RNA–Protein interactions for RNA: ENST00000489758.1

CLIC4-203, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-203ENST00000489758 SGSM1Q2NKQ1 1148 aa17.31■□□□□ 0.36
CLIC4-203ENST00000489758 SV2CQ496J9 727 aa17.31■□□□□ 0.36
CLIC4-203ENST00000489758 FUT10Q6P4F1 479 aa17.31■□□□□ 0.36
CLIC4-203ENST00000489758 DDX53Q86TM3 631 aaKnown RBP17.31■□□□□ 0.36
CLIC4-203ENST00000489758 TAF4BQ92750 862 aa17.31■□□□□ 0.36
CLIC4-203ENST00000489758 SUSD3Q96L08 255 aa17.31■□□□□ 0.36
CLIC4-203ENST00000489758 NAP1L5Q96NT1 182 aaPredicted RBP17.31■□□□□ 0.36
CLIC4-203ENST00000489758 CERS4Q9HA82 394 aa17.31■□□□□ 0.36
CLIC4-203ENST00000489758 APOBEC3GQ9HC16 384 aaKnown RBP17.31■□□□□ 0.36
CLIC4-203ENST00000489758 GDAP2Q9NXN4 497 aa17.31■□□□□ 0.36
CLIC4-203ENST00000489758 NUB1Q9Y5A7 615 aa17.31■□□□□ 0.36
CLIC4-203ENST00000489758 CHD9Q3L8U1 2897 aa17.31■□□□□ 0.36
CLIC4-203ENST00000489758 CITO14578 2027 aa17.3■□□□□ 0.36
CLIC4-203ENST00000489758 SF3B1O75533 1304 aaKnown RBP eCLIP17.3■□□□□ 0.366e-6■■■■■ 77
CLIC4-203ENST00000489758 A0A1B0GTH6 734 aa17.3■□□□□ 0.36
CLIC4-203ENST00000489758 KPNA7A9QM74 516 aa17.3■□□□□ 0.36
CLIC4-203ENST00000489758 M0QZQ0 153 aa17.3■□□□□ 0.36
CLIC4-203ENST00000489758 MYO1EQ12965 1108 aa17.3■□□□□ 0.36
CLIC4-203ENST00000489758 SPOPLQ6IQ16 392 aa17.3■□□□□ 0.36
CLIC4-203ENST00000489758 TAS1R1Q7RTX1 841 aa17.3■□□□□ 0.36
CLIC4-203ENST00000489758 LIMS2Q7Z4I7 341 aa17.3■□□□□ 0.36
CLIC4-203ENST00000489758 EHBP1Q8NDI1 1231 aa17.3■□□□□ 0.36
CLIC4-203ENST00000489758 FBXO22Q8NEZ5 403 aa17.3■□□□□ 0.36
CLIC4-203ENST00000489758 TMEM169Q96HH4 297 aa17.3■□□□□ 0.36
CLIC4-203ENST00000489758 C11orf84Q9BUA3 381 aaPredicted RBP17.3■□□□□ 0.36
CLIC4-203ENST00000489758 INTS2Q9H0H0 1204 aaKnown RBP17.3■□□□□ 0.36
CLIC4-203ENST00000489758 RTN4Q9NQC3 1192 aaKnown RBP17.3■□□□□ 0.36
CLIC4-203ENST00000489758 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.3■□□□□ 0.36
CLIC4-203ENST00000489758 LZTS1Q9Y250 596 aa17.3■□□□□ 0.36
CLIC4-203ENST00000489758 H3BNC9 293 aa17.29■□□□□ 0.36
CLIC4-203ENST00000489758 SERPINC1P01008 464 aa17.29■□□□□ 0.36
CLIC4-203ENST00000489758 TPM2P07951 284 aa17.29■□□□□ 0.36
CLIC4-203ENST00000489758 FGFR3P22607 806 aa17.29■□□□□ 0.36
CLIC4-203ENST00000489758 DNAJB1P25685 340 aa17.29■□□□□ 0.36
CLIC4-203ENST00000489758 NOP14P78316 857 aaKnown RBP17.29■□□□□ 0.36
CLIC4-203ENST00000489758 KRT17Q04695 432 aa17.29■□□□□ 0.36
CLIC4-203ENST00000489758 KCNMA1Q12791 1236 aa17.29■□□□□ 0.36
CLIC4-203ENST00000489758 CETN1Q12798 172 aa17.29■□□□□ 0.36
CLIC4-203ENST00000489758 ZNF699Q32M78 642 aa17.29■□□□□ 0.36
CLIC4-203ENST00000489758 DPY19L2P1Q6NXN4 242 aa17.29■□□□□ 0.36
CLIC4-203ENST00000489758 SPPL3Q8TCT6 385 aa17.29■□□□□ 0.36
CLIC4-203ENST00000489758 ARNTL2Q8WYA1 636 aa17.29■□□□□ 0.36
CLIC4-203ENST00000489758 SENP8Q96LD8 212 aa17.29■□□□□ 0.36
CLIC4-203ENST00000489758 CRACR2AQ9BSW2 395 aa17.29■□□□□ 0.36
CLIC4-203ENST00000489758 TTYH1Q9H313 450 aaPredicted RBP17.29■□□□□ 0.36
CLIC4-203ENST00000489758 ALG13Q9NP73 1137 aaKnown RBP17.29■□□□□ 0.36
CLIC4-203ENST00000489758 GCNT4Q9P109 453 aa17.29■□□□□ 0.36
CLIC4-203ENST00000489758 PCDHB8Q9UN66 801 aa17.29■□□□□ 0.36
CLIC4-203ENST00000489758 POLIQ9UNA4 740 aa17.29■□□□□ 0.36
CLIC4-203ENST00000489758 R3HCC1Q9Y3T6 440 aaKnown RBP17.29■□□□□ 0.36
CLIC4-203ENST00000489758 SZT2Q5T011 3432 aa17.29■□□□□ 0.36
CLIC4-203ENST00000489758 TMEM265A0A087WTH1 108 aa17.28■□□□□ 0.36
CLIC4-203ENST00000489758 PES1O00541 588 aaKnown RBP17.28■□□□□ 0.36
CLIC4-203ENST00000489758 GRM6O15303 877 aa17.28■□□□□ 0.36
CLIC4-203ENST00000489758 TEX33O43247 280 aa17.28■□□□□ 0.36
CLIC4-203ENST00000489758 AP5Z1O43299 807 aa17.28■□□□□ 0.36
CLIC4-203ENST00000489758 TRAPPC3O43617 180 aa17.28■□□□□ 0.36
CLIC4-203ENST00000489758 SLC9A1P19634 815 aa17.28■□□□□ 0.36
CLIC4-203ENST00000489758 PON1P27169 355 aa17.28■□□□□ 0.36
CLIC4-203ENST00000489758 ASPAP45381 313 aa17.28■□□□□ 0.36
CLIC4-203ENST00000489758 APBA1Q02410 837 aa17.28■□□□□ 0.36
CLIC4-203ENST00000489758 ELAVL2Q12926 359 aaKnown RBP17.28■□□□□ 0.36
CLIC4-203ENST00000489758 CAMK1Q14012 370 aa17.28■□□□□ 0.36
CLIC4-203ENST00000489758 NR1I3Q14994 352 aa17.28■□□□□ 0.36
CLIC4-203ENST00000489758 EXOC3L4Q17RC7 722 aa17.28■□□□□ 0.36
CLIC4-203ENST00000489758 WDR72Q3MJ13 1102 aa17.28■□□□□ 0.36
CLIC4-203ENST00000489758 RTP2Q5QGT7 225 aa17.28■□□□□ 0.36
CLIC4-203ENST00000489758 FAM171A1Q5VUB5 890 aa17.28■□□□□ 0.36
CLIC4-203ENST00000489758 TRIM65Q6PJ69 517 aa17.28■□□□□ 0.36
CLIC4-203ENST00000489758 DSTYKQ6XUX3 929 aa17.28■□□□□ 0.36
CLIC4-203ENST00000489758 GBP6Q6ZN66 633 aa17.28■□□□□ 0.36
CLIC4-203ENST00000489758 TATDN2Q93075 761 aa17.28■□□□□ 0.36
CLIC4-203ENST00000489758 B3GALT6Q96L58 329 aa17.28■□□□□ 0.36
CLIC4-203ENST00000489758 HERC2P3Q9BVR0 1158 aa17.28■□□□□ 0.36
CLIC4-203ENST00000489758 ZNF576Q9H609 170 aa17.28■□□□□ 0.36
CLIC4-203ENST00000489758 SIX2Q9NPC8 291 aa17.28■□□□□ 0.36
CLIC4-203ENST00000489758 CHST7Q9NS84 486 aa17.28■□□□□ 0.36
CLIC4-203ENST00000489758 L1RE1Q9UN81 338 aa17.28■□□□□ 0.36
CLIC4-203ENST00000489758 SNX9Q9Y5X1 595 aa17.28■□□□□ 0.36
CLIC4-203ENST00000489758 KIAA1671Q9BY89 1806 aa17.28■□□□□ 0.36
CLIC4-203ENST00000489758 TDRD15B5MCY1 1934 aaKnown RBP17.27■□□□□ 0.36
CLIC4-203ENST00000489758 GBF1Q92538 1859 aa17.27■□□□□ 0.36
CLIC4-203ENST00000489758 CYB561D2O14569 222 aa17.27■□□□□ 0.36
CLIC4-203ENST00000489758 SYN3O14994 580 aa17.27■□□□□ 0.36
CLIC4-203ENST00000489758 SOD2P04179 222 aa17.27■□□□□ 0.36
CLIC4-203ENST00000489758 CYP11A1P05108 521 aa17.27■□□□□ 0.36
CLIC4-203ENST00000489758 TKTP29401 623 aaKnown RBP17.27■□□□□ 0.36
CLIC4-203ENST00000489758 UBXN1Q04323 297 aa17.27■□□□□ 0.36
CLIC4-203ENST00000489758 UBE3AQ05086 875 aa17.27■□□□□ 0.36
CLIC4-203ENST00000489758 GPM6BQ13491 265 aa17.27■□□□□ 0.36
CLIC4-203ENST00000489758 SOWAHAQ2M3V2 549 aa17.27■□□□□ 0.36
CLIC4-203ENST00000489758 ZNF667Q5HYK9 610 aa17.27■□□□□ 0.36
CLIC4-203ENST00000489758 FKBP15Q5T1M5 1219 aa17.27■□□□□ 0.36
CLIC4-203ENST00000489758 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.27■□□□□ 0.36
CLIC4-203ENST00000489758 VPS52Q8N1B4 723 aa17.27■□□□□ 0.36
CLIC4-203ENST00000489758 PDCL2Q8N4E4 241 aa17.27■□□□□ 0.36
CLIC4-203ENST00000489758 POF1BQ8WVV4 589 aa17.27■□□□□ 0.36
CLIC4-203ENST00000489758 ERGIC2Q96RQ1 377 aa17.27■□□□□ 0.36
CLIC4-203ENST00000489758 IMPG2Q9BZV3 1241 aa17.27■□□□□ 0.36
CLIC4-203ENST00000489758 NIF3L1Q9GZT8 377 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms