RNA–Protein interactions for RNA: ENST00000489705.2

HNRNPU-211, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 3

Gene HNRNPU, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-211ENST00000489705 PDLIM2Q96JY6 352 aa6.56□□□□□ -1.36
HNRNPU-211ENST00000489705 CLPTM1LQ96KA5 538 aa6.56□□□□□ -1.36
HNRNPU-211ENST00000489705 ALG13Q9NP73 1137 aaKnown RBP6.56□□□□□ -1.36
HNRNPU-211ENST00000489705 POLHQ9Y253 713 aa6.56□□□□□ -1.36
HNRNPU-211ENST00000489705 CCDC78A2IDD5 438 aa6.55□□□□□ -1.36
HNRNPU-211ENST00000489705 PEX1O43933 1283 aa6.55□□□□□ -1.36
HNRNPU-211ENST00000489705 FOLR3P41439 243 aa6.55□□□□□ -1.36
HNRNPU-211ENST00000489705 ANXA11P50995 505 aaKnown RBP6.55□□□□□ -1.36
HNRNPU-211ENST00000489705 CACNA2D1P54289 1103 aa6.55□□□□□ -1.36
HNRNPU-211ENST00000489705 HLXQ14774 488 aaPredicted RBP6.55□□□□□ -1.36
HNRNPU-211ENST00000489705 CCDC142Q17RM4 750 aa6.55□□□□□ -1.36
HNRNPU-211ENST00000489705 GEN1Q17RS7 908 aa6.55□□□□□ -1.36
HNRNPU-211ENST00000489705 C3orf36Q3SXR2 165 aa6.55□□□□□ -1.36
HNRNPU-211ENST00000489705 KIAA0895LQ68EN5 471 aa6.55□□□□□ -1.36
HNRNPU-211ENST00000489705 RD3Q7Z3Z2 195 aa6.55□□□□□ -1.36
HNRNPU-211ENST00000489705 MIER2Q8N344 545 aa6.55□□□□□ -1.36
HNRNPU-211ENST00000489705 ACTRT2Q8TDY3 377 aa6.55□□□□□ -1.36
HNRNPU-211ENST00000489705 SSH3Q8TE77 659 aa6.55□□□□□ -1.36
HNRNPU-211ENST00000489705 FOXJ2Q9P0K8 574 aa6.55□□□□□ -1.36
HNRNPU-211ENST00000489705 SLC17A6Q9P2U8 582 aa6.55□□□□□ -1.36
HNRNPU-211ENST00000489705 WASHC2CQ9Y4E1 1318 aa6.54□□□□□ -1.36
HNRNPU-211ENST00000489705 COL11A2P13942 1736 aaPredicted RBP6.54□□□□□ -1.36
HNRNPU-211ENST00000489705 CCDC195A0A1B0GUA6 201 aa6.54□□□□□ -1.36
HNRNPU-211ENST00000489705 MPPED1O15442 326 aa6.54□□□□□ -1.36
HNRNPU-211ENST00000489705 KATNA1O75449 491 aa6.54□□□□□ -1.36
HNRNPU-211ENST00000489705 CHEK2O96017 543 aa6.54□□□□□ -1.36
HNRNPU-211ENST00000489705 C1RP00736 705 aa6.54□□□□□ -1.36
HNRNPU-211ENST00000489705 RECQLP46063 649 aaPredicted RBP6.54□□□□□ -1.36
HNRNPU-211ENST00000489705 SIM1P81133 766 aaPredicted RBP6.54□□□□□ -1.36
HNRNPU-211ENST00000489705 PCBP2Q15366 365 aaKnown RBP eCLIP6.54□□□□□ -1.36
HNRNPU-211ENST00000489705 TMEM240Q5SV17 173 aa6.54□□□□□ -1.36
HNRNPU-211ENST00000489705 VOPP1Q96AW1 172 aa6.54□□□□□ -1.36
HNRNPU-211ENST00000489705 KRTAP17-1Q9BYP8 105 aa6.54□□□□□ -1.36
HNRNPU-211ENST00000489705 SIK2Q9H0K1 926 aa6.54□□□□□ -1.36
HNRNPU-211ENST00000489705 PCDHB1Q9Y5F3 818 aa6.54□□□□□ -1.36
HNRNPU-211ENST00000489705 COL4A3BPQ9Y5P4 624 aa6.54□□□□□ -1.36
HNRNPU-211ENST00000489705 PROP1O75360 226 aa6.53□□□□□ -1.36
HNRNPU-211ENST00000489705 SOAT2O75908 522 aa6.53□□□□□ -1.36
HNRNPU-211ENST00000489705 ZFPL1O95159 310 aa6.53□□□□□ -1.36
HNRNPU-211ENST00000489705 GNAI3P08754 354 aa6.53□□□□□ -1.36
HNRNPU-211ENST00000489705 CCND1P24385 295 aa6.53□□□□□ -1.36
HNRNPU-211ENST00000489705 ZNF280AP59817 542 aaPredicted RBP6.53□□□□□ -1.36
HNRNPU-211ENST00000489705 GNAI1P63096 354 aa6.53□□□□□ -1.36
HNRNPU-211ENST00000489705 IL10RAQ13651 578 aa6.53□□□□□ -1.36
HNRNPU-211ENST00000489705 PTPN21Q16825 1174 aa6.53□□□□□ -1.36
HNRNPU-211ENST00000489705 UAP1L1Q3KQV9 507 aa6.53□□□□□ -1.36
HNRNPU-211ENST00000489705 FBXO42Q6P3S6 717 aa6.53□□□□□ -1.36
HNRNPU-211ENST00000489705 VWA1Q6PCB0 445 aa6.53□□□□□ -1.36
HNRNPU-211ENST00000489705 MICALCLQ6ZW33 695 aa6.53□□□□□ -1.36
HNRNPU-211ENST00000489705 SCAMP4Q969E2 229 aa6.53□□□□□ -1.36
HNRNPU-211ENST00000489705 KLHL32Q96NJ5 620 aa6.53□□□□□ -1.36
HNRNPU-211ENST00000489705 DMRTA2Q96SC8 542 aa6.53□□□□□ -1.36
HNRNPU-211ENST00000489705 CCDC8Q9H0W5 538 aaPredicted RBP6.53□□□□□ -1.36
HNRNPU-211ENST00000489705 PCDH12Q9NPG4 1184 aa6.53□□□□□ -1.36
HNRNPU-211ENST00000489705 CTTNBP2NLQ9P2B4 639 aa6.53□□□□□ -1.36
HNRNPU-211ENST00000489705 CFAP97Q9P2B7 532 aa6.53□□□□□ -1.36
HNRNPU-211ENST00000489705 CDYLQ9Y232 598 aa6.53□□□□□ -1.36
HNRNPU-211ENST00000489705 TNKSO95271 1327 aa6.52□□□□□ -1.37
HNRNPU-211ENST00000489705 SPATA31A3Q5VYP0 1347 aa6.52□□□□□ -1.37
HNRNPU-211ENST00000489705 SBK3P0C264 359 aa6.52□□□□□ -1.37
HNRNPU-211ENST00000489705 VCAM1P19320 739 aa6.52□□□□□ -1.37
HNRNPU-211ENST00000489705 NHLH1Q02575 133 aa6.52□□□□□ -1.37
HNRNPU-211ENST00000489705 DYRK1AQ13627 763 aa6.52□□□□□ -1.37
HNRNPU-211ENST00000489705 SLC4A10Q6U841 1118 aa6.52□□□□□ -1.37
HNRNPU-211ENST00000489705 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.52□□□□□ -1.37
HNRNPU-211ENST00000489705 TMPRSS9Q7Z410 1059 aa6.52□□□□□ -1.37
HNRNPU-211ENST00000489705 GRASPQ7Z6J2 395 aaPredicted RBP6.52□□□□□ -1.37
HNRNPU-211ENST00000489705 FAM98AQ8NCA5 519 aaKnown RBP6.52□□□□□ -1.37
HNRNPU-211ENST00000489705 C3orf20Q8ND61 904 aa6.52□□□□□ -1.37
HNRNPU-211ENST00000489705 PGBD1Q96JS3 809 aa6.52□□□□□ -1.37
HNRNPU-211ENST00000489705 FAM167AQ96KS9 214 aa6.52□□□□□ -1.37
HNRNPU-211ENST00000489705 TLR10Q9BXR5 811 aa6.52□□□□□ -1.37
HNRNPU-211ENST00000489705 ASPSCR1Q9BZE9 553 aa6.52□□□□□ -1.37
HNRNPU-211ENST00000489705 R3HDMLQ9H3Y0 253 aa6.52□□□□□ -1.37
HNRNPU-211ENST00000489705 WDCPQ9H6R7 721 aa6.52□□□□□ -1.37
HNRNPU-211ENST00000489705 SEMA4GQ9NTN9 838 aa6.52□□□□□ -1.37
HNRNPU-211ENST00000489705 SPATA31A6Q5VVP1 1343 aa6.51□□□□□ -1.37
HNRNPU-211ENST00000489705 YY2O15391 372 aa6.51□□□□□ -1.37
HNRNPU-211ENST00000489705 MALP21145 153 aa6.51□□□□□ -1.37
HNRNPU-211ENST00000489705 SOX10P56693 466 aa6.51□□□□□ -1.37
HNRNPU-211ENST00000489705 C21orf58P58505 322 aa6.51□□□□□ -1.37
HNRNPU-211ENST00000489705 FPGSQ05932 587 aa6.51□□□□□ -1.37
HNRNPU-211ENST00000489705 PTPRRQ15256 657 aa6.51□□□□□ -1.37
HNRNPU-211ENST00000489705 SF3B3Q15393 1217 aaKnown RBP6.51□□□□□ -1.37
HNRNPU-211ENST00000489705 PREPLQ4J6C6 727 aaPredicted RBP6.51□□□□□ -1.37
HNRNPU-211ENST00000489705 CFAP52Q8N1V2 620 aa6.51□□□□□ -1.37
HNRNPU-211ENST00000489705 BOLLQ8N9W6 283 aaKnown RBP6.51□□□□□ -1.37
HNRNPU-211ENST00000489705 SNX19Q92543 992 aa6.51□□□□□ -1.37
HNRNPU-211ENST00000489705 SMOQ99835 787 aa6.51□□□□□ -1.37
HNRNPU-211ENST00000489705 PRDM13Q9H4Q3 707 aa6.51□□□□□ -1.37
HNRNPU-211ENST00000489705 NT5C1B-RDH14C9J2C7 533 aa6.5□□□□□ -1.37
HNRNPU-211ENST00000489705 SNUPNO95149 360 aaKnown RBP6.5□□□□□ -1.37
HNRNPU-211ENST00000489705 NXPH1P58417 271 aa6.5□□□□□ -1.37
HNRNPU-211ENST00000489705 MRPS21P82921 87 aaKnown RBP6.5□□□□□ -1.37
HNRNPU-211ENST00000489705 DSC2Q02487 901 aa6.5□□□□□ -1.37
HNRNPU-211ENST00000489705 ITIH3Q06033 890 aa6.5□□□□□ -1.37
HNRNPU-211ENST00000489705 FAM50AQ14320 339 aaKnown RBP6.5□□□□□ -1.37
HNRNPU-211ENST00000489705 FLYWCH1Q4VC44 716 aa6.5□□□□□ -1.37
HNRNPU-211ENST00000489705 CCDC93Q567U6 631 aa6.5□□□□□ -1.37
HNRNPU-211ENST00000489705 DDX17Q92841 729 aaKnown RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms