RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 ZPBP2Q6X784 338 aa9.69□□□□□ -0.86
HDAC3-211ENST00000491581 EFCAB13Q8IY85 973 aa9.69□□□□□ -0.86
HDAC3-211ENST00000491581 GPR65Q8IYL9 337 aa9.69□□□□□ -0.86
HDAC3-211ENST00000491581 PDILTQ8N807 584 aa9.69□□□□□ -0.86
HDAC3-211ENST00000491581 ATAD1Q8NBU5 361 aa9.69□□□□□ -0.86
HDAC3-211ENST00000491581 SPRYD3Q8NCJ5 442 aa9.69□□□□□ -0.86
HDAC3-211ENST00000491581 OR10T2Q8NGX3 314 aa9.69□□□□□ -0.86
HDAC3-211ENST00000491581 LARP4BQ92615 738 aaKnown RBP9.69□□□□□ -0.86
HDAC3-211ENST00000491581 SAAL1Q96ER3 474 aa9.69□□□□□ -0.86
HDAC3-211ENST00000491581 CALML4Q96GE6 196 aa9.69□□□□□ -0.86
HDAC3-211ENST00000491581 RTP3Q9BQQ7 232 aa9.69□□□□□ -0.86
HDAC3-211ENST00000491581 MSTO1Q9BUK6 570 aa9.69□□□□□ -0.86
HDAC3-211ENST00000491581 TFIP11Q9UBB9 837 aaKnown RBP9.69□□□□□ -0.86
HDAC3-211ENST00000491581 CPSF3Q9UKF6 684 aaKnown RBP9.69□□□□□ -0.86
HDAC3-211ENST00000491581 PCDHB8Q9UN66 801 aa9.69□□□□□ -0.86
HDAC3-211ENST00000491581 MTMR6Q9Y217 621 aa9.69□□□□□ -0.86
HDAC3-211ENST00000491581 KIF3AQ9Y496 699 aa9.69□□□□□ -0.86
HDAC3-211ENST00000491581 ARHGEF37A1IGU5 675 aa9.68□□□□□ -0.86
HDAC3-211ENST00000491581 OGTO15294 1046 aa9.68□□□□□ -0.86
HDAC3-211ENST00000491581 TRAPPC3O43617 180 aa9.68□□□□□ -0.86
HDAC3-211ENST00000491581 XYLBO75191 536 aa9.68□□□□□ -0.86
HDAC3-211ENST00000491581 LRG1P02750 347 aa9.68□□□□□ -0.86
HDAC3-211ENST00000491581 CLTAP09496 248 aa9.68□□□□□ -0.86
HDAC3-211ENST00000491581 RFX1P22670 979 aa9.68□□□□□ -0.86
HDAC3-211ENST00000491581 TARSP26639 723 aaKnown RBP9.68□□□□□ -0.86
HDAC3-211ENST00000491581 HOXA9P31269 272 aa9.68□□□□□ -0.86
HDAC3-211ENST00000491581 NBL1P41271 181 aa9.68□□□□□ -0.86
HDAC3-211ENST00000491581 SOX9P48436 509 aa9.68□□□□□ -0.86
HDAC3-211ENST00000491581 GPR15P49685 360 aa9.68□□□□□ -0.86
HDAC3-211ENST00000491581 PPP2R3AQ06190 1150 aa9.68□□□□□ -0.86
HDAC3-211ENST00000491581 UBXN2BQ14CS0 331 aa9.68□□□□□ -0.86
HDAC3-211ENST00000491581 SLC44A4Q53GD3 710 aa9.68□□□□□ -0.86
HDAC3-211ENST00000491581 WDR44Q5JSH3 913 aa9.68□□□□□ -0.86
HDAC3-211ENST00000491581 C9orf57Q5W0N0 161 aa9.68□□□□□ -0.86
HDAC3-211ENST00000491581 LMBRD2Q68DH5 695 aaPredicted RBP9.68□□□□□ -0.86
HDAC3-211ENST00000491581 ELMSAN1Q6PJG2 1045 aa9.68□□□□□ -0.86
HDAC3-211ENST00000491581 CYP26C1Q6V0L0 522 aa9.68□□□□□ -0.86
HDAC3-211ENST00000491581 DSTYKQ6XUX3 929 aa9.68□□□□□ -0.86
HDAC3-211ENST00000491581 TPRG1Q6ZUI0 275 aa9.68□□□□□ -0.86
HDAC3-211ENST00000491581 DCLK2Q8N568 766 aa9.68□□□□□ -0.86
HDAC3-211ENST00000491581 PJA1Q8NG27 643 aa9.68□□□□□ -0.86
HDAC3-211ENST00000491581 SHKBP1Q8TBC3 707 aa9.68□□□□□ -0.86
HDAC3-211ENST00000491581 NOC3LQ8WTT2 800 aaKnown RBP9.68□□□□□ -0.86
HDAC3-211ENST00000491581 DNAJC19Q96DA6 116 aa9.68□□□□□ -0.86
HDAC3-211ENST00000491581 LRRC3BQ96PB8 259 aa9.68□□□□□ -0.86
HDAC3-211ENST00000491581 LPIN3Q9BQK8 851 aa9.68□□□□□ -0.86
HDAC3-211ENST00000491581 TIPINQ9BVW5 301 aa9.68□□□□□ -0.86
HDAC3-211ENST00000491581 LRRC3Q9BY71 257 aa9.68□□□□□ -0.86
HDAC3-211ENST00000491581 SMG9Q9H0W8 520 aaKnown RBP9.68□□□□□ -0.86
HDAC3-211ENST00000491581 RPF1Q9H9Y2 349 aaKnown RBP9.68□□□□□ -0.86
HDAC3-211ENST00000491581 C17orf75Q9HAS0 396 aa9.68□□□□□ -0.86
HDAC3-211ENST00000491581 UPF2Q9HAU5 1272 aaKnown RBP9.68□□□□□ -0.86
HDAC3-211ENST00000491581 PARVGQ9HBI0 331 aa9.68□□□□□ -0.86
HDAC3-211ENST00000491581 SLC2A4RGQ9NR83 387 aa9.68□□□□□ -0.86
HDAC3-211ENST00000491581 SLC38A7Q9NVC3 462 aa9.68□□□□□ -0.86
HDAC3-211ENST00000491581 LARSQ9P2J5 1176 aaKnown RBP9.68□□□□□ -0.86
HDAC3-211ENST00000491581 DPP7Q9UHL4 492 aa9.68□□□□□ -0.86
HDAC3-211ENST00000491581 ODF2LQ9ULJ1 636 aa9.68□□□□□ -0.86
HDAC3-211ENST00000491581 SIT1Q9Y3P8 196 aa9.68□□□□□ -0.86
HDAC3-211ENST00000491581 YIPF1Q9Y548 306 aa9.68□□□□□ -0.86
HDAC3-211ENST00000491581 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.68□□□□□ -0.86
HDAC3-211ENST00000491581 STK24Q9Y6E0 443 aa9.68□□□□□ -0.86
HDAC3-211ENST00000491581 FANCMQ8IYD8 2048 aa9.68□□□□□ -0.86
HDAC3-211ENST00000491581 DENND4CQ5VZ89 1909 aa9.68□□□□□ -0.86
HDAC3-211ENST00000491581 NUP210Q8TEM1 1887 aaPredicted RBP9.68□□□□□ -0.86
HDAC3-211ENST00000491581 PTPRJQ12913 1337 aa9.67□□□□□ -0.86
HDAC3-211ENST00000491581 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.67□□□□□ -0.86
HDAC3-211ENST00000491581 A0A1W2PRU2 124 aa9.67□□□□□ -0.86
HDAC3-211ENST00000491581 MTMR11A4FU01 709 aa9.67□□□□□ -0.86
HDAC3-211ENST00000491581 M0QZQ0 153 aa9.67□□□□□ -0.86
HDAC3-211ENST00000491581 SYN3O14994 580 aa9.67□□□□□ -0.86
HDAC3-211ENST00000491581 TBCAO75347 108 aaKnown RBP9.67□□□□□ -0.86
HDAC3-211ENST00000491581 PIGRP01833 764 aa9.67□□□□□ -0.86
HDAC3-211ENST00000491581 PTPN2P17706 415 aa9.67□□□□□ -0.86
HDAC3-211ENST00000491581 LRPAP1P30533 357 aa9.67□□□□□ -0.86
HDAC3-211ENST00000491581 ELF1P32519 619 aa9.67□□□□□ -0.86
HDAC3-211ENST00000491581 RPL9P32969 192 aaKnown RBP9.67□□□□□ -0.86
HDAC3-211ENST00000491581 DDIT3P35638 169 aa9.67□□□□□ -0.86
HDAC3-211ENST00000491581 LONP1P36776 959 aaKnown RBP9.67□□□□□ -0.86
HDAC3-211ENST00000491581 AARSP49588 968 aaKnown RBP eCLIP9.67□□□□□ -0.86
HDAC3-211ENST00000491581 LILRA4P59901 499 aa9.67□□□□□ -0.86
HDAC3-211ENST00000491581 GTF2BQ00403 316 aa9.67□□□□□ -0.86
HDAC3-211ENST00000491581 YWHAHQ04917 246 aaPredicted RBP9.67□□□□□ -0.86
HDAC3-211ENST00000491581 PKP1Q13835 747 aa9.67□□□□□ -0.86
HDAC3-211ENST00000491581 MLF2Q15773 248 aaPredicted RBP9.67□□□□□ -0.86
HDAC3-211ENST00000491581 UVSSAQ2YD98 709 aa9.67□□□□□ -0.86
HDAC3-211ENST00000491581 SDHAF4Q5VUM1 108 aa9.67□□□□□ -0.86
HDAC3-211ENST00000491581 SPATA1Q5VX52 437 aa9.67□□□□□ -0.86
HDAC3-211ENST00000491581 ADALQ6DHV7 355 aa9.67□□□□□ -0.86
HDAC3-211ENST00000491581 ZNF280DQ6N043 979 aa9.67□□□□□ -0.86
HDAC3-211ENST00000491581 VITQ6UXI7 678 aa9.67□□□□□ -0.86
HDAC3-211ENST00000491581 BRAPQ7Z569 592 aa9.67□□□□□ -0.86
HDAC3-211ENST00000491581 APBB1IPQ7Z5R6 666 aaPredicted RBP9.67□□□□□ -0.86
HDAC3-211ENST00000491581 LRRTM3Q86VH5 581 aa9.67□□□□□ -0.86
HDAC3-211ENST00000491581 TMC8Q8IU68 726 aa9.67□□□□□ -0.86
HDAC3-211ENST00000491581 MAP4K3Q8IVH8 894 aa9.67□□□□□ -0.86
HDAC3-211ENST00000491581 TCEAL8Q8IYN2 117 aa9.67□□□□□ -0.86
HDAC3-211ENST00000491581 ELMO3Q96BJ8 720 aa9.67□□□□□ -0.86
HDAC3-211ENST00000491581 ZFYVE19Q96K21 471 aa9.67□□□□□ -0.86
HDAC3-211ENST00000491581 SENP8Q96LD8 212 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms