RNA–Protein interactions for RNA: ENST00000489707.5

PTK7-216, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 1 (best)

Gene PTK7, Length 1,935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-216ENST00000489707 AADACL2Q6P093 401 aa16.51■□□□□ 0.23
PTK7-216ENST00000489707 GPRC5AQ8NFJ5 357 aa16.51■□□□□ 0.23
PTK7-216ENST00000489707 C11orf70Q9BRQ4 267 aa16.51■□□□□ 0.23
PTK7-216ENST00000489707 INO80BQ9C086 356 aaPredicted RBP16.51■□□□□ 0.23
PTK7-216ENST00000489707 RASSF4Q9H2L5 321 aa16.51■□□□□ 0.23
PTK7-216ENST00000489707 VTA1Q9NP79 307 aa16.51■□□□□ 0.23
PTK7-216ENST00000489707 IP6K2Q9UHH9 426 aa16.51■□□□□ 0.23
PTK7-216ENST00000489707 SLC45A1Q9Y2W3 748 aa16.51■□□□□ 0.23
PTK7-216ENST00000489707 IRAK1P51617 712 aa16.51■□□□□ 0.23
PTK7-216ENST00000489707 CDR1P51861 262 aa16.51■□□□□ 0.23
PTK7-216ENST00000489707 TNFAIP2Q03169 654 aa16.51■□□□□ 0.23
PTK7-216ENST00000489707 IFFO1Q0D2I5 559 aa16.51■□□□□ 0.23
PTK7-216ENST00000489707 CALCOCO2Q13137 446 aa16.51■□□□□ 0.23
PTK7-216ENST00000489707 UAP1Q16222 522 aaPredicted RBP16.51■□□□□ 0.23
PTK7-216ENST00000489707 ZNF699Q32M78 642 aa16.51■□□□□ 0.23
PTK7-216ENST00000489707 SGO2Q562F6 1265 aa16.51■□□□□ 0.23
PTK7-216ENST00000489707 LDLRAD1Q5T700 205 aa16.51■□□□□ 0.23
PTK7-216ENST00000489707 AGBL2Q5U5Z8 902 aa16.51■□□□□ 0.23
PTK7-216ENST00000489707 LRRC31Q6UY01 552 aa16.51■□□□□ 0.23
PTK7-216ENST00000489707 MOB2Q70IA6 237 aa16.51■□□□□ 0.23
PTK7-216ENST00000489707 HOOK3Q86VS8 718 aa16.51■□□□□ 0.23
PTK7-216ENST00000489707 UBR7Q8N806 425 aa16.51■□□□□ 0.23
PTK7-216ENST00000489707 TMEM35BQ8NCS4 154 aa16.51■□□□□ 0.23
PTK7-216ENST00000489707 ZNF606Q8WXB4 792 aa16.51■□□□□ 0.23
PTK7-216ENST00000489707 FAM212AQ96EL1 285 aa16.51■□□□□ 0.23
PTK7-216ENST00000489707 SLC10A4Q96EP9 437 aa16.51■□□□□ 0.23
PTK7-216ENST00000489707 FAM84AQ96KN4 292 aa16.51■□□□□ 0.23
PTK7-216ENST00000489707 NLRP4Q96MN2 994 aa16.51■□□□□ 0.23
PTK7-216ENST00000489707 MTMR12Q9C0I1 747 aa16.51■□□□□ 0.23
PTK7-216ENST00000489707 TNFSF13BQ9Y275 285 aa16.51■□□□□ 0.23
PTK7-216ENST00000489707 COL1A2P08123 1366 aa16.5■□□□□ 0.23
PTK7-216ENST00000489707 H0YGN5 161 aa16.5■□□□□ 0.23
PTK7-216ENST00000489707 ABLIM1O14639 778 aa16.5■□□□□ 0.23
PTK7-216ENST00000489707 GAS8O95995 478 aa16.5■□□□□ 0.23
PTK7-216ENST00000489707 GH1P01241 217 aa16.5■□□□□ 0.23
PTK7-216ENST00000489707 RARAP10276 462 aa16.5■□□□□ 0.23
PTK7-216ENST00000489707 PLTPP55058 493 aa16.5■□□□□ 0.23
PTK7-216ENST00000489707 GNGT1P63211 74 aa16.5■□□□□ 0.23
PTK7-216ENST00000489707 TFAMQ00059 246 aaKnown RBP16.5■□□□□ 0.23
PTK7-216ENST00000489707 PPP1R7Q15435 360 aa16.5■□□□□ 0.23
PTK7-216ENST00000489707 SEZ6Q53EL9 994 aa16.5■□□□□ 0.23
PTK7-216ENST00000489707 KCTD16Q68DU8 428 aa16.5■□□□□ 0.23
PTK7-216ENST00000489707 ARMCX2Q7L311 632 aa16.5■□□□□ 0.23
PTK7-216ENST00000489707 UPF1Q92900 1129 aaKnown RBP eCLIP16.5■□□□□ 0.239e-8■■■■■ 31.4
PTK7-216ENST00000489707 PTPRHQ9HD43 1115 aa16.5■□□□□ 0.23
PTK7-216ENST00000489707 ATP8A1Q9Y2Q0 1164 aa16.5■□□□□ 0.23
PTK7-216ENST00000489707 NFS1Q9Y697 457 aa16.5■□□□□ 0.23
PTK7-216ENST00000489707 IQCA1LA6NCM1 817 aa16.49■□□□□ 0.23
PTK7-216ENST00000489707 EIF3HO15372 352 aaKnown RBP eCLIP16.49■□□□□ 0.233e-7■□□□□ 10.4
PTK7-216ENST00000489707 STRNO43815 780 aa16.49■□□□□ 0.23
PTK7-216ENST00000489707 MMP8P22894 467 aa16.49■□□□□ 0.23
PTK7-216ENST00000489707 TMOD1P28289 359 aa16.49■□□□□ 0.23
PTK7-216ENST00000489707 PMS2P54278 862 aa16.49■□□□□ 0.23
PTK7-216ENST00000489707 MYL6P60660 151 aa16.49■□□□□ 0.23
PTK7-216ENST00000489707 ZNF844Q08AG5 666 aa16.49■□□□□ 0.23
PTK7-216ENST00000489707 MAMLD1Q13495 774 aa16.49■□□□□ 0.23
PTK7-216ENST00000489707 FAM187BQ17R55 369 aa16.49■□□□□ 0.23
PTK7-216ENST00000489707 KATNAL2Q8IYT4 538 aa16.49■□□□□ 0.23
PTK7-216ENST00000489707 FEZF2Q8TBJ5 459 aa16.49■□□□□ 0.23
PTK7-216ENST00000489707 TXLNGYQ9BZA5 131 aa16.49■□□□□ 0.23
PTK7-216ENST00000489707 PABPC3Q9H361 631 aaKnown RBP16.49■□□□□ 0.23
PTK7-216ENST00000489707 RPF1Q9H9Y2 349 aaKnown RBP16.49■□□□□ 0.23
PTK7-216ENST00000489707 CISHQ9NSE2 258 aa16.49■□□□□ 0.23
PTK7-216ENST00000489707 SNX24Q9Y343 169 aa16.49■□□□□ 0.23
PTK7-216ENST00000489707 TLR3O15455 904 aaKnown RBP16.49■□□□□ 0.23
PTK7-216ENST00000489707 MED7O43513 233 aa16.49■□□□□ 0.23
PTK7-216ENST00000489707 CST3P01034 146 aaPredicted RBP16.49■□□□□ 0.23
PTK7-216ENST00000489707 SIX1Q15475 284 aaPredicted RBP16.49■□□□□ 0.23
PTK7-216ENST00000489707 DENND2CQ68D51 928 aa16.49■□□□□ 0.23
PTK7-216ENST00000489707 TTC27Q6P3X3 843 aa16.49■□□□□ 0.23
PTK7-216ENST00000489707 MMS22LQ6ZRQ5 1243 aa16.49■□□□□ 0.23
PTK7-216ENST00000489707 ZNF467Q7Z7K2 595 aaPredicted RBP16.49■□□□□ 0.23
PTK7-216ENST00000489707 PASD1Q8IV76 773 aa16.49■□□□□ 0.23
PTK7-216ENST00000489707 EXD1Q8NHP7 514 aa16.49■□□□□ 0.23
PTK7-216ENST00000489707 EMID1Q96A84 441 aaPredicted RBP16.49■□□□□ 0.23
PTK7-216ENST00000489707 CENPHQ9H3R5 247 aa16.49■□□□□ 0.23
PTK7-216ENST00000489707 STRIP2Q9ULQ0 834 aa16.49■□□□□ 0.23
PTK7-216ENST00000489707 PCDHGC3Q9UN70 934 aa16.49■□□□□ 0.23
PTK7-216ENST00000489707 IVNS1ABPQ9Y6Y0 642 aa16.49■□□□□ 0.23
PTK7-216ENST00000489707 UMODL1Q5DID0 1318 aa16.48■□□□□ 0.23
PTK7-216ENST00000489707 SRRM3A6NNA2 597 aaPredicted RBP16.48■□□□□ 0.23
PTK7-216ENST00000489707 TTLL13PA6NNM8 815 aa16.48■□□□□ 0.23
PTK7-216ENST00000489707 C22orf31O95567 290 aa16.48■□□□□ 0.23
PTK7-216ENST00000489707 CALCAP01258 141 aa16.48■□□□□ 0.23
PTK7-216ENST00000489707 HOXC6P09630 235 aa16.48■□□□□ 0.23
PTK7-216ENST00000489707 NUDT17P0C025 328 aa16.48■□□□□ 0.23
PTK7-216ENST00000489707 CETPP11597 493 aa16.48■□□□□ 0.23
PTK7-216ENST00000489707 EIF4BP23588 611 aaKnown RBP16.48■□□□□ 0.23
PTK7-216ENST00000489707 FLT3P36888 993 aa16.48■□□□□ 0.23
PTK7-216ENST00000489707 RPL21P46778 160 aaKnown RBP16.48■□□□□ 0.23
PTK7-216ENST00000489707 GCLCP48506 637 aaPredicted RBP16.48■□□□□ 0.23
PTK7-216ENST00000489707 CAV1Q03135 178 aa16.48■□□□□ 0.23
PTK7-216ENST00000489707 MBTD1Q05BQ5 628 aa16.48■□□□□ 0.23
PTK7-216ENST00000489707 PNMA8AQ86V59 439 aaPredicted RBP16.48■□□□□ 0.23
PTK7-216ENST00000489707 IFNLR1Q8IU57 520 aaPredicted RBP16.48■□□□□ 0.23
PTK7-216ENST00000489707 CCDC50Q8IVM0 306 aa16.48■□□□□ 0.23
PTK7-216ENST00000489707 THNSL1Q8IYQ7 743 aa16.48■□□□□ 0.23
PTK7-216ENST00000489707 PPTC7Q8NI37 304 aa16.48■□□□□ 0.23
PTK7-216ENST00000489707 DDX27Q96GQ7 796 aaKnown RBP16.48■□□□□ 0.23
PTK7-216ENST00000489707 WHRNQ9P202 907 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms