RNA–Protein interactions for RNA: ENST00000492390.5

CDK11A-220, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 3

Gene CDK11A, Length 976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-220ENST00000492390 CEP72Q9P209 647 aa17.16■□□□□ 0.34
CDK11A-220ENST00000492390 SYN3O14994 580 aa17.15■□□□□ 0.34
CDK11A-220ENST00000492390 PRKCBP05771 671 aa17.15■□□□□ 0.34
CDK11A-220ENST00000492390 CSRP1P21291 193 aaKnown RBP17.15■□□□□ 0.34
CDK11A-220ENST00000492390 PXNP49023 591 aaPredicted RBP17.15■□□□□ 0.34
CDK11A-220ENST00000492390 TWF1Q12792 350 aa17.15■□□□□ 0.34
CDK11A-220ENST00000492390 TMEM132AQ24JP5 1023 aa17.15■□□□□ 0.34
CDK11A-220ENST00000492390 PLK5Q496M5 336 aa17.15■□□□□ 0.34
CDK11A-220ENST00000492390 SH3PXD2AQ5TCZ1 1133 aa17.15■□□□□ 0.34
CDK11A-220ENST00000492390 HAUS6Q7Z4H7 955 aa17.15■□□□□ 0.34
CDK11A-220ENST00000492390 NEK8Q86SG6 692 aa17.15■□□□□ 0.34
CDK11A-220ENST00000492390 C3orf58Q8NDZ4 430 aa17.15■□□□□ 0.34
CDK11A-220ENST00000492390 CCDC43Q96MW1 224 aaKnown RBP17.15■□□□□ 0.34
CDK11A-220ENST00000492390 NAP1L4Q99733 375 aaKnown RBP17.15■□□□□ 0.34
CDK11A-220ENST00000492390 SCNM1Q9BWG6 230 aa17.15■□□□□ 0.34
CDK11A-220ENST00000492390 AFF4Q9UHB7 1163 aaKnown RBP17.15■□□□□ 0.34
CDK11A-220ENST00000492390 CIZ1Q9ULV3 898 aaPredicted RBP17.15■□□□□ 0.34
CDK11A-220ENST00000492390 GDAQ9Y2T3 454 aa17.15■□□□□ 0.34
CDK11A-220ENST00000492390 TTLL13PA6NNM8 815 aa17.14■□□□□ 0.33
CDK11A-220ENST00000492390 TAF4O00268 1085 aa17.14■□□□□ 0.33
CDK11A-220ENST00000492390 ATG13O75143 517 aa17.14■□□□□ 0.33
CDK11A-220ENST00000492390 RARRES1P49788 294 aa17.14■□□□□ 0.33
CDK11A-220ENST00000492390 PRPF4BQ13523 1007 aaKnown RBP17.14■□□□□ 0.33
CDK11A-220ENST00000492390 MRPL58Q14197 206 aaKnown RBP17.14■□□□□ 0.33
CDK11A-220ENST00000492390 ARHGAP29Q52LW3 1261 aa17.14■□□□□ 0.33
CDK11A-220ENST00000492390 GLRA4Q5JXX5 417 aa17.14■□□□□ 0.33
CDK11A-220ENST00000492390 SLFN12Q8IYM2 578 aa17.14■□□□□ 0.33
CDK11A-220ENST00000492390 CAMKK1Q8N5S9 505 aa17.14■□□□□ 0.33
CDK11A-220ENST00000492390 SHKBP1Q8TBC3 707 aa17.14■□□□□ 0.33
CDK11A-220ENST00000492390 HSD17B14Q9BPX1 270 aa17.14■□□□□ 0.33
CDK11A-220ENST00000492390 EIF2AK1Q9BQI3 630 aaKnown RBP17.14■□□□□ 0.33
CDK11A-220ENST00000492390 LLPHQ9BRT6 129 aaKnown RBP17.14■□□□□ 0.33
CDK11A-220ENST00000492390 GTSE1Q9NYZ3 720 aa17.14■□□□□ 0.33
CDK11A-220ENST00000492390 FBXL5Q9UKA1 691 aa17.14■□□□□ 0.33
CDK11A-220ENST00000492390 SLC8A2Q9UPR5 921 aa17.14■□□□□ 0.33
CDK11A-220ENST00000492390 CCNT1O60563 726 aaKnown RBP17.13■□□□□ 0.33
CDK11A-220ENST00000492390 DEXIO95424 95 aa17.13■□□□□ 0.33
CDK11A-220ENST00000492390 BAG4O95429 457 aaKnown RBP17.13■□□□□ 0.33
CDK11A-220ENST00000492390 CAVIN2O95810 425 aa17.13■□□□□ 0.33
CDK11A-220ENST00000492390 TOP3BO95985 862 aaKnown RBP17.13■□□□□ 0.33
CDK11A-220ENST00000492390 SSRP1Q08945 709 aaKnown RBP17.13■□□□□ 0.33
CDK11A-220ENST00000492390 ELF2Q15723 593 aa17.13■□□□□ 0.33
CDK11A-220ENST00000492390 MAPK6Q16659 721 aa17.13■□□□□ 0.33
CDK11A-220ENST00000492390 DCAF4L1Q3SXM0 396 aa17.13■□□□□ 0.33
CDK11A-220ENST00000492390 ARID3BQ8IVW6 561 aaPredicted RBP17.13■□□□□ 0.33
CDK11A-220ENST00000492390 DUSP15Q9H1R2 295 aaPredicted RBP17.13■□□□□ 0.33
CDK11A-220ENST00000492390 C2orf40Q9H1Z8 148 aa17.13■□□□□ 0.33
CDK11A-220ENST00000492390 GOLGA2P5Q9HBQ8 144 aa17.13■□□□□ 0.33
CDK11A-220ENST00000492390 NCOA5Q9HCD5 579 aaKnown RBP17.13■□□□□ 0.33
CDK11A-220ENST00000492390 OBP2AQ9NY56 170 aa17.13■□□□□ 0.33
CDK11A-220ENST00000492390 SMC3Q9UQE7 1217 aa17.13■□□□□ 0.33
CDK11A-220ENST00000492390 CCDC194A0A1B0GVG4 234 aa17.12■□□□□ 0.33
CDK11A-220ENST00000492390 ACKR2O00590 384 aa17.12■□□□□ 0.33
CDK11A-220ENST00000492390 RHOBTB1O94844 696 aa17.12■□□□□ 0.33
CDK11A-220ENST00000492390 CCT2P78371 535 aaKnown RBP17.12■□□□□ 0.33
CDK11A-220ENST00000492390 CTXN3Q4LDR2 81 aa17.12■□□□□ 0.33
CDK11A-220ENST00000492390 PKN3Q6P5Z2 889 aa17.12■□□□□ 0.33
CDK11A-220ENST00000492390 TTC8Q8TAM2 541 aa17.12■□□□□ 0.33
CDK11A-220ENST00000492390 TMEM209Q96SK2 561 aa17.12■□□□□ 0.33
CDK11A-220ENST00000492390 GPRC5CQ9NQ84 441 aa17.12■□□□□ 0.33
CDK11A-220ENST00000492390 CHMP5Q9NZZ3 219 aa17.12■□□□□ 0.33
CDK11A-220ENST00000492390 NEUROG3Q9Y4Z2 214 aa17.12■□□□□ 0.33
CDK11A-220ENST00000492390 DSPP15924 2871 aaKnown RBP17.12■□□□□ 0.33
CDK11A-220ENST00000492390 SMIM28A0A1B0GU29 152 aa17.11■□□□□ 0.33
CDK11A-220ENST00000492390 A0A1W2PRU2 124 aa17.11■□□□□ 0.33
CDK11A-220ENST00000492390 BCLAF3A2AJT9 711 aaKnown RBP17.11■□□□□ 0.33
CDK11A-220ENST00000492390 DPYSL4O14531 572 aa17.11■□□□□ 0.33
CDK11A-220ENST00000492390 USO1O60763 962 aaKnown RBP17.11■□□□□ 0.33
CDK11A-220ENST00000492390 CTDNEP1O95476 244 aa17.11■□□□□ 0.33
CDK11A-220ENST00000492390 XRCC6P12956 609 aaKnown RBP eCLIP17.11■□□□□ 0.33
CDK11A-220ENST00000492390 PLCB2Q00722 1185 aa17.11■□□□□ 0.33
CDK11A-220ENST00000492390 CREB5Q02930 508 aa17.11■□□□□ 0.33
CDK11A-220ENST00000492390 PTPAQ15257 358 aa17.11■□□□□ 0.33
CDK11A-220ENST00000492390 EEF1DP3Q658K8 133 aa17.11■□□□□ 0.33
CDK11A-220ENST00000492390 ZNF280DQ6N043 979 aa17.11■□□□□ 0.33
CDK11A-220ENST00000492390 POTEDQ86YR6 584 aa17.11■□□□□ 0.33
CDK11A-220ENST00000492390 NSUN7Q8NE18 718 aaKnown RBP17.11■□□□□ 0.33
CDK11A-220ENST00000492390 MCPH1Q8NEM0 835 aa17.11■□□□□ 0.33
CDK11A-220ENST00000492390 KIF12Q96FN5 646 aa17.11■□□□□ 0.33
CDK11A-220ENST00000492390 ZFYVE19Q96K21 471 aa17.11■□□□□ 0.33
CDK11A-220ENST00000492390 LRRC3Q9BY71 257 aa17.11■□□□□ 0.33
CDK11A-220ENST00000492390 SLC38A7Q9NVC3 462 aa17.11■□□□□ 0.33
CDK11A-220ENST00000492390 LNP1A1A4G5 178 aa17.1■□□□□ 0.33
CDK11A-220ENST00000492390 PODXLO00592 558 aa17.1■□□□□ 0.33
CDK11A-220ENST00000492390 GJB2P29033 226 aa17.1■□□□□ 0.33
CDK11A-220ENST00000492390 KARSQ15046 597 aaKnown RBP17.1■□□□□ 0.33
CDK11A-220ENST00000492390 MAEAQ7L5Y9 396 aa17.1■□□□□ 0.33
CDK11A-220ENST00000492390 PIGOQ8TEQ8 1089 aa17.1■□□□□ 0.33
CDK11A-220ENST00000492390 LRRC3BQ96PB8 259 aa17.1■□□□□ 0.33
CDK11A-220ENST00000492390 CCDC113Q9H0I3 377 aa17.1■□□□□ 0.33
CDK11A-220ENST00000492390 TMEM9BQ9NQ34 198 aa17.1■□□□□ 0.33
CDK11A-220ENST00000492390 AKAP13Q12802 2813 aa17.1■□□□□ 0.33
CDK11A-220ENST00000492390 LAMA1P25391 3075 aa17.1■□□□□ 0.33
CDK11A-220ENST00000492390 JAK2O60674 1132 aa17.09■□□□□ 0.33
CDK11A-220ENST00000492390 HMGN5P82970 282 aaKnown RBP17.09■□□□□ 0.33
CDK11A-220ENST00000492390 SOX4Q06945 474 aaPredicted RBP17.09■□□□□ 0.33
CDK11A-220ENST00000492390 GRSF1Q12849 480 aaKnown RBP eCLIP17.09■□□□□ 0.33
CDK11A-220ENST00000492390 PLD1Q13393 1074 aa17.09■□□□□ 0.33
CDK11A-220ENST00000492390 ITPRIPL2Q3MIP1 535 aa17.09■□□□□ 0.33
CDK11A-220ENST00000492390 XKR4Q5GH76 650 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms