RNA–Protein interactions for RNA: ENST00000491233.1

COL6A3-211, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 3

Gene COL6A3, Length 652 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-211ENST00000491233 JADE1Q6IE81 842 aa14.82□□□□□ -0.04
COL6A3-211ENST00000491233 DSTYKQ6XUX3 929 aa14.82□□□□□ -0.04
COL6A3-211ENST00000491233 HS6ST3Q8IZP7 471 aa14.82□□□□□ -0.04
COL6A3-211ENST00000491233 ELMOD1Q8N336 334 aa14.82□□□□□ -0.04
COL6A3-211ENST00000491233 EPSTI1Q96J88 318 aa14.82□□□□□ -0.04
COL6A3-211ENST00000491233 PGLYRP2Q96PD5 576 aa14.82□□□□□ -0.04
COL6A3-211ENST00000491233 DDX23Q9BUQ8 820 aaKnown RBP14.82□□□□□ -0.04
COL6A3-211ENST00000491233 PLA2G2FQ9BZM2 168 aa14.82□□□□□ -0.04
COL6A3-211ENST00000491233 CEP72Q9P209 647 aa14.82□□□□□ -0.04
COL6A3-211ENST00000491233 CPSF3Q9UKF6 684 aaKnown RBP14.82□□□□□ -0.04
COL6A3-211ENST00000491233 YIPF1Q9Y548 306 aa14.82□□□□□ -0.04
COL6A3-211ENST00000491233 NUP210Q8TEM1 1887 aaPredicted RBP14.81□□□□□ -0.04
COL6A3-211ENST00000491233 TISP43B9A030 160 aa14.81□□□□□ -0.04
COL6A3-211ENST00000491233 ANKRD63C9JTQ0 380 aa14.81□□□□□ -0.04
COL6A3-211ENST00000491233 ZNF197O14709 1029 aa14.81□□□□□ -0.04
COL6A3-211ENST00000491233 OAZ2O95190 189 aa14.81□□□□□ -0.04
COL6A3-211ENST00000491233 VNN2O95498 520 aa14.81□□□□□ -0.04
COL6A3-211ENST00000491233 ADRB2P07550 413 aa14.81□□□□□ -0.04
COL6A3-211ENST00000491233 MYL4P12829 197 aa14.81□□□□□ -0.04
COL6A3-211ENST00000491233 FCARP24071 287 aa14.81□□□□□ -0.04
COL6A3-211ENST00000491233 ABCD1P33897 745 aa14.81□□□□□ -0.04
COL6A3-211ENST00000491233 RESTQ13127 1097 aa14.81□□□□□ -0.04
COL6A3-211ENST00000491233 UBXN2BQ14CS0 331 aa14.81□□□□□ -0.04
COL6A3-211ENST00000491233 SLC44A4Q53GD3 710 aa14.81□□□□□ -0.04
COL6A3-211ENST00000491233 CYP4A22Q5TCH4 519 aa14.81□□□□□ -0.04
COL6A3-211ENST00000491233 TANGO2Q6ICL3 276 aa14.81□□□□□ -0.04
COL6A3-211ENST00000491233 IQCEQ6IPM2 695 aa14.81□□□□□ -0.04
COL6A3-211ENST00000491233 FAM173BQ6P4H8 233 aa14.81□□□□□ -0.04
COL6A3-211ENST00000491233 DYMQ7RTS9 669 aa14.81□□□□□ -0.04
COL6A3-211ENST00000491233 USP37Q86T82 979 aa14.81□□□□□ -0.04
COL6A3-211ENST00000491233 SFR1Q86XK3 245 aa14.81□□□□□ -0.04
COL6A3-211ENST00000491233 KRI1Q8N9T8 703 aaKnown RBP14.81□□□□□ -0.04
COL6A3-211ENST00000491233 BEST2Q8NFU1 509 aa14.81□□□□□ -0.04
COL6A3-211ENST00000491233 ELSPBP1Q96BH3 223 aa14.81□□□□□ -0.04
COL6A3-211ENST00000491233 ZNF512Q96ME7 567 aaPredicted RBP14.81□□□□□ -0.04
COL6A3-211ENST00000491233 TSPAN18Q96SJ8 248 aa14.81□□□□□ -0.04
COL6A3-211ENST00000491233 ASAH2Q9NR71 780 aa14.81□□□□□ -0.04
COL6A3-211ENST00000491233 STK17AQ9UEE5 414 aa14.81□□□□□ -0.04
COL6A3-211ENST00000491233 FBXO2Q9UK22 296 aaPredicted RBP14.81□□□□□ -0.04
COL6A3-211ENST00000491233 MAFFQ9ULX9 164 aa14.81□□□□□ -0.04
COL6A3-211ENST00000491233 USP34Q70CQ2 3546 aa14.81□□□□□ -0.04
COL6A3-211ENST00000491233 ZFHX2Q9C0A1 2572 aaPredicted RBP14.8□□□□□ -0.04
COL6A3-211ENST00000491233 OR6C75A6NL08 312 aa14.8□□□□□ -0.04
COL6A3-211ENST00000491233 MOSPD3O75425 235 aa14.8□□□□□ -0.04
COL6A3-211ENST00000491233 MICAL2O94851 1124 aa14.8□□□□□ -0.04
COL6A3-211ENST00000491233 GJA1P17302 382 aa14.8□□□□□ -0.04
COL6A3-211ENST00000491233 TYMPP19971 482 aa14.8□□□□□ -0.04
COL6A3-211ENST00000491233 DDIT3P35638 169 aa14.8□□□□□ -0.04
COL6A3-211ENST00000491233 ACOT2P49753 483 aa14.8□□□□□ -0.04
COL6A3-211ENST00000491233 GRM2Q14416 872 aa14.8□□□□□ -0.04
COL6A3-211ENST00000491233 TMEM132DQ14C87 1099 aa14.8□□□□□ -0.04
COL6A3-211ENST00000491233 FAM78AQ5JUQ0 283 aa14.8□□□□□ -0.04
COL6A3-211ENST00000491233 ADALQ6DHV7 355 aa14.8□□□□□ -0.04
COL6A3-211ENST00000491233 OVOS1Q6IE37 1185 aa14.8□□□□□ -0.04
COL6A3-211ENST00000491233 TPRG1Q6ZUI0 275 aa14.8□□□□□ -0.04
COL6A3-211ENST00000491233 CD302Q8IX05 232 aa14.8□□□□□ -0.04
COL6A3-211ENST00000491233 OXCT2Q9BYC2 517 aaPredicted RBP14.8□□□□□ -0.04
COL6A3-211ENST00000491233 CRISPLD1Q9H336 500 aa14.8□□□□□ -0.04
COL6A3-211ENST00000491233 ST6GALNAC4Q9H4F1 302 aa14.8□□□□□ -0.04
COL6A3-211ENST00000491233 LTB4R2Q9NPC1 389 aa14.8□□□□□ -0.04
COL6A3-211ENST00000491233 CCDC39Q9UFE4 941 aa14.8□□□□□ -0.04
COL6A3-211ENST00000491233 R4GN57 208 aa14.8□□□□□ -0.04
COL6A3-211ENST00000491233 SPTLC1O15269 473 aa14.79□□□□□ -0.04
COL6A3-211ENST00000491233 ODC1P11926 461 aa14.79□□□□□ -0.04
COL6A3-211ENST00000491233 SYT1P21579 422 aa14.79□□□□□ -0.04
COL6A3-211ENST00000491233 CD72P21854 359 aa14.79□□□□□ -0.04
COL6A3-211ENST00000491233 TXLNAP40222 546 aa14.79□□□□□ -0.04
COL6A3-211ENST00000491233 EPHA5P54756 1037 aa14.79□□□□□ -0.04
COL6A3-211ENST00000491233 LILRA4P59901 499 aa14.79□□□□□ -0.04
COL6A3-211ENST00000491233 CEBPZQ03701 1054 aaKnown RBP14.79□□□□□ -0.04
COL6A3-211ENST00000491233 PLD1Q13393 1074 aa14.79□□□□□ -0.04
COL6A3-211ENST00000491233 C9orf57Q5W0N0 161 aa14.79□□□□□ -0.04
COL6A3-211ENST00000491233 C1orf210Q8IVY1 113 aa14.79□□□□□ -0.04
COL6A3-211ENST00000491233 ADSSL1Q8N142 457 aa14.79□□□□□ -0.04
COL6A3-211ENST00000491233 LEMD2Q8NC56 503 aa14.79□□□□□ -0.04
COL6A3-211ENST00000491233 DNASE1L2Q92874 299 aa14.79□□□□□ -0.04
COL6A3-211ENST00000491233 HVCN1Q96D96 273 aa14.79□□□□□ -0.04
COL6A3-211ENST00000491233 SENP8Q96LD8 212 aa14.79□□□□□ -0.04
COL6A3-211ENST00000491233 ASB16Q96NS5 453 aa14.79□□□□□ -0.04
COL6A3-211ENST00000491233 CLIC6Q96NY7 704 aa14.79□□□□□ -0.04
COL6A3-211ENST00000491233 BCO2Q9BYV7 579 aa14.79□□□□□ -0.04
COL6A3-211ENST00000491233 IKZF4Q9H2S9 585 aa14.79□□□□□ -0.04
COL6A3-211ENST00000491233 ZFP14Q9HCL3 533 aa14.79□□□□□ -0.04
COL6A3-211ENST00000491233 HEBP1Q9NRV9 189 aa14.79□□□□□ -0.04
COL6A3-211ENST00000491233 DERAQ9Y315 318 aa14.79□□□□□ -0.04
COL6A3-211ENST00000491233 MTF2Q9Y483 593 aaPredicted RBP14.79□□□□□ -0.04
COL6A3-211ENST00000491233 CACNA1IQ9P0X4 2223 aa14.78□□□□□ -0.04
COL6A3-211ENST00000491233 MTMR11A4FU01 709 aa14.78□□□□□ -0.04
COL6A3-211ENST00000491233 FAM170BA6NMN3 283 aa14.78□□□□□ -0.04
COL6A3-211ENST00000491233 PPP1R37O75864 691 aa14.78□□□□□ -0.04
COL6A3-211ENST00000491233 SP9P0CG40 484 aa14.78□□□□□ -0.04
COL6A3-211ENST00000491233 TARSP26639 723 aaKnown RBP14.78□□□□□ -0.04
COL6A3-211ENST00000491233 DUSP4Q13115 394 aa14.78□□□□□ -0.04
COL6A3-211ENST00000491233 GPR17Q13304 367 aa14.78□□□□□ -0.04
COL6A3-211ENST00000491233 MYBPC2Q14324 1141 aa14.78□□□□□ -0.04
COL6A3-211ENST00000491233 TEAD2Q15562 447 aa14.78□□□□□ -0.04
COL6A3-211ENST00000491233 RRAGBQ5VZM2 374 aa14.78□□□□□ -0.04
COL6A3-211ENST00000491233 SLFN12LQ6IEE8 588 aa14.78□□□□□ -0.04
COL6A3-211ENST00000491233 VITQ6UXI7 678 aa14.78□□□□□ -0.04
COL6A3-211ENST00000491233 TTC9BQ8N6N2 239 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms