RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 TMC6Q7Z403 805 aa15.31■□□□□ 0.04
CLDN11-209ENST00000489485 TMEM173Q86WV6 379 aaPredicted RBP15.31■□□□□ 0.04
CLDN11-209ENST00000489485 VSTM4Q8IW00 320 aa15.31■□□□□ 0.04
CLDN11-209ENST00000489485 LRRC52Q8N7C0 313 aa15.31■□□□□ 0.04
CLDN11-209ENST00000489485 SPC24Q8NBT2 197 aa15.31■□□□□ 0.04
CLDN11-209ENST00000489485 SEMA4DQ92854 862 aa15.31■□□□□ 0.04
CLDN11-209ENST00000489485 ERGIC2Q96RQ1 377 aa15.31■□□□□ 0.04
CLDN11-209ENST00000489485 C17orf80Q9BSJ5 609 aa15.31■□□□□ 0.04
CLDN11-209ENST00000489485 ADAM28Q9UKQ2 775 aa15.31■□□□□ 0.04
CLDN11-209ENST00000489485 COQ4Q9Y3A0 265 aa15.31■□□□□ 0.04
CLDN11-209ENST00000489485 CHD9Q3L8U1 2897 aa15.31■□□□□ 0.04
CLDN11-209ENST00000489485 MYO9BQ13459 2157 aa15.31■□□□□ 0.04
CLDN11-209ENST00000489485 A0A1W2PQC6 194 aa15.31■□□□□ 0.04
CLDN11-209ENST00000489485 GTPBP10A4D1E9 387 aaKnown RBP15.31■□□□□ 0.04
CLDN11-209ENST00000489485 PMM2O15305 246 aa15.31■□□□□ 0.04
CLDN11-209ENST00000489485 LINC00271P0C7V0 271 aa15.31■□□□□ 0.04
CLDN11-209ENST00000489485 CTNNB1P35222 781 aa15.31■□□□□ 0.04
CLDN11-209ENST00000489485 SMAD3P84022 425 aaKnown RBP15.31■□□□□ 0.04
CLDN11-209ENST00000489485 APBA1Q02410 837 aa15.31■□□□□ 0.04
CLDN11-209ENST00000489485 WDR72Q3MJ13 1102 aa15.31■□□□□ 0.04
CLDN11-209ENST00000489485 SV2CQ496J9 727 aa15.31■□□□□ 0.04
CLDN11-209ENST00000489485 SPRED2Q7Z698 418 aa15.31■□□□□ 0.04
CLDN11-209ENST00000489485 TMEM169Q96HH4 297 aa15.31■□□□□ 0.04
CLDN11-209ENST00000489485 IGSF21Q96ID5 467 aa15.31■□□□□ 0.04
CLDN11-209ENST00000489485 FAM207AQ9NSI2 230 aaPredicted RBP15.31■□□□□ 0.04
CLDN11-209ENST00000489485 MARCH5Q9NX47 278 aa15.31■□□□□ 0.04
CLDN11-209ENST00000489485 SIK3Q9Y2K2 1263 aa15.31■□□□□ 0.04
CLDN11-209ENST00000489485 RWDD3Q9Y3V2 267 aa15.31■□□□□ 0.04
CLDN11-209ENST00000489485 CARNS1A5YM72 827 aa15.3■□□□□ 0.04
CLDN11-209ENST00000489485 KPNA7A9QM74 516 aa15.3■□□□□ 0.04
CLDN11-209ENST00000489485 I3L4J1 428 aa15.3■□□□□ 0.04
CLDN11-209ENST00000489485 SPTLC1O15269 473 aa15.3■□□□□ 0.04
CLDN11-209ENST00000489485 PON1P27169 355 aa15.3■□□□□ 0.04
CLDN11-209ENST00000489485 ATICP31939 592 aa15.3■□□□□ 0.04
CLDN11-209ENST00000489485 PPM1AP35813 382 aa15.3■□□□□ 0.04
CLDN11-209ENST00000489485 BMPR1AP36894 532 aa15.3■□□□□ 0.04
CLDN11-209ENST00000489485 BRCC3P46736 316 aa15.3■□□□□ 0.04
CLDN11-209ENST00000489485 TAP1Q03518 808 aa15.3■□□□□ 0.04
CLDN11-209ENST00000489485 LRMPQ12912 555 aa15.3■□□□□ 0.04
CLDN11-209ENST00000489485 EPC2Q52LR7 807 aa15.3■□□□□ 0.04
CLDN11-209ENST00000489485 WDR44Q5JSH3 913 aa15.3■□□□□ 0.04
CLDN11-209ENST00000489485 SPECC1LQ69YQ0 1117 aa15.3■□□□□ 0.04
CLDN11-209ENST00000489485 SPOPLQ6IQ16 392 aa15.3■□□□□ 0.04
CLDN11-209ENST00000489485 XYLT2Q9H1B5 865 aa15.3■□□□□ 0.04
CLDN11-209ENST00000489485 CERS4Q9HA82 394 aa15.3■□□□□ 0.04
CLDN11-209ENST00000489485 SPG21Q9NZD8 308 aa15.3■□□□□ 0.04
CLDN11-209ENST00000489485 NXF1Q9UBU9 619 aaKnown RBP15.3■□□□□ 0.04
CLDN11-209ENST00000489485 SNX9Q9Y5X1 595 aa15.3■□□□□ 0.04
CLDN11-209ENST00000489485 CHD7Q9P2D1 2997 aa15.29■□□□□ 0.04
CLDN11-209ENST00000489485 TMEM189-UBE2V1I3L0A0 370 aa15.29■□□□□ 0.04
CLDN11-209ENST00000489485 TRAPPC3O43617 180 aa15.29■□□□□ 0.04
CLDN11-209ENST00000489485 ASS1P00966 412 aaKnown RBP15.29■□□□□ 0.04
CLDN11-209ENST00000489485 NOP14P78316 857 aaKnown RBP15.29■□□□□ 0.04
CLDN11-209ENST00000489485 LRIT3Q3SXY7 679 aa15.29■□□□□ 0.04
CLDN11-209ENST00000489485 TIGD5Q53EQ6 642 aa15.29■□□□□ 0.04
CLDN11-209ENST00000489485 ZNF667Q5HYK9 610 aa15.29■□□□□ 0.04
CLDN11-209ENST00000489485 TRIM65Q6PJ69 517 aa15.29■□□□□ 0.04
CLDN11-209ENST00000489485 DSTYKQ6XUX3 929 aa15.29■□□□□ 0.04
CLDN11-209ENST00000489485 SLC39A11Q8N1S5 342 aa15.29■□□□□ 0.04
CLDN11-209ENST00000489485 KLHL23Q8NBE8 558 aa15.29■□□□□ 0.04
CLDN11-209ENST00000489485 EHBP1Q8NDI1 1231 aa15.29■□□□□ 0.04
CLDN11-209ENST00000489485 BCL7CQ8WUZ0 217 aaPredicted RBP15.29■□□□□ 0.04
CLDN11-209ENST00000489485 TIFAQ96CG3 184 aa15.29■□□□□ 0.04
CLDN11-209ENST00000489485 TGS1Q96RS0 853 aaKnown RBP15.29■□□□□ 0.04
CLDN11-209ENST00000489485 MMS19Q96T76 1030 aa15.29■□□□□ 0.04
CLDN11-209ENST00000489485 FGF18O76093 207 aa15.29■□□□□ 0.04
CLDN11-209ENST00000489485 TRIM21P19474 475 aaKnown RBP15.29■□□□□ 0.04
CLDN11-209ENST00000489485 CDC25BP30305 580 aa15.29■□□□□ 0.04
CLDN11-209ENST00000489485 TNNC1P63316 161 aa15.29■□□□□ 0.04
CLDN11-209ENST00000489485 KRT17Q04695 432 aa15.29■□□□□ 0.04
CLDN11-209ENST00000489485 CD300LGQ6UXG3 332 aa15.29■□□□□ 0.04
CLDN11-209ENST00000489485 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.29■□□□□ 0.04
CLDN11-209ENST00000489485 LMO3Q8TAP4 145 aa15.29■□□□□ 0.04
CLDN11-209ENST00000489485 TAF4BQ92750 862 aa15.29■□□□□ 0.04
CLDN11-209ENST00000489485 LSM14BQ9BX40 385 aaKnown RBP15.29■□□□□ 0.04
CLDN11-209ENST00000489485 INTS2Q9H0H0 1204 aaKnown RBP15.29■□□□□ 0.04
CLDN11-209ENST00000489485 SF3B1O75533 1304 aaKnown RBP eCLIP15.29■□□□□ 0.04
CLDN11-209ENST00000489485 EPHB6O15197 1021 aa15.28■□□□□ 0.04
CLDN11-209ENST00000489485 FUT10Q6P4F1 479 aa15.28■□□□□ 0.04
CLDN11-209ENST00000489485 CPLX3Q8WVH0 158 aa15.28■□□□□ 0.04
CLDN11-209ENST00000489485 SENP8Q96LD8 212 aa15.28■□□□□ 0.04
CLDN11-209ENST00000489485 NT5C1BQ96P26 610 aa15.28■□□□□ 0.04
CLDN11-209ENST00000489485 PLVAPQ9BX97 442 aa15.28■□□□□ 0.04
CLDN11-209ENST00000489485 GPR62Q9BZJ7 368 aa15.28■□□□□ 0.04
CLDN11-209ENST00000489485 PLXNA4Q9HCM2 1894 aa15.28■□□□□ 0.04
CLDN11-209ENST00000489485 CYB561D2O14569 222 aa15.27■□□□□ 0.04
CLDN11-209ENST00000489485 HUS1O60921 280 aa15.27■□□□□ 0.04
CLDN11-209ENST00000489485 STAU1O95793 577 aaKnown RBP15.27■□□□□ 0.04
CLDN11-209ENST00000489485 P4HA1P13674 534 aa15.27■□□□□ 0.04
CLDN11-209ENST00000489485 ERVK-21P61565 698 aa15.27■□□□□ 0.04
CLDN11-209ENST00000489485 FAM171A1Q5VUB5 890 aa15.27■□□□□ 0.04
CLDN11-209ENST00000489485 SCARA5Q6ZMJ2 495 aa15.27■□□□□ 0.04
CLDN11-209ENST00000489485 CEP57Q86XR8 500 aa15.27■□□□□ 0.04
CLDN11-209ENST00000489485 PPM1KQ8N3J5 372 aa15.27■□□□□ 0.04
CLDN11-209ENST00000489485 NEK11Q8NG66 645 aa15.27■□□□□ 0.04
CLDN11-209ENST00000489485 ARNTL2Q8WYA1 636 aa15.27■□□□□ 0.04
CLDN11-209ENST00000489485 TATDN2Q93075 761 aa15.27■□□□□ 0.04
CLDN11-209ENST00000489485 SAMD11Q96NU1 681 aa15.27■□□□□ 0.04
CLDN11-209ENST00000489485 VRTNQ9H8Y1 702 aa15.27■□□□□ 0.04
CLDN11-209ENST00000489485 APOBEC3GQ9HC16 384 aaKnown RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms