SFI1A8K8P3 1242 aa9.93□□□□□ -0.82
HDAC3-212ENST00000492407 OGTO15294 1046 aa9.93□□□□□ -0.82
HDAC3-212ENST00000492407 ZNF131P52739 623 aa9.93□□□□□ -0.82
HDAC3-212ENST00000492407 EPHB3P54753 998 aa9.93□□□□□ -0.82
HDAC3-212ENST00000492407 ARPP19P56211 112 aa9.93□□□□□ -0.82
HDAC3-212ENST00000492407 CSTF1Q05048 431 aaKnown RBP9.93□□□□□ -0.82
HDAC3-212ENST00000492407 PPP2R3AQ06190 1150 aa9.93□□□□□ -0.82
HDAC3-212ENST00000492407 TWF1Q12792 350 aa9.93□□□□□ -0.82
HDAC3-212ENST00000492407 SMARCB1Q12824 385 aa9.93□□□□□ -0.82
HDAC3-212ENST00000492407 ARSHQ5FYA8 562 aa9.93□□□□□ -0.82
HDAC3-212ENST00000492407 USP37Q86T82 979 aa9.93□□□□□ -0.82
HDAC3-212ENST00000492407 CALML4Q96GE6 196 aa9.93□□□□□ -0.82
HDAC3-212ENST00000492407 ZBTB45Q96K62 511 aaPredicted RBP9.93□□□□□ -0.82
HDAC3-212ENST00000492407 PLA2G2FQ9BZM2 168 aa9.93□□□□□ -0.82
HDAC3-212ENST00000492407 CHRDQ9H2X0 955 aa9.93□□□□□ -0.82
HDAC3-212ENST00000492407 ST6GALNAC4Q9H4F1 302 aa9.93□□□□□ -0.82
HDAC3-212ENST00000492407 ZNF334Q9HCZ1 680 aaPredicted RBP9.93□□□□□ -0.82
HDAC3-212ENST00000492407 OBP2AQ9NY56 170 aa9.93□□□□□ -0.82
HDAC3-212ENST00000492407 DLL3Q9NYJ7 618 aa9.93□□□□□ -0.82
HDAC3-212ENST00000492407 CEP72Q9P209 647 aa9.93□□□□□ -0.82
HDAC3-212ENST00000492407 ANKFY1Q9P2R3 1169 aa9.93□□□□□ -0.82
HDAC3-212ENST00000492407 ZMYM5Q9UJ78 669 aa9.93□□□□□ -0.82
HDAC3-212ENST00000492407 A0A0B4J269 797 aa9.92□□□□□ -0.82
HDAC3-212ENST00000492407 VWA3AA6NCI4 1184 aa9.92□□□□□ -0.82
HDAC3-212ENST00000492407 SHISA7A6NL88 538 aa9.92□□□□□ -0.82
HDAC3-212ENST00000492407 SOBPA7XYQ1 873 aa9.92□□□□□ -0.82
HDAC3-212ENST00000492407 PRR5-ARHGAP8B1AHC4 643 aa9.92□□□□□ -0.82
HDAC3-212ENST00000492407 FAM189A1O60320 539 aa9.92□□□□□ -0.82
HDAC3-212ENST00000492407 LRRN2O75325 713 aa9.92□□□□□ -0.82
HDAC3-212ENST00000492407 MOSPD3O75425 235 aa9.92□□□□□ -0.82
HDAC3-212ENST00000492407 CXCL8P10145 99 aa9.92□□□□□ -0.82
HDAC3-212ENST00000492407 HARSP12081 509 aaKnown RBP9.92□□□□□ -0.82
HDAC3-212ENST00000492407 CPB1P15086 417 aa9.92□□□□□ -0.82
HDAC3-212ENST00000492407 TARSP26639 723 aaKnown RBP9.92□□□□□ -0.82
HDAC3-212ENST00000492407 LONP1P36776 959 aaKnown RBP9.92□□□□□ -0.82
HDAC3-212ENST00000492407 UBA7P41226 1012 aa9.92□□□□□ -0.82
HDAC3-212ENST00000492407 CCR2P41597 374 aa9.92□□□□□ -0.82
HDAC3-212ENST00000492407 MATR3P43243 847 aaKnown RBP eCLIP9.92□□□□□ -0.82
HDAC3-212ENST00000492407 ALDH1A3P47895 512 aa9.92□□□□□ -0.82
HDAC3-212ENST00000492407 LIG4P49917 911 aa9.92□□□□□ -0.82
HDAC3-212ENST00000492407 ARHGAP8P85298 464 aa9.92□□□□□ -0.82
HDAC3-212ENST00000492407 SPATA1Q5VX52 437 aa9.92□□□□□ -0.82
HDAC3-212ENST00000492407 MCTP1Q6DN14 999 aa9.92□□□□□ -0.82
HDAC3-212ENST00000492407 SLFN12LQ6IEE8 588 aa9.92□□□□□ -0.82
HDAC3-212ENST00000492407 CENPPQ6IPU0 288 aa9.92□□□□□ -0.82
HDAC3-212ENST00000492407 POTEHQ6S545 545 aa9.92□□□□□ -0.82
HDAC3-212ENST00000492407 RNF19BQ6ZMZ0 732 aa9.92□□□□□ -0.82
HDAC3-212ENST00000492407 KIAA2013Q8IYS2 634 aa9.92□□□□□ -0.82
HDAC3-212ENST00000492407 CELF5Q8N6W0 485 aaKnown RBP9.92□□□□□ -0.82
HDAC3-212ENST00000492407 ST13P5Q8NFI4 369 aaPredicted RBP9.92□□□□□ -0.82
HDAC3-212ENST00000492407 C2orf15Q8WU43 125 aaKnown RBP9.92□□□□□ -0.82
HDAC3-212ENST00000492407 FAM3CQ92520 227 aa9.92□□□□□ -0.82
HDAC3-212ENST00000492407 TCEAL4Q96EI5 215 aa9.92□□□□□ -0.82
HDAC3-212ENST00000492407 KIF12Q96FN5 646 aa9.92□□□□□ -0.82
HDAC3-212ENST00000492407 BICD1Q96G01 975 aa9.92□□□□□ -0.82
HDAC3-212ENST00000492407 LRRC3Q9BY71 257 aa9.92□□□□□ -0.82
HDAC3-212ENST00000492407 ASB7Q9H672 318 aa9.92□□□□□ -0.82
HDAC3-212ENST00000492407 C8orf33Q9H7E9 229 aaPredicted RBP9.92□□□□□ -0.82
HDAC3-212ENST00000492407 RPF1Q9H9Y2 349 aaKnown RBP9.92□□□□□ -0.82
HDAC3-212ENST00000492407 PARVGQ9HBI0 331 aa9.92□□□□□ -0.82
HDAC3-212ENST00000492407 HEBP1Q9NRV9 189 aa9.92□□□□□ -0.82
HDAC3-212ENST00000492407 DSEQ9UL01 958 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms