RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 CASP4P49662 377 aa17.57■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 SMAD4Q13485 552 aaKnown RBP17.57■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 EDRF1Q3B7T1 1238 aa17.57■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 SV2CQ496J9 727 aa17.57■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 PTCRAQ6ISU1 281 aaPredicted RBP17.57■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 PALB2Q86YC2 1186 aa17.57■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 ADSSL1Q8N142 457 aa17.57■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 CSGALNACT2Q8N6G5 542 aa17.57■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 LRRC52Q8N7C0 313 aa17.57■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 SMRP1Q8NCR6 262 aa17.57■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 SENP8Q96LD8 212 aa17.57■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 TSG101Q99816 390 aa17.57■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 CLSTN2Q9H4D0 955 aa17.57■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 SIX4Q9UIU6 781 aa17.57■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 PRUNE2Q8WUY3 3088 aa17.56■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 ARHGEF37A1IGU5 675 aa17.56■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 SPDYE4A6NLX3 237 aa17.56■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 BIN1O00499 593 aa17.56■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 PSMA7O14818 248 aa17.56■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 MAPK13O15264 365 aa17.56■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 ADAM12O43184 909 aa17.56■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 MBTPS2O43462 519 aa17.56■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 TGM5O43548 720 aa17.56■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 KRT19P08727 400 aa17.56■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 TYMPP19971 482 aa17.56■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 RBP5P82980 135 aa17.56■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 ADAM9Q13443 819 aa17.56■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 MORC3Q14149 939 aa17.56■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 MRPL58Q14197 206 aaKnown RBP17.56■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 CENPPQ6IPU0 288 aa17.56■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 ZNF280DQ6N043 979 aa17.56■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 SYCE2Q6PIF2 218 aa17.56■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 ELMSAN1Q6PJG2 1045 aa17.56■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 CXorf38Q8TB03 319 aa17.56■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 POP1Q99575 1024 aaKnown RBP17.56■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 GZF1Q9H116 711 aaPredicted RBP17.56■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 MAN1C1Q9NR34 630 aa17.56■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 KIAA1468Q9P260 1216 aa17.56■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 DPP7Q9UHL4 492 aa17.56■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 FAM50BQ9Y247 325 aa17.56■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 R3HCC1Q9Y3T6 440 aaKnown RBP17.56■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 CDY1Q9Y6F8 540 aa17.56■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 GRXCR2A6NFK2 248 aa17.55■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 KPNA7A9QM74 516 aa17.55■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 BMP1P13497 986 aa17.55■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 CD44P16070 742 aaKnown RBP17.55■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 BMP6P22004 513 aa17.55■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 OR1D2P34982 312 aa17.55■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 YWHAHQ04917 246 aaPredicted RBP17.55■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 BFSP1Q12934 665 aa17.55■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 RAB33AQ14088 237 aa17.55■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 CTXN3Q4LDR2 81 aa17.55■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 LILRA6Q6PI73 481 aa17.55■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 RSPO2Q6UXX9 243 aaPredicted RBP17.55■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 TRAPPC11Q7Z392 1133 aa17.55■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 USP37Q86T82 979 aa17.55■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 TRIML1Q8N9V2 468 aa17.55■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 PLEKHO2Q8TD55 490 aa17.55■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 PARD3BQ8TEW8 1205 aa17.55■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 HDAC7Q8WUI4 952 aa17.55■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 DHTKD1Q96HY7 919 aaPredicted RBP17.55■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 APOL5Q9BWW9 433 aa17.55■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 NUP62CLQ9H1M0 184 aa17.55■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 S1PR5Q9H228 398 aa17.55■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 SFXN1Q9H9B4 322 aa17.55■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 TIMM13Q9Y5L4 95 aaPredicted RBP17.55■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 TSC2P49815 1807 aa17.55■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 LRRIQ3A6PVS8 624 aaPredicted RBP17.54■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 CYB561D2O14569 222 aa17.54■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 TBC1D4O60343 1298 aa17.54■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 AKAP3O75969 853 aa17.54■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 IL9P15248 144 aa17.54■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 CCNE1P24864 410 aa17.54■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 PSMC2P35998 433 aaKnown RBP17.54■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 LRRC63Q05C16 580 aa17.54■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 RARS2Q5T160 578 aaKnown RBP17.54■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 ANKRD40Q6AI12 368 aa17.54■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 SCARA3Q6AZY7 606 aa17.54■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 SLC8B1Q6J4K2 584 aa17.54■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 FAM186BQ8IYM0 893 aa17.54■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 TMC2Q8TDI7 906 aa17.54■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 BORCS6Q96GS4 357 aa17.54■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 OXCT2Q9BYC2 517 aaPredicted RBP17.54■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 PLEKHA4Q9H4M7 779 aa17.54■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 FBXL5Q9UKA1 691 aa17.54■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 FBXW11Q9UKB1 542 aa17.54■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 DSEQ9UL01 958 aa17.54■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 USP15Q9Y4E8 981 aaPredicted RBP17.54■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 SCN1AP35498 2009 aa17.54■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 SPTBN5Q9NRC6 3674 aaKnown RBP17.53■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 TRIM49BA6NDI0 452 aa17.53■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 CETN3O15182 167 aa17.53■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 OAZ2O95190 189 aa17.53■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 CYP11A1P05108 521 aa17.53■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 SPATA31D3P0C874 917 aa17.53■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 KRT13P13646 458 aa17.53■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 AP3M2P53677 418 aa17.53■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 PMS1P54277 932 aaKnown RBP17.53■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 CLDN10P78369 228 aa17.53■□□□□ 0.4
MSH5-SAPCD1-206ENST00000491552 ROR1Q01973 937 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms