RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 PEX3P56589 373 aa15.27■□□□□ 0.04
VARS-227ENST00000489979 WDR44Q5JSH3 913 aa15.27■□□□□ 0.04
VARS-227ENST00000489979 HAUS3Q68CZ6 603 aa15.27■□□□□ 0.04
VARS-227ENST00000489979 Q6ZS52 159 aa15.27■□□□□ 0.04
VARS-227ENST00000489979 TAS1R3Q7RTX0 852 aa15.27■□□□□ 0.04
VARS-227ENST00000489979 GPIHBP1Q8IV16 184 aa15.27■□□□□ 0.04
VARS-227ENST00000489979 APPL2Q8NEU8 664 aa15.27■□□□□ 0.04
VARS-227ENST00000489979 E2F7Q96AV8 911 aa15.27■□□□□ 0.04
VARS-227ENST00000489979 MSANTD3Q96H12 275 aa15.27■□□□□ 0.04
VARS-227ENST00000489979 TBC1D32Q96NH3 1257 aa15.27■□□□□ 0.04
VARS-227ENST00000489979 TARS2Q9BW92 718 aaKnown RBP15.27■□□□□ 0.04
VARS-227ENST00000489979 C8orf33Q9H7E9 229 aaPredicted RBP15.27■□□□□ 0.04
VARS-227ENST00000489979 C2orf42Q9NWW7 574 aa15.27■□□□□ 0.04
VARS-227ENST00000489979 CNTN3Q9P232 1028 aa15.27■□□□□ 0.04
VARS-227ENST00000489979 YIPF1Q9Y548 306 aa15.27■□□□□ 0.04
VARS-227ENST00000489979 GREB1Q4ZG55 1949 aa15.26■□□□□ 0.03
VARS-227ENST00000489979 A0A1W2PRU2 124 aa15.26■□□□□ 0.03
VARS-227ENST00000489979 CHADO15335 359 aa15.26■□□□□ 0.03
VARS-227ENST00000489979 MCF2P10911 925 aa15.26■□□□□ 0.03
VARS-227ENST00000489979 HARSP12081 509 aaKnown RBP15.26■□□□□ 0.03
VARS-227ENST00000489979 PROZP22891 400 aa15.26■□□□□ 0.03
VARS-227ENST00000489979 MARCKSP29966 332 aaPredicted RBP15.26■□□□□ 0.03
VARS-227ENST00000489979 HOXC13P31276 330 aa15.26■□□□□ 0.03
VARS-227ENST00000489979 GUCY1B3Q02153 619 aa15.26■□□□□ 0.03
VARS-227ENST00000489979 C1orf228Q6PIY5 440 aa15.26■□□□□ 0.03
VARS-227ENST00000489979 TXNDC11Q6PKC3 985 aa15.26■□□□□ 0.03
VARS-227ENST00000489979 CEP68Q76N32 757 aa15.26■□□□□ 0.03
VARS-227ENST00000489979 FAM160A2Q8N612 972 aaPredicted RBP15.26■□□□□ 0.03
VARS-227ENST00000489979 TTC8Q8TAM2 541 aa15.26■□□□□ 0.03
VARS-227ENST00000489979 TCHPQ9BT92 498 aa15.26■□□□□ 0.03
VARS-227ENST00000489979 LRRC3Q9BY71 257 aa15.26■□□□□ 0.03
VARS-227ENST00000489979 TMEM134Q9H6X4 195 aa15.26■□□□□ 0.03
VARS-227ENST00000489979 PCDHB8Q9UN66 801 aa15.26■□□□□ 0.03
VARS-227ENST00000489979 KIAA1024Q9UPX6 916 aa15.26■□□□□ 0.03
VARS-227ENST00000489979 SPAG17Q6Q759 2223 aa15.25■□□□□ 0.03
VARS-227ENST00000489979 CACNA1GO43497 2377 aa15.25■□□□□ 0.03
VARS-227ENST00000489979 MYBPHLA2RUH7 354 aa15.25■□□□□ 0.03
VARS-227ENST00000489979 SPECC1L-ADORA2AF8WAN1 911 aa15.25■□□□□ 0.03
VARS-227ENST00000489979 ABLIM1O14639 778 aa15.25■□□□□ 0.03
VARS-227ENST00000489979 VNN2O95498 520 aa15.25■□□□□ 0.03
VARS-227ENST00000489979 OR4Q2P0C623 313 aa15.25■□□□□ 0.03
VARS-227ENST00000489979 FCHO2Q0JRZ9 810 aa15.25■□□□□ 0.03
VARS-227ENST00000489979 DMP1Q13316 513 aaPredicted RBP15.25■□□□□ 0.03
VARS-227ENST00000489979 DGKKQ5KSL6 1271 aa15.25■□□□□ 0.03
VARS-227ENST00000489979 STXBP5Q5T5C0 1151 aa15.25■□□□□ 0.03
VARS-227ENST00000489979 IL31Q6EBC2 164 aa15.25■□□□□ 0.03
VARS-227ENST00000489979 MPZL3Q6UWV2 235 aa15.25■□□□□ 0.03
VARS-227ENST00000489979 TMC8Q8IU68 726 aa15.25■□□□□ 0.03
VARS-227ENST00000489979 TMEM130Q8N3G9 435 aa15.25■□□□□ 0.03
VARS-227ENST00000489979 BEST2Q8NFU1 509 aa15.25■□□□□ 0.03
VARS-227ENST00000489979 ZBTB45Q96K62 511 aaPredicted RBP15.25■□□□□ 0.03
VARS-227ENST00000489979 PGLYRP2Q96PD5 576 aa15.25■□□□□ 0.03
VARS-227ENST00000489979 DNAJC25Q9H1X3 360 aa15.25■□□□□ 0.03
VARS-227ENST00000489979 ARHGAP28Q9P2N2 729 aa15.25■□□□□ 0.03
VARS-227ENST00000489979 TUBGCP4Q9UGJ1 667 aa15.25■□□□□ 0.03
VARS-227ENST00000489979 KIF26AQ9ULI4 1882 aaPredicted RBP15.25■□□□□ 0.03
VARS-227ENST00000489979 CHD6Q8TD26 2715 aa15.24■□□□□ 0.03
VARS-227ENST00000489979 FOXD2O60548 495 aaPredicted RBP15.24■□□□□ 0.03
VARS-227ENST00000489979 HIP1RO75146 1068 aa15.24■□□□□ 0.03
VARS-227ENST00000489979 CTHP32929 405 aa15.24■□□□□ 0.03
VARS-227ENST00000489979 DUSP4Q13115 394 aa15.24■□□□□ 0.03
VARS-227ENST00000489979 PLD1Q13393 1074 aa15.24■□□□□ 0.03
VARS-227ENST00000489979 PON2Q15165 354 aa15.24■□□□□ 0.03
VARS-227ENST00000489979 SAFBQ15424 915 aaKnown RBP eCLIP15.24■□□□□ 0.03
VARS-227ENST00000489979 SLC10A6Q3KNW5 377 aa15.24■□□□□ 0.03
VARS-227ENST00000489979 AASDHQ4L235 1098 aaPredicted RBP15.24■□□□□ 0.03
VARS-227ENST00000489979 SEZ6Q53EL9 994 aa15.24■□□□□ 0.03
VARS-227ENST00000489979 WDR5BQ86VZ2 330 aa15.24■□□□□ 0.03
VARS-227ENST00000489979 ARID3BQ8IVW6 561 aaPredicted RBP15.24■□□□□ 0.03
VARS-227ENST00000489979 DAW1Q8N136 415 aa15.24■□□□□ 0.03
VARS-227ENST00000489979 FAM200AQ8TCP9 573 aa15.24■□□□□ 0.03
VARS-227ENST00000489979 DDX1Q92499 740 aaKnown RBP15.24■□□□□ 0.03
VARS-227ENST00000489979 ZFYVE19Q96K21 471 aa15.24■□□□□ 0.03
VARS-227ENST00000489979 LRRC3BQ96PB8 259 aa15.24■□□□□ 0.03
VARS-227ENST00000489979 CRISPLD1Q9H336 500 aa15.24■□□□□ 0.03
VARS-227ENST00000489979 KMT5AQ9NQR1 393 aa15.24■□□□□ 0.03
VARS-227ENST00000489979 DDX19AQ9NUU7 478 aaKnown RBP15.24■□□□□ 0.03
VARS-227ENST00000489979 TIMM13Q9Y5L4 95 aaPredicted RBP15.24■□□□□ 0.03
VARS-227ENST00000489979 NUP210Q8TEM1 1887 aaPredicted RBP15.23■□□□□ 0.03
VARS-227ENST00000489979 AXIN1O15169 862 aa15.23■□□□□ 0.03
VARS-227ENST00000489979 OAZ2O95190 189 aa15.23■□□□□ 0.03
VARS-227ENST00000489979 EPHB3P54753 998 aa15.23■□□□□ 0.03
VARS-227ENST00000489979 YWHAHQ04917 246 aaPredicted RBP15.23■□□□□ 0.03
VARS-227ENST00000489979 ORC2Q13416 577 aaPredicted RBP15.23■□□□□ 0.03
VARS-227ENST00000489979 SF3A2Q15428 464 aaKnown RBP15.23■□□□□ 0.03
VARS-227ENST00000489979 RALGPS2Q86X27 583 aaPredicted RBP15.23■□□□□ 0.03
VARS-227ENST00000489979 ARRDC1-AS1Q9H2J1 176 aa15.23■□□□□ 0.03
VARS-227ENST00000489979 GTSE1Q9NYZ3 720 aa15.23■□□□□ 0.03
VARS-227ENST00000489979 LRWD1Q9UFC0 647 aa15.23■□□□□ 0.03
VARS-227ENST00000489979 ANGPTL2Q9UKU9 493 aa15.23■□□□□ 0.03
VARS-227ENST00000489979 RBM19Q9Y4C8 960 aaKnown RBP15.23■□□□□ 0.03
VARS-227ENST00000489979 ATG2BQ96BY7 2078 aa15.22■□□□□ 0.03
VARS-227ENST00000489979 E9PMD0 336 aa15.22■□□□□ 0.03
VARS-227ENST00000489979 M0QZQ0 153 aa15.22■□□□□ 0.03
VARS-227ENST00000489979 DPYSL4O14531 572 aa15.22■□□□□ 0.03
VARS-227ENST00000489979 SLC16A4O15374 487 aa15.22■□□□□ 0.03
VARS-227ENST00000489979 PMLP29590 882 aa15.22■□□□□ 0.03
VARS-227ENST00000489979 HOXA6P31267 233 aa15.22■□□□□ 0.03
VARS-227ENST00000489979 ALDH1A3P47895 512 aa15.22■□□□□ 0.03
VARS-227ENST00000489979 FXR2P51116 673 aaKnown RBP eCLIP15.22■□□□□ 0.032e-13■■■■■ 34.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms