RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 Q9Y3F1 56 aa9.07□□□□□ -0.96
VTI1A-207ENST00000489357 A0A0B4J269 797 aa9.06□□□□□ -0.96
VTI1A-207ENST00000489357 ZBBXA8MT70 800 aa9.06□□□□□ -0.96
VTI1A-207ENST00000489357 ANKRD63C9JTQ0 380 aa9.06□□□□□ -0.96
VTI1A-207ENST00000489357 K7ERI5 159 aa9.06□□□□□ -0.96
VTI1A-207ENST00000489357 ASAP2O43150 1006 aa9.06□□□□□ -0.96
VTI1A-207ENST00000489357 NCK2O43639 380 aa9.06□□□□□ -0.96
VTI1A-207ENST00000489357 OPA1O60313 960 aa9.06□□□□□ -0.96
VTI1A-207ENST00000489357 DUSP11O75319 330 aaKnown RBP9.06□□□□□ -0.96
VTI1A-207ENST00000489357 TFRCP02786 760 aaKnown RBP9.06□□□□□ -0.96
VTI1A-207ENST00000489357 COL6A1P12109 1028 aa9.06□□□□□ -0.96
VTI1A-207ENST00000489357 UBA1P22314 1058 aaKnown RBP9.06□□□□□ -0.96
VTI1A-207ENST00000489357 CXCR5P32302 372 aa9.06□□□□□ -0.96
VTI1A-207ENST00000489357 STAT5BP51692 787 aa9.06□□□□□ -0.96
VTI1A-207ENST00000489357 PRPF4BQ13523 1007 aaKnown RBP9.06□□□□□ -0.96
VTI1A-207ENST00000489357 ENOX2Q16206 610 aaKnown RBP9.06□□□□□ -0.96
VTI1A-207ENST00000489357 ZACNQ401N2 412 aa9.06□□□□□ -0.96
VTI1A-207ENST00000489357 WDR44Q5JSH3 913 aa9.06□□□□□ -0.96
VTI1A-207ENST00000489357 IER5Q5VY09 327 aa9.06□□□□□ -0.96
VTI1A-207ENST00000489357 IQSEC1Q6DN90 963 aa9.06□□□□□ -0.96
VTI1A-207ENST00000489357 CCSAPQ6IQ19 270 aaPredicted RBP9.06□□□□□ -0.96
VTI1A-207ENST00000489357 SLC39A4Q6P5W5 647 aa9.06□□□□□ -0.96
VTI1A-207ENST00000489357 CCDC62Q6P9F0 684 aa9.06□□□□□ -0.96
VTI1A-207ENST00000489357 SV2AQ7L0J3 742 aa9.06□□□□□ -0.96
VTI1A-207ENST00000489357 CYFIP1Q7L576 1253 aa9.06□□□□□ -0.96
VTI1A-207ENST00000489357 PPM1KQ8N3J5 372 aa9.06□□□□□ -0.96
VTI1A-207ENST00000489357 KLHDC9Q8NEP7 349 aa9.06□□□□□ -0.96
VTI1A-207ENST00000489357 HELQQ8TDG4 1101 aa9.06□□□□□ -0.96
VTI1A-207ENST00000489357 BSNDQ8WZ55 320 aa9.06□□□□□ -0.96
VTI1A-207ENST00000489357 SEC14L1Q92503 715 aa9.06□□□□□ -0.96
VTI1A-207ENST00000489357 BICD1Q96G01 975 aa9.06□□□□□ -0.96
VTI1A-207ENST00000489357 VCPIP1Q96JH7 1222 aa9.06□□□□□ -0.96
VTI1A-207ENST00000489357 DEFB118Q96PH6 123 aa9.06□□□□□ -0.96
VTI1A-207ENST00000489357 FNBP1Q96RU3 617 aa9.06□□□□□ -0.96
VTI1A-207ENST00000489357 ARID3AQ99856 593 aa9.06□□□□□ -0.96
VTI1A-207ENST00000489357 NFKBIZQ9BYH8 718 aa9.06□□□□□ -0.96
VTI1A-207ENST00000489357 ZMYND15Q9H091 742 aa9.06□□□□□ -0.96
VTI1A-207ENST00000489357 UPF3AQ9H1J1 476 aaKnown RBP9.06□□□□□ -0.96
VTI1A-207ENST00000489357 WNT8AQ9H1J5 351 aa9.06□□□□□ -0.96
VTI1A-207ENST00000489357 IKZF4Q9H2S9 585 aa9.06□□□□□ -0.96
VTI1A-207ENST00000489357 FAM124BQ9H5Z6 455 aaPredicted RBP9.06□□□□□ -0.96
VTI1A-207ENST00000489357 AVENQ9NQS1 362 aaPredicted RBP9.06□□□□□ -0.96
VTI1A-207ENST00000489357 AGO2Q9UKV8 859 aaKnown RBP9.06□□□□□ -0.96
VTI1A-207ENST00000489357 HPCAL4Q9UM19 191 aa9.06□□□□□ -0.96
VTI1A-207ENST00000489357 PCDHB2Q9Y5E7 798 aa9.06□□□□□ -0.96
VTI1A-207ENST00000489357 DOCK5Q9H7D0 1870 aa9.06□□□□□ -0.96
VTI1A-207ENST00000489357 MKI67P46013 3256 aaKnown RBP9.06□□□□□ -0.96
VTI1A-207ENST00000489357 ADGRA3Q8IWK6 1321 aa9.05□□□□□ -0.96
VTI1A-207ENST00000489357 CEP290O15078 2479 aa9.05□□□□□ -0.96
VTI1A-207ENST00000489357 SCN10AQ9Y5Y9 1956 aa9.05□□□□□ -0.96
VTI1A-207ENST00000489357 GSTTP1A0A1W2PQM5 241 aa9.05□□□□□ -0.96
VTI1A-207ENST00000489357 CCDC66A2RUB6 948 aa9.05□□□□□ -0.96
VTI1A-207ENST00000489357 TMEM150BA6NC51 233 aa9.05□□□□□ -0.96
VTI1A-207ENST00000489357 GOLGA6BA6NDN3 693 aa9.05□□□□□ -0.96
VTI1A-207ENST00000489357 TMCO5BA8MYB1 307 aa9.05□□□□□ -0.96
VTI1A-207ENST00000489357 BUB1BO60566 1050 aaPredicted RBP9.05□□□□□ -0.96
VTI1A-207ENST00000489357 ADAMTS4O75173 837 aa9.05□□□□□ -0.96
VTI1A-207ENST00000489357 HEXIM1O94992 359 aaKnown RBP9.05□□□□□ -0.96
VTI1A-207ENST00000489357 FTLP02792 175 aaPredicted RBP9.05□□□□□ -0.96
VTI1A-207ENST00000489357 CYP1A2P05177 515 aa9.05□□□□□ -0.96
VTI1A-207ENST00000489357 AKR1A1P14550 325 aa9.05□□□□□ -0.96
VTI1A-207ENST00000489357 CYP11B1P15538 503 aa9.05□□□□□ -0.96
VTI1A-207ENST00000489357 GLRA2P23416 452 aa9.05□□□□□ -0.96
VTI1A-207ENST00000489357 VARSP26640 1264 aaKnown RBP9.05□□□□□ -0.96
VTI1A-207ENST00000489357 CST5P28325 142 aaPredicted RBP9.05□□□□□ -0.96
VTI1A-207ENST00000489357 TNNT3P45378 269 aaPredicted RBP9.05□□□□□ -0.96
VTI1A-207ENST00000489357 GJA9P57773 515 aa9.05□□□□□ -0.96
VTI1A-207ENST00000489357 PPFIA1Q13136 1202 aa9.05□□□□□ -0.96
VTI1A-207ENST00000489357 DHX34Q14147 1143 aaKnown RBP9.05□□□□□ -0.96
VTI1A-207ENST00000489357 TFDP1Q14186 410 aa9.05□□□□□ -0.96
VTI1A-207ENST00000489357 ARHGAP44Q17R89 818 aa9.05□□□□□ -0.96
VTI1A-207ENST00000489357 MTERF2Q49AM1 385 aa9.05□□□□□ -0.96
VTI1A-207ENST00000489357 CDCA2Q69YH5 1023 aaPredicted RBP9.05□□□□□ -0.96
VTI1A-207ENST00000489357 TAS1R3Q7RTX0 852 aa9.05□□□□□ -0.96
VTI1A-207ENST00000489357 ZBTB33Q86T24 672 aa9.05□□□□□ -0.96
VTI1A-207ENST00000489357 ARHGEF19Q8IW93 802 aa9.05□□□□□ -0.96
VTI1A-207ENST00000489357 METTL13Q8N6R0 699 aa9.05□□□□□ -0.96
VTI1A-207ENST00000489357 PLEKHO2Q8TD55 490 aa9.05□□□□□ -0.96
VTI1A-207ENST00000489357 ATP8B4Q8TF62 1192 aa9.05□□□□□ -0.96
VTI1A-207ENST00000489357 CGRRF1Q99675 332 aa9.05□□□□□ -0.96
VTI1A-207ENST00000489357 RAB17Q9H0T7 212 aa9.05□□□□□ -0.96
VTI1A-207ENST00000489357 PDE11AQ9HCR9 933 aa9.05□□□□□ -0.96
VTI1A-207ENST00000489357 PDGFCQ9NRA1 345 aa9.05□□□□□ -0.96
VTI1A-207ENST00000489357 DMGDHQ9UI17 866 aaKnown RBP9.05□□□□□ -0.96
VTI1A-207ENST00000489357 CNTN6Q9UQ52 1028 aa9.05□□□□□ -0.96
VTI1A-207ENST00000489357 IGKV6-21A0A0C4DH24 114 aa9.04□□□□□ -0.96
VTI1A-207ENST00000489357 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.04□□□□□ -0.96
VTI1A-207ENST00000489357 FAM187AA6NFU0 413 aa9.04□□□□□ -0.96
VTI1A-207ENST00000489357 TISP43B9A030 160 aa9.04□□□□□ -0.96
VTI1A-207ENST00000489357 GOLGA8KD6RF30 607 aa9.04□□□□□ -0.96
VTI1A-207ENST00000489357 KRIT1O00522 736 aa9.04□□□□□ -0.96
VTI1A-207ENST00000489357 CEP104O60308 925 aa9.04□□□□□ -0.96
VTI1A-207ENST00000489357 LRRN2O75325 713 aa9.04□□□□□ -0.96
VTI1A-207ENST00000489357 TOM1L1O75674 476 aa9.04□□□□□ -0.96
VTI1A-207ENST00000489357 SMPD1P17405 629 aa9.04□□□□□ -0.96
VTI1A-207ENST00000489357 ATP4AP20648 1035 aa9.04□□□□□ -0.96
VTI1A-207ENST00000489357 CTNNA2P26232 953 aa9.04□□□□□ -0.96
VTI1A-207ENST00000489357 SLC1A1P43005 524 aa9.04□□□□□ -0.96
VTI1A-207ENST00000489357 DRG2P55039 364 aaKnown RBP9.04□□□□□ -0.96
VTI1A-207ENST00000489357 PTENP60484 403 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms