RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 ASCL5Q7RTU5 278 aa9.11□□□□□ -0.95
SMARCB1-207ENST00000491967 ZNF687Q8N1G0 1237 aa9.11□□□□□ -0.95
SMARCB1-207ENST00000491967 CLDN23Q96B33 292 aa9.11□□□□□ -0.95
SMARCB1-207ENST00000491967 DNAJC19Q96DA6 116 aa9.11□□□□□ -0.95
SMARCB1-207ENST00000491967 KIF12Q96FN5 646 aa9.11□□□□□ -0.95
SMARCB1-207ENST00000491967 BORCS6Q96GS4 357 aa9.11□□□□□ -0.95
SMARCB1-207ENST00000491967 SHDQ96IW2 340 aa9.11□□□□□ -0.95
SMARCB1-207ENST00000491967 ASB7Q9H672 318 aa9.11□□□□□ -0.95
SMARCB1-207ENST00000491967 RPF1Q9H9Y2 349 aaKnown RBP9.11□□□□□ -0.95
SMARCB1-207ENST00000491967 TRPV4Q9HBA0 871 aa9.11□□□□□ -0.95
SMARCB1-207ENST00000491967 TRPV5Q9NQA5 729 aa9.11□□□□□ -0.95
SMARCB1-207ENST00000491967 MRPS23Q9Y3D9 190 aaKnown RBP9.11□□□□□ -0.95
SMARCB1-207ENST00000491967 SIT1Q9Y3P8 196 aa9.11□□□□□ -0.95
SMARCB1-207ENST00000491967 C2CD2Q9Y426 696 aa9.11□□□□□ -0.95
SMARCB1-207ENST00000491967 DENND4CQ5VZ89 1909 aa9.11□□□□□ -0.95
SMARCB1-207ENST00000491967 PATJQ8NI35 1801 aa9.1□□□□□ -0.95
SMARCB1-207ENST00000491967 FRMD3A2A2Y4 597 aa9.1□□□□□ -0.95
SMARCB1-207ENST00000491967 PRR23AA6NEV1 266 aa9.1□□□□□ -0.95
SMARCB1-207ENST00000491967 MYMKA6NI61 221 aa9.1□□□□□ -0.95
SMARCB1-207ENST00000491967 OR6C75A6NL08 312 aa9.1□□□□□ -0.95
SMARCB1-207ENST00000491967 ANKRD63C9JTQ0 380 aa9.1□□□□□ -0.95
SMARCB1-207ENST00000491967 K7ENM7 598 aa9.1□□□□□ -0.95
SMARCB1-207ENST00000491967 PRRG1O14668 218 aa9.1□□□□□ -0.95
SMARCB1-207ENST00000491967 ZNF197O14709 1029 aa9.1□□□□□ -0.95
SMARCB1-207ENST00000491967 SPTLC1O15269 473 aa9.1□□□□□ -0.95
SMARCB1-207ENST00000491967 XPOTO43592 962 aaKnown RBP9.1□□□□□ -0.95
SMARCB1-207ENST00000491967 GFRA3O60609 400 aa9.1□□□□□ -0.95
SMARCB1-207ENST00000491967 FAM13AO94988 1023 aa9.1□□□□□ -0.95
SMARCB1-207ENST00000491967 HARSP12081 509 aaKnown RBP9.1□□□□□ -0.95
SMARCB1-207ENST00000491967 ELF1P32519 619 aa9.1□□□□□ -0.95
SMARCB1-207ENST00000491967 MLLT6P55198 1093 aaPredicted RBP9.1□□□□□ -0.95
SMARCB1-207ENST00000491967 PFKPQ01813 784 aa9.1□□□□□ -0.95
SMARCB1-207ENST00000491967 YWHAHQ04917 246 aaPredicted RBP9.1□□□□□ -0.95
SMARCB1-207ENST00000491967 SPAG1Q07617 926 aa9.1□□□□□ -0.95
SMARCB1-207ENST00000491967 ADCY1Q08828 1119 aa9.1□□□□□ -0.95
SMARCB1-207ENST00000491967 ZC2HC1CQ53FD0 456 aaPredicted RBP9.1□□□□□ -0.95
SMARCB1-207ENST00000491967 FAM78AQ5JUQ0 283 aa9.1□□□□□ -0.95
SMARCB1-207ENST00000491967 C9orf57Q5W0N0 161 aa9.1□□□□□ -0.95
SMARCB1-207ENST00000491967 TANGO2Q6ICL3 276 aa9.1□□□□□ -0.95
SMARCB1-207ENST00000491967 RNF19BQ6ZMZ0 732 aa9.1□□□□□ -0.95
SMARCB1-207ENST00000491967 MAMSTRQ6ZN01 415 aa9.1□□□□□ -0.95
SMARCB1-207ENST00000491967 MAML2Q8IZL2 1156 aaPredicted RBP9.1□□□□□ -0.95
SMARCB1-207ENST00000491967 LEMD2Q8NC56 503 aa9.1□□□□□ -0.95
SMARCB1-207ENST00000491967 PJA1Q8NG27 643 aa9.1□□□□□ -0.95
SMARCB1-207ENST00000491967 ELSPBP1Q96BH3 223 aa9.1□□□□□ -0.95
SMARCB1-207ENST00000491967 HVCN1Q96D96 273 aa9.1□□□□□ -0.95
SMARCB1-207ENST00000491967 TCEAL4Q96EI5 215 aa9.1□□□□□ -0.95
SMARCB1-207ENST00000491967 ASB16Q96NS5 453 aa9.1□□□□□ -0.95
SMARCB1-207ENST00000491967 BACH2Q9BYV9 841 aa9.1□□□□□ -0.95
SMARCB1-207ENST00000491967 PLA2G2FQ9BZM2 168 aa9.1□□□□□ -0.95
SMARCB1-207ENST00000491967 DNAJC25Q9H1X3 360 aa9.1□□□□□ -0.95
SMARCB1-207ENST00000491967 CRISPLD1Q9H336 500 aa9.1□□□□□ -0.95
SMARCB1-207ENST00000491967 SEMA4AQ9H3S1 761 aa9.1□□□□□ -0.95
SMARCB1-207ENST00000491967 CYP4F11Q9HBI6 524 aa9.1□□□□□ -0.95
SMARCB1-207ENST00000491967 OLFML3Q9NRN5 406 aa9.1□□□□□ -0.95
SMARCB1-207ENST00000491967 SEL1LQ9UBV2 794 aa9.1□□□□□ -0.95
SMARCB1-207ENST00000491967 CA14Q9ULX7 337 aa9.1□□□□□ -0.95
SMARCB1-207ENST00000491967 POLIQ9UNA4 740 aa9.1□□□□□ -0.95
SMARCB1-207ENST00000491967 MTMR6Q9Y217 621 aa9.1□□□□□ -0.95
SMARCB1-207ENST00000491967 KANSL1LA0AUZ9 987 aa9.09□□□□□ -0.95
SMARCB1-207ENST00000491967 TISP43B9A030 160 aa9.09□□□□□ -0.95
SMARCB1-207ENST00000491967 PPEF2O14830 753 aa9.09□□□□□ -0.95
SMARCB1-207ENST00000491967 TBCAO75347 108 aaKnown RBP9.09□□□□□ -0.95
SMARCB1-207ENST00000491967 LRG1P02750 347 aa9.09□□□□□ -0.95
SMARCB1-207ENST00000491967 CEBPBP17676 345 aa9.09□□□□□ -0.95
SMARCB1-207ENST00000491967 GAP43P17677 238 aa9.09□□□□□ -0.95
SMARCB1-207ENST00000491967 MARCKSP29966 332 aaPredicted RBP9.09□□□□□ -0.95
SMARCB1-207ENST00000491967 WEE1P30291 646 aa9.09□□□□□ -0.95
SMARCB1-207ENST00000491967 NASPP49321 788 aaPredicted RBP9.09□□□□□ -0.95
SMARCB1-207ENST00000491967 GUCY2FP51841 1108 aa9.09□□□□□ -0.95
SMARCB1-207ENST00000491967 DHX8Q14562 1220 aaKnown RBP9.09□□□□□ -0.95
SMARCB1-207ENST00000491967 POSTNQ15063 836 aa9.09□□□□□ -0.95
SMARCB1-207ENST00000491967 MLF2Q15773 248 aaPredicted RBP9.09□□□□□ -0.95
SMARCB1-207ENST00000491967 SPECC1Q5M775 1068 aa9.09□□□□□ -0.95
SMARCB1-207ENST00000491967 JADE1Q6IE81 842 aa9.09□□□□□ -0.95
SMARCB1-207ENST00000491967 CENPPQ6IPU0 288 aa9.09□□□□□ -0.95
SMARCB1-207ENST00000491967 FRMD5Q7Z6J6 570 aa9.09□□□□□ -0.95
SMARCB1-207ENST00000491967 NT5DC4Q86YG4 428 aa9.09□□□□□ -0.95
SMARCB1-207ENST00000491967 TMC8Q8IU68 726 aa9.09□□□□□ -0.95
SMARCB1-207ENST00000491967 KRI1Q8N9T8 703 aaKnown RBP9.09□□□□□ -0.95
SMARCB1-207ENST00000491967 ST13P5Q8NFI4 369 aaPredicted RBP9.09□□□□□ -0.95
SMARCB1-207ENST00000491967 CXorf38Q8TB03 319 aa9.09□□□□□ -0.95
SMARCB1-207ENST00000491967 ING5Q8WYH8 240 aa9.09□□□□□ -0.95
SMARCB1-207ENST00000491967 NELL1Q92832 810 aa9.09□□□□□ -0.95
SMARCB1-207ENST00000491967 DNASE1L2Q92874 299 aa9.09□□□□□ -0.95
SMARCB1-207ENST00000491967 MCRS1Q96EZ8 462 aa9.09□□□□□ -0.95
SMARCB1-207ENST00000491967 BICD1Q96G01 975 aa9.09□□□□□ -0.95
SMARCB1-207ENST00000491967 SENP8Q96LD8 212 aa9.09□□□□□ -0.95
SMARCB1-207ENST00000491967 ZSWIM3Q96MP5 696 aa9.09□□□□□ -0.95
SMARCB1-207ENST00000491967 CLIC6Q96NY7 704 aa9.09□□□□□ -0.95
SMARCB1-207ENST00000491967 NELL2Q99435 816 aa9.09□□□□□ -0.95
SMARCB1-207ENST00000491967 KXD1Q9BQD3 176 aa9.09□□□□□ -0.95
SMARCB1-207ENST00000491967 CORO1BQ9BR76 489 aa9.09□□□□□ -0.95
SMARCB1-207ENST00000491967 MSTO1Q9BUK6 570 aa9.09□□□□□ -0.95
SMARCB1-207ENST00000491967 CCDC39Q9UFE4 941 aa9.09□□□□□ -0.95
SMARCB1-207ENST00000491967 MTF2Q9Y483 593 aaPredicted RBP9.09□□□□□ -0.95
SMARCB1-207ENST00000491967 COL4A3Q01955 1670 aa9.09□□□□□ -0.95
SMARCB1-207ENST00000491967 CACNA1AO00555 2505 aa9.08□□□□□ -0.96
SMARCB1-207ENST00000491967 TCHHQ07283 1943 aa9.08□□□□□ -0.96
SMARCB1-207ENST00000491967 A0A087X0B3 334 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms